RNA–Protein interactions for RNA: ENST00000441439.6

LMO3-208, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO3, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-208ENST00000441439 NEK4P51957 841 aa9.44□□□□□ -0.9
LMO3-208ENST00000441439 PDE1AP54750 535 aa9.44□□□□□ -0.9
LMO3-208ENST00000441439 JARID2Q92833 1246 aaPredicted RBP9.44□□□□□ -0.9
LMO3-208ENST00000441439 ATP6V1DQ9Y5K8 247 aa9.44□□□□□ -0.9
LMO3-208ENST00000441439 ELP1O95163 1332 aa9.44□□□□□ -0.9
LMO3-208ENST00000441439 PARP4Q9UKK3 1724 aaKnown RBP9.44□□□□□ -0.9
LMO3-208ENST00000441439 ZSCAN22P10073 491 aaPredicted RBP9.44□□□□□ -0.9
LMO3-208ENST00000441439 TERF2Q15554 542 aa9.44□□□□□ -0.9
LMO3-208ENST00000441439 KIF18AQ8NI77 898 aa9.44□□□□□ -0.9
LMO3-208ENST00000441439 SRCIN1Q9C0H9 1055 aa9.44□□□□□ -0.9
LMO3-208ENST00000441439 MSH6P52701 1360 aa9.44□□□□□ -0.9
LMO3-208ENST00000441439 AP5Z1O43299 807 aa9.44□□□□□ -0.9
LMO3-208ENST00000441439 IDI1Q13907 227 aa9.44□□□□□ -0.9
LMO3-208ENST00000441439 TTC14Q96N46 770 aa9.44□□□□□ -0.9
LMO3-208ENST00000441439 TSPYL1Q9H0U9 437 aa9.44□□□□□ -0.9
LMO3-208ENST00000441439 TMEM2Q9UHN6 1383 aa9.43□□□□□ -0.9
LMO3-208ENST00000441439 HSPA4P34932 840 aa9.43□□□□□ -0.9
LMO3-208ENST00000441439 PDE4CQ08493 712 aa9.43□□□□□ -0.9
LMO3-208ENST00000441439 C16orf71Q8IYS4 520 aaPredicted RBP9.43□□□□□ -0.9
LMO3-208ENST00000441439 TSC1Q92574 1164 aa9.43□□□□□ -0.9
LMO3-208ENST00000441439 PLA2G4DQ86XP0 818 aa9.43□□□□□ -0.9
LMO3-208ENST00000441439 SLIT3O75094 1523 aa9.43□□□□□ -0.9
LMO3-208ENST00000441439 LTN1O94822 1766 aa9.43□□□□□ -0.9
LMO3-208ENST00000441439 XIRP1Q702N8 1843 aaKnown RBP9.43□□□□□ -0.9
LMO3-208ENST00000441439 HMMRO75330 724 aa9.43□□□□□ -0.9
LMO3-208ENST00000441439 PRKAR2BP31323 418 aa9.43□□□□□ -0.9
LMO3-208ENST00000441439 IL13P35225 146 aa9.43□□□□□ -0.9
LMO3-208ENST00000441439 RNF20Q5VTR2 975 aa9.43□□□□□ -0.9
LMO3-208ENST00000441439 CAVIN2O95810 425 aa9.42□□□□□ -0.9
LMO3-208ENST00000441439 HCLS1P14317 486 aaPredicted RBP9.42□□□□□ -0.9
LMO3-208ENST00000441439 OTUD7AQ8TE49 926 aaPredicted RBP9.42□□□□□ -0.9
LMO3-208ENST00000441439 ZNF830Q96NB3 372 aaPredicted RBP9.42□□□□□ -0.9
LMO3-208ENST00000441439 CHMLP26374 656 aa9.42□□□□□ -0.9
LMO3-208ENST00000441439 ZNF397Q8NF99 534 aaPredicted RBP9.42□□□□□ -0.9
LMO3-208ENST00000441439 FAM200AQ8TCP9 573 aa9.42□□□□□ -0.9
LMO3-208ENST00000441439 RBM6P78332 1123 aaKnown RBP9.42□□□□□ -0.9
LMO3-208ENST00000441439 KRT222Q8N1A0 295 aa9.42□□□□□ -0.9
LMO3-208ENST00000441439 KCNB2Q92953 911 aa9.42□□□□□ -0.9
LMO3-208ENST00000441439 KIF1BPQ96EK5 621 aa9.42□□□□□ -0.9
LMO3-208ENST00000441439 CHAMP1Q96JM3 812 aa9.42□□□□□ -0.9
LMO3-208ENST00000441439 NEMFO60524 1076 aa9.41□□□□□ -0.9
LMO3-208ENST00000441439 F13A1P00488 732 aa9.41□□□□□ -0.9
LMO3-208ENST00000441439 C8orf58Q8NAV2 365 aa9.41□□□□□ -0.9
LMO3-208ENST00000441439 POLKQ9UBT6 870 aa9.41□□□□□ -0.9
LMO3-208ENST00000441439 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.41□□□□□ -0.9
LMO3-208ENST00000441439 NFAT5O94916 1531 aa9.41□□□□□ -0.9
LMO3-208ENST00000441439 CCDC192P0DO97 292 aa9.41□□□□□ -0.9
LMO3-208ENST00000441439 TDRD7Q8NHU6 1098 aaKnown RBP9.41□□□□□ -0.9
LMO3-208ENST00000441439 DNAJC2Q99543 621 aaKnown RBP9.41□□□□□ -0.9
LMO3-208ENST00000441439 CALCOCO1Q9P1Z2 691 aa9.41□□□□□ -0.9
LMO3-208ENST00000441439 COL18A1P39060 1754 aa9.41□□□□□ -0.9
LMO3-208ENST00000441439 SMARCA5O60264 1052 aaPredicted RBP9.4□□□□□ -0.9
LMO3-208ENST00000441439 RAPGEF3O95398 923 aa9.4□□□□□ -0.9
LMO3-208ENST00000441439 AEBP1Q8IUX7 1158 aa9.4□□□□□ -0.9
LMO3-208ENST00000441439 C17orf53Q8N3J3 647 aaPredicted RBP9.4□□□□□ -0.9
LMO3-208ENST00000441439 PALD1Q9ULE6 856 aa9.4□□□□□ -0.9
LMO3-208ENST00000441439 TTC21BQ7Z4L5 1316 aa9.4□□□□□ -0.9
LMO3-208ENST00000441439 SARM1Q6SZW1 724 aa9.4□□□□□ -0.9
LMO3-208ENST00000441439 GGNBP2Q9H3C7 697 aa9.4□□□□□ -0.9
LMO3-208ENST00000441439 SPDYE4A6NLX3 237 aa9.4□□□□□ -0.91
LMO3-208ENST00000441439 NYAP1Q6ZVC0 841 aa9.4□□□□□ -0.91
LMO3-208ENST00000441439 TIGD1Q96MW7 591 aa9.4□□□□□ -0.91
LMO3-208ENST00000441439 CABP2Q9NPB3 220 aa9.4□□□□□ -0.91
LMO3-208ENST00000441439 TTC21AQ8NDW8 1320 aa9.39□□□□□ -0.91
LMO3-208ENST00000441439 RAD50Q92878 1312 aa9.39□□□□□ -0.91
LMO3-208ENST00000441439 STX6O43752 255 aa9.39□□□□□ -0.91
LMO3-208ENST00000441439 IRX5P78411 483 aaPredicted RBP9.39□□□□□ -0.91
LMO3-208ENST00000441439 PHACTR3Q96KR7 559 aa9.39□□□□□ -0.91
LMO3-208ENST00000441439 TNRQ92752 1358 aa9.39□□□□□ -0.91
LMO3-208ENST00000441439 CHL1O00533 1208 aa9.39□□□□□ -0.91
LMO3-208ENST00000441439 TUBB4AP04350 444 aa9.39□□□□□ -0.91
LMO3-208ENST00000441439 ZNF771Q7L3S4 317 aaPredicted RBP9.39□□□□□ -0.91
LMO3-208ENST00000441439 HDGFL2Q7Z4V5 671 aaPredicted RBP9.39□□□□□ -0.91
LMO3-208ENST00000441439 CRB1P82279 1406 aa9.39□□□□□ -0.91
LMO3-208ENST00000441439 SOS1Q07889 1333 aaPredicted RBP9.39□□□□□ -0.91
LMO3-208ENST00000441439 CNPY2Q9Y2B0 182 aa9.39□□□□□ -0.91
LMO3-208ENST00000441439 KCNJ6P48051 423 aa9.38□□□□□ -0.91
LMO3-208ENST00000441439 CCT4P50991 539 aaKnown RBP9.38□□□□□ -0.91
LMO3-208ENST00000441439 ERO1AQ96HE7 468 aa9.38□□□□□ -0.91
LMO3-208ENST00000441439 NAP1L2Q9ULW6 460 aaPredicted RBP9.38□□□□□ -0.91
LMO3-208ENST00000441439 USP42Q9H9J4 1324 aaKnown RBP9.38□□□□□ -0.91
LMO3-208ENST00000441439 STRCP1A6NGW2 1772 aa9.38□□□□□ -0.91
LMO3-208ENST00000441439 KIF2AO00139 706 aaPredicted RBP9.38□□□□□ -0.91
LMO3-208ENST00000441439 ZSCAN25Q6NSZ9 544 aa9.38□□□□□ -0.91
LMO3-208ENST00000441439 TM6SF1Q9BZW5 370 aa9.38□□□□□ -0.91
LMO3-208ENST00000441439 MRVI1Q9Y6F6 885 aa9.38□□□□□ -0.91
LMO3-208ENST00000441439 PKD1L3Q7Z443 1732 aa9.38□□□□□ -0.91
LMO3-208ENST00000441439 SYT1P21579 422 aa9.38□□□□□ -0.91
LMO3-208ENST00000441439 ZNF75DP51815 510 aa9.38□□□□□ -0.91
LMO3-208ENST00000441439 TMEM132EQ6IEE7 984 aa9.38□□□□□ -0.91
LMO3-208ENST00000441439 PAPPAQ13219 1627 aa9.37□□□□□ -0.91
LMO3-208ENST00000441439 ABCA3Q99758 1704 aa9.37□□□□□ -0.91
LMO3-208ENST00000441439 CYP2C19P33261 490 aa9.37□□□□□ -0.91
LMO3-208ENST00000441439 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.37□□□□□ -0.91
LMO3-208ENST00000441439 CCDC112Q8NEF3 446 aa9.37□□□□□ -0.91
LMO3-208ENST00000441439 ZSCAN31Q96LW9 406 aaPredicted RBP9.37□□□□□ -0.91
LMO3-208ENST00000441439 ALDH8A1Q9H2A2 487 aaPredicted RBP9.37□□□□□ -0.91
LMO3-208ENST00000441439 SH2B1Q9NRF2 756 aaPredicted RBP9.37□□□□□ -0.91
LMO3-208ENST00000441439 LIMCH1Q9UPQ0 1083 aa9.37□□□□□ -0.91
LMO3-208ENST00000441439 ERBB3P21860 1342 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms