RNA–Protein interactions for RNA: ENST00000440179.5

SMC2-204, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 3

Gene SMC2, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-204ENST00000440179 RASSF7Q02833 373 aa18.9■□□□□ 0.62
SMC2-204ENST00000440179 ZC3H4Q9UPT8 1303 aaKnown RBP18.9■□□□□ 0.62
SMC2-204ENST00000440179 POLRMTO00411 1230 aaKnown RBP18.89■□□□□ 0.61
SMC2-204ENST00000440179 TM4SF1P30408 202 aa18.88■□□□□ 0.61
SMC2-204ENST00000440179 TJP1Q07157 1748 aa18.88■□□□□ 0.61
SMC2-204ENST00000440179 PTCD1O75127 700 aaKnown RBP18.87■□□□□ 0.61
SMC2-204ENST00000440179 HSP90AB1P08238 724 aaKnown RBP18.87■□□□□ 0.61
SMC2-204ENST00000440179 CABP4P57796 275 aa18.87■□□□□ 0.61
SMC2-204ENST00000440179 CDCA8Q53HL2 280 aa18.87■□□□□ 0.61
SMC2-204ENST00000440179 GLTPD2A6NH11 291 aa18.86■□□□□ 0.61
SMC2-204ENST00000440179 VEGFAP15692 232 aaPredicted RBP18.86■□□□□ 0.61
SMC2-204ENST00000440179 LMNB1P20700 586 aa18.85■□□□□ 0.61
SMC2-204ENST00000440179 ZNF530Q6P9A1 599 aaPredicted RBP18.85■□□□□ 0.61
SMC2-204ENST00000440179 INTS5Q6P9B9 1019 aaKnown RBP18.85■□□□□ 0.61
SMC2-204ENST00000440179 TIAM2Q8IVF5 1701 aa18.83■□□□□ 0.61
SMC2-204ENST00000440179 AFDNP55196 1824 aaKnown RBP18.82■□□□□ 0.6
SMC2-204ENST00000440179 POTECB2RU33 542 aa18.82■□□□□ 0.6
SMC2-204ENST00000440179 PLEKHO1Q53GL0 409 aaPredicted RBP18.82■□□□□ 0.6
SMC2-204ENST00000440179 DLEC1Q9Y238 1755 aa18.82■□□□□ 0.6
SMC2-204ENST00000440179 NRXN2Q9P2S2 1712 aa18.82■□□□□ 0.6
SMC2-204ENST00000440179 NFKBIEO00221 500 aa18.81■□□□□ 0.6
SMC2-204ENST00000440179 TNNT2P45379 298 aaPredicted RBP18.81■□□□□ 0.6
SMC2-204ENST00000440179 MTHFSP49914 203 aa18.81■□□□□ 0.6
SMC2-204ENST00000440179 USPL1Q5W0Q7 1092 aa18.81■□□□□ 0.6
SMC2-204ENST00000440179 NFATC2IPQ8NCF5 419 aa18.81■□□□□ 0.6
SMC2-204ENST00000440179 SOS1Q07889 1333 aaPredicted RBP18.8■□□□□ 0.6
SMC2-204ENST00000440179 NFIXQ14938 502 aa18.8■□□□□ 0.6
SMC2-204ENST00000440179 AMOTQ4VCS5 1084 aa18.8■□□□□ 0.6
SMC2-204ENST00000440179 AEBP1Q8IUX7 1158 aa18.79■□□□□ 0.6
SMC2-204ENST00000440179 CCDC88AQ3V6T2 1871 aa18.79■□□□□ 0.6
SMC2-204ENST00000440179 ZPR1O75312 459 aa18.78■□□□□ 0.6
SMC2-204ENST00000440179 DNAJC10Q8IXB1 793 aa18.78■□□□□ 0.6
SMC2-204ENST00000440179 TTLL6Q8N841 843 aa18.78■□□□□ 0.6
SMC2-204ENST00000440179 CARMIL3Q8ND23 1372 aa18.78■□□□□ 0.6
SMC2-204ENST00000440179 BCL2L12Q9HB09 334 aa18.76■□□□□ 0.59
SMC2-204ENST00000440179 CYP19A1P11511 503 aaPredicted RBP18.75■□□□□ 0.59
SMC2-204ENST00000440179 C1orf141Q5JVX7 400 aa18.75■□□□□ 0.59
SMC2-204ENST00000440179 NARFQ9UHQ1 456 aa18.75■□□□□ 0.59
SMC2-204ENST00000440179 SCN11AQ9UI33 1791 aa18.75■□□□□ 0.59
SMC2-204ENST00000440179 COL15A1P39059 1388 aa18.74■□□□□ 0.59
SMC2-204ENST00000440179 SERPINB2P05120 415 aa18.74■□□□□ 0.59
SMC2-204ENST00000440179 C2CD5Q86YS7 1000 aa18.74■□□□□ 0.59
SMC2-204ENST00000440179 CREBZFQ9NS37 354 aa18.74■□□□□ 0.59
SMC2-204ENST00000440179 MKRN1Q9UHC7 482 aaKnown RBP18.74■□□□□ 0.59
SMC2-204ENST00000440179 FOXN1O15353 648 aa18.73■□□□□ 0.59
SMC2-204ENST00000440179 POTEIP0CG38 1075 aa18.72■□□□□ 0.59
SMC2-204ENST00000440179 POTEJP0CG39 1038 aa18.72■□□□□ 0.59
SMC2-204ENST00000440179 ZBTB1Q9Y2K1 713 aa18.72■□□□□ 0.59
SMC2-204ENST00000440179 DICER1Q9UPY3 1922 aaKnown RBP18.71■□□□□ 0.59
SMC2-204ENST00000440179 CHADLQ6NUI6 762 aa18.71■□□□□ 0.59
SMC2-204ENST00000440179 DPY19L2Q6NUT2 758 aa18.71■□□□□ 0.59
SMC2-204ENST00000440179 MRC1P22897 1456 aa18.71■□□□□ 0.59
SMC2-204ENST00000440179 H0YIN7 160 aa18.7■□□□□ 0.58
SMC2-204ENST00000440179 SLC34A2O95436 690 aa18.7■□□□□ 0.58
SMC2-204ENST00000440179 SLC52A2Q9HAB3 445 aa18.7■□□□□ 0.58
SMC2-204ENST00000440179 CNTNAP1P78357 1384 aa18.69■□□□□ 0.58
SMC2-204ENST00000440179 FER1L6Q2WGJ9 1857 aa18.69■□□□□ 0.58
SMC2-204ENST00000440179 ANKRD31Q8N7Z5 1873 aa18.69■□□□□ 0.58
SMC2-204ENST00000440179 SLC39A6Q13433 755 aa18.69■□□□□ 0.58
SMC2-204ENST00000440179 ERFEQ4G0M1 354 aa18.69■□□□□ 0.58
SMC2-204ENST00000440179 SULT6B1Q6IMI4 303 aa18.69■□□□□ 0.58
SMC2-204ENST00000440179 PRDM10Q9NQV6 1147 aa18.69■□□□□ 0.58
SMC2-204ENST00000440179 COL11A2P13942 1736 aaPredicted RBP18.69■□□□□ 0.58
SMC2-204ENST00000440179 LGR6Q9HBX8 967 aa18.68■□□□□ 0.58
SMC2-204ENST00000440179 C21orf2O43822 256 aa18.67■□□□□ 0.58
SMC2-204ENST00000440179 PASKQ96RG2 1323 aa18.67■□□□□ 0.58
SMC2-204ENST00000440179 DDNO94850 711 aaPredicted RBP18.66■□□□□ 0.58
SMC2-204ENST00000440179 AKAP4Q5JQC9 854 aa18.66■□□□□ 0.58
SMC2-204ENST00000440179 BICDL1Q6ZP65 573 aa18.65■□□□□ 0.58
SMC2-204ENST00000440179 ZNF622Q969S3 477 aaKnown RBP eCLIP18.65■□□□□ 0.58
SMC2-204ENST00000440179 LTBP3Q9NS15 1303 aa18.65■□□□□ 0.58
SMC2-204ENST00000440179 IL13P35225 146 aa18.64■□□□□ 0.57
SMC2-204ENST00000440179 RNMTO43148 476 aaKnown RBP18.63■□□□□ 0.57
SMC2-204ENST00000440179 CTCFP49711 727 aaPredicted RBP18.63■□□□□ 0.57
SMC2-204ENST00000440179 VEGFBP49765 207 aa18.63■□□□□ 0.57
SMC2-204ENST00000440179 EIF5P55010 431 aaKnown RBP18.63■□□□□ 0.57
SMC2-204ENST00000440179 TBC1D9BQ66K14 1250 aa18.63■□□□□ 0.57
SMC2-204ENST00000440179 CCDC24Q8N4L8 307 aa18.63■□□□□ 0.57
SMC2-204ENST00000440179 POLR3GLQ9BT43 218 aa18.63■□□□□ 0.57
SMC2-204ENST00000440179 BRIP1Q9BX63 1249 aa18.63■□□□□ 0.57
SMC2-204ENST00000440179 TAOK3Q9H2K8 898 aa18.63■□□□□ 0.57
SMC2-204ENST00000440179 CANXP27824 592 aaKnown RBP18.62■□□□□ 0.57
SMC2-204ENST00000440179 PRR5LQ6MZQ0 368 aa18.62■□□□□ 0.57
SMC2-204ENST00000440179 VSIG10Q8N0Z9 540 aa18.62■□□□□ 0.57
SMC2-204ENST00000440179 UBR2Q8IWV8 1755 aa18.62■□□□□ 0.57
SMC2-204ENST00000440179 VIRMAQ69YN4 1812 aaKnown RBP18.61■□□□□ 0.57
SMC2-204ENST00000440179 SLX4Q8IY92 1834 aa18.61■□□□□ 0.57
SMC2-204ENST00000440179 SCN7AQ01118 1682 aa18.61■□□□□ 0.57
SMC2-204ENST00000440179 PDE6BP35913 854 aa18.61■□□□□ 0.57
SMC2-204ENST00000440179 LDHDQ86WU2 507 aa18.61■□□□□ 0.57
SMC2-204ENST00000440179 PANK3Q9H999 370 aa18.61■□□□□ 0.57
SMC2-204ENST00000440179 WBP1LQ9NX94 342 aa18.61■□□□□ 0.57
SMC2-204ENST00000440179 PDZRN3Q9UPQ7 1066 aa18.61■□□□□ 0.57
SMC2-204ENST00000440179 ZBTB12Q9Y330 459 aaPredicted RBP18.61■□□□□ 0.57
SMC2-204ENST00000440179 AIDAQ96BJ3 306 aa18.6■□□□□ 0.57
SMC2-204ENST00000440179 L3MBTL3Q96JM7 780 aaPredicted RBP18.6■□□□□ 0.57
SMC2-204ENST00000440179 TAF1DQ9H5J8 278 aaPredicted RBP18.6■□□□□ 0.57
SMC2-204ENST00000440179 ITGBL1O95965 494 aaPredicted RBP18.59■□□□□ 0.57
SMC2-204ENST00000440179 LBX1P52954 281 aa18.59■□□□□ 0.57
SMC2-204ENST00000440179 TMEM88BA6NKF7 163 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms