RNA–Protein interactions for RNA: ENST00000440318.5

FAM3A-213, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-213ENST00000440318 USPL1Q5W0Q7 1092 aa18.28■□□□□ 0.52
FAM3A-213ENST00000440318 NRXN2Q9P2S2 1712 aa18.27■□□□□ 0.52
FAM3A-213ENST00000440318 TNNT2P45379 298 aaPredicted RBP18.27■□□□□ 0.52
FAM3A-213ENST00000440318 EIF4G2P78344 907 aaKnown RBP eCLIP18.27■□□□□ 0.52
FAM3A-213ENST00000440318 CCDC88AQ3V6T2 1871 aa18.26■□□□□ 0.51
FAM3A-213ENST00000440318 PLEKHO1Q53GL0 409 aaPredicted RBP18.26■□□□□ 0.51
FAM3A-213ENST00000440318 NFATC2IPQ8NCF5 419 aa18.26■□□□□ 0.51
FAM3A-213ENST00000440318 NFKBIEO00221 500 aa18.25■□□□□ 0.51
FAM3A-213ENST00000440318 MTHFSP49914 203 aa18.25■□□□□ 0.51
FAM3A-213ENST00000440318 NFIXQ14938 502 aa18.25■□□□□ 0.51
FAM3A-213ENST00000440318 SOS1Q07889 1333 aaPredicted RBP18.23■□□□□ 0.51
FAM3A-213ENST00000440318 CARMIL3Q8ND23 1372 aa18.23■□□□□ 0.51
FAM3A-213ENST00000440318 ZPR1O75312 459 aa18.23■□□□□ 0.51
FAM3A-213ENST00000440318 AEBP1Q8IUX7 1158 aa18.23■□□□□ 0.51
FAM3A-213ENST00000440318 DNAJC10Q8IXB1 793 aa18.23■□□□□ 0.51
FAM3A-213ENST00000440318 MKRN1Q9UHC7 482 aaKnown RBP18.23■□□□□ 0.51
FAM3A-213ENST00000440318 AMOTQ4VCS5 1084 aa18.22■□□□□ 0.51
FAM3A-213ENST00000440318 TTLL6Q8N841 843 aa18.22■□□□□ 0.51
FAM3A-213ENST00000440318 FOXN1O15353 648 aa18.21■□□□□ 0.51
FAM3A-213ENST00000440318 C1orf141Q5JVX7 400 aa18.21■□□□□ 0.51
FAM3A-213ENST00000440318 C2CD5Q86YS7 1000 aa18.21■□□□□ 0.51
FAM3A-213ENST00000440318 BCL2L12Q9HB09 334 aa18.21■□□□□ 0.51
FAM3A-213ENST00000440318 SCN11AQ9UI33 1791 aa18.2■□□□□ 0.5
FAM3A-213ENST00000440318 CREBZFQ9NS37 354 aa18.2■□□□□ 0.5
FAM3A-213ENST00000440318 NARFQ9UHQ1 456 aa18.2■□□□□ 0.5
FAM3A-213ENST00000440318 COL15A1P39059 1388 aa18.19■□□□□ 0.5
FAM3A-213ENST00000440318 SERPINB2P05120 415 aa18.19■□□□□ 0.5
FAM3A-213ENST00000440318 POTEIP0CG38 1075 aa18.19■□□□□ 0.5
FAM3A-213ENST00000440318 POTEJP0CG39 1038 aa18.19■□□□□ 0.5
FAM3A-213ENST00000440318 SLC34A2O95436 690 aa18.18■□□□□ 0.5
FAM3A-213ENST00000440318 CYP19A1P11511 503 aaPredicted RBP18.18■□□□□ 0.5
FAM3A-213ENST00000440318 CHADLQ6NUI6 762 aa18.18■□□□□ 0.5
FAM3A-213ENST00000440318 ZBTB1Q9Y2K1 713 aa18.17■□□□□ 0.5
FAM3A-213ENST00000440318 DICER1Q9UPY3 1922 aaKnown RBP18.17■□□□□ 0.5
FAM3A-213ENST00000440318 ANKRD31Q8N7Z5 1873 aa18.16■□□□□ 0.5
FAM3A-213ENST00000440318 COL11A2P13942 1736 aaPredicted RBP18.16■□□□□ 0.5
FAM3A-213ENST00000440318 H0YIN7 160 aa18.16■□□□□ 0.5
FAM3A-213ENST00000440318 DPY19L2Q6NUT2 758 aa18.16■□□□□ 0.5
FAM3A-213ENST00000440318 CNTNAP1P78357 1384 aa18.16■□□□□ 0.5
FAM3A-213ENST00000440318 FER1L6Q2WGJ9 1857 aa18.16■□□□□ 0.5
FAM3A-213ENST00000440318 ERFEQ4G0M1 354 aa18.15■□□□□ 0.5
FAM3A-213ENST00000440318 POLR3GLQ9BT43 218 aa18.15■□□□□ 0.5
FAM3A-213ENST00000440318 PRDM10Q9NQV6 1147 aa18.15■□□□□ 0.5
FAM3A-213ENST00000440318 ZNF219Q9P2Y4 722 aaPredicted RBP18.15■□□□□ 0.5
FAM3A-213ENST00000440318 MRC1P22897 1456 aa18.14■□□□□ 0.5
FAM3A-213ENST00000440318 C21orf2O43822 256 aa18.14■□□□□ 0.49
FAM3A-213ENST00000440318 SLC39A6Q13433 755 aa18.14■□□□□ 0.49
FAM3A-213ENST00000440318 SULT6B1Q6IMI4 303 aa18.14■□□□□ 0.49
FAM3A-213ENST00000440318 SLC52A2Q9HAB3 445 aa18.14■□□□□ 0.49
FAM3A-213ENST00000440318 DDNO94850 711 aaPredicted RBP18.13■□□□□ 0.49
FAM3A-213ENST00000440318 BICDL1Q6ZP65 573 aa18.13■□□□□ 0.49
FAM3A-213ENST00000440318 LGR6Q9HBX8 967 aa18.13■□□□□ 0.49
FAM3A-213ENST00000440318 ZNF622Q969S3 477 aaKnown RBP eCLIP18.12■□□□□ 0.49
FAM3A-213ENST00000440318 PASKQ96RG2 1323 aa18.12■□□□□ 0.49
FAM3A-213ENST00000440318 CCDC24Q8N4L8 307 aa18.11■□□□□ 0.49
FAM3A-213ENST00000440318 CANXP27824 592 aaKnown RBP18.1■□□□□ 0.49
FAM3A-213ENST00000440318 CTCFP49711 727 aaPredicted RBP18.1■□□□□ 0.49
FAM3A-213ENST00000440318 VEGFBP49765 207 aa18.1■□□□□ 0.49
FAM3A-213ENST00000440318 AKAP4Q5JQC9 854 aa18.1■□□□□ 0.49
FAM3A-213ENST00000440318 VIRMAQ69YN4 1812 aaKnown RBP18.09■□□□□ 0.49
FAM3A-213ENST00000440318 LTBP3Q9NS15 1303 aa18.09■□□□□ 0.49
FAM3A-213ENST00000440318 TBC1D9BQ66K14 1250 aa18.09■□□□□ 0.49
FAM3A-213ENST00000440318 TAOK3Q9H2K8 898 aa18.09■□□□□ 0.49
FAM3A-213ENST00000440318 LBX1P52954 281 aa18.08■□□□□ 0.48
FAM3A-213ENST00000440318 PRR5LQ6MZQ0 368 aa18.08■□□□□ 0.48
FAM3A-213ENST00000440318 AIDAQ96BJ3 306 aa18.08■□□□□ 0.48
FAM3A-213ENST00000440318 BRIP1Q9BX63 1249 aa18.08■□□□□ 0.48
FAM3A-213ENST00000440318 UBR2Q8IWV8 1755 aa18.08■□□□□ 0.48
FAM3A-213ENST00000440318 SCN7AQ01118 1682 aa18.08■□□□□ 0.48
FAM3A-213ENST00000440318 SLX4Q8IY92 1834 aa18.07■□□□□ 0.48
FAM3A-213ENST00000440318 KIF7Q2M1P5 1343 aa18.07■□□□□ 0.48
FAM3A-213ENST00000440318 RNMTO43148 476 aaKnown RBP18.07■□□□□ 0.48
FAM3A-213ENST00000440318 IL13P35225 146 aa18.07■□□□□ 0.48
FAM3A-213ENST00000440318 EIF5P55010 431 aaKnown RBP18.07■□□□□ 0.48
FAM3A-213ENST00000440318 LDHDQ86WU2 507 aa18.07■□□□□ 0.48
FAM3A-213ENST00000440318 WBP1LQ9NX94 342 aa18.07■□□□□ 0.48
FAM3A-213ENST00000440318 CACNA1SQ13698 1873 aa18.07■□□□□ 0.48
FAM3A-213ENST00000440318 PDE6BP35913 854 aa18.06■□□□□ 0.48
FAM3A-213ENST00000440318 FAM161AQ3B820 660 aa18.06■□□□□ 0.48
FAM3A-213ENST00000440318 VSIG10Q8N0Z9 540 aa18.06■□□□□ 0.48
FAM3A-213ENST00000440318 TAF1DQ9H5J8 278 aaPredicted RBP18.06■□□□□ 0.48
FAM3A-213ENST00000440318 TMEM88BA6NKF7 163 aa18.05■□□□□ 0.48
FAM3A-213ENST00000440318 ITGBL1O95965 494 aaPredicted RBP18.05■□□□□ 0.48
FAM3A-213ENST00000440318 ABHD8Q96I13 439 aa18.05■□□□□ 0.48
FAM3A-213ENST00000440318 L3MBTL3Q96JM7 780 aaPredicted RBP18.05■□□□□ 0.48
FAM3A-213ENST00000440318 SCN4AP35499 1836 aa18.05■□□□□ 0.48
FAM3A-213ENST00000440318 PRPF40BQ6NWY9 871 aaKnown RBP18.04■□□□□ 0.48
FAM3A-213ENST00000440318 PANK3Q9H999 370 aa18.04■□□□□ 0.48
FAM3A-213ENST00000440318 PDZRN3Q9UPQ7 1066 aa18.04■□□□□ 0.48
FAM3A-213ENST00000440318 ARFGEF2Q9Y6D5 1785 aa18.04■□□□□ 0.48
FAM3A-213ENST00000440318 IQCA1LA6NCM1 817 aa18.03■□□□□ 0.48
FAM3A-213ENST00000440318 HSPA8P11142 646 aaKnown RBP18.03■□□□□ 0.48
FAM3A-213ENST00000440318 MORC1Q86VD1 984 aa18.03■□□□□ 0.48
FAM3A-213ENST00000440318 ADAMTSL1Q8N6G6 1762 aa18.03■□□□□ 0.48
FAM3A-213ENST00000440318 TBC1D2BQ9UPU7 963 aa18.02■□□□□ 0.48
FAM3A-213ENST00000440318 ZNF541Q9H0D2 1346 aa18.01■□□□□ 0.47
FAM3A-213ENST00000440318 A0A087WZG4 1122 aa18.01■□□□□ 0.47
FAM3A-213ENST00000440318 SRGNP10124 158 aa18.01■□□□□ 0.47
FAM3A-213ENST00000440318 EAPPQ56P03 285 aaPredicted RBP18.01■□□□□ 0.47
FAM3A-213ENST00000440318 STYK1Q6J9G0 422 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms