RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 PIK3R2O00459 728 aa6.26□□□□□ -1.41
HMGB3P11-201ENST00000440127 BCRP11274 1271 aa6.26□□□□□ -1.41
HMGB3P11-201ENST00000440127 KANK3Q6NY19 840 aa6.26□□□□□ -1.41
HMGB3P11-201ENST00000440127 NEDD1Q8NHV4 660 aa6.26□□□□□ -1.41
HMGB3P11-201ENST00000440127 CALR3Q96L12 384 aaKnown RBP6.26□□□□□ -1.41
HMGB3P11-201ENST00000440127 NEUROD4Q9HD90 331 aa6.26□□□□□ -1.41
HMGB3P11-201ENST00000440127 DNAAF2Q9NVR5 837 aaKnown RBP6.26□□□□□ -1.41
HMGB3P11-201ENST00000440127 GTF3C3Q9Y5Q9 886 aa6.26□□□□□ -1.41
HMGB3P11-201ENST00000440127 BMP4P12644 408 aa6.25□□□□□ -1.41
HMGB3P11-201ENST00000440127 BICDL1Q6ZP65 573 aa6.25□□□□□ -1.41
HMGB3P11-201ENST00000440127 DEPDC4Q8N2C3 294 aa6.25□□□□□ -1.41
HMGB3P11-201ENST00000440127 GOLGA6L1Q8N7Z2 621 aa6.25□□□□□ -1.41
HMGB3P11-201ENST00000440127 TPCN2Q8NHX9 752 aa6.25□□□□□ -1.41
HMGB3P11-201ENST00000440127 OXCT2Q9BYC2 517 aaPredicted RBP6.25□□□□□ -1.41
HMGB3P11-201ENST00000440127 ZNF358Q9NW07 568 aa6.25□□□□□ -1.41
HMGB3P11-201ENST00000440127 SCHIP1Q9P0W5 487 aaPredicted RBP6.25□□□□□ -1.41
HMGB3P11-201ENST00000440127 PCDHGC4Q9Y5F7 938 aa6.25□□□□□ -1.41
HMGB3P11-201ENST00000440127 CELA2BP08218 269 aaPredicted RBP6.24□□□□□ -1.41
HMGB3P11-201ENST00000440127 FGFR3P22607 806 aa6.24□□□□□ -1.41
HMGB3P11-201ENST00000440127 HIF1AQ16665 826 aa6.24□□□□□ -1.41
HMGB3P11-201ENST00000440127 CCDC102BQ68D86 513 aa6.24□□□□□ -1.41
HMGB3P11-201ENST00000440127 LARP1Q6PKG0 1096 aaKnown RBP6.24□□□□□ -1.41
HMGB3P11-201ENST00000440127 CLUAP1Q96AJ1 413 aa6.24□□□□□ -1.41
HMGB3P11-201ENST00000440127 MKRN1Q9UHC7 482 aaKnown RBP6.24□□□□□ -1.41
HMGB3P11-201ENST00000440127 ZNF232Q9UNY5 417 aa6.24□□□□□ -1.41
HMGB3P11-201ENST00000440127 ATXN7O15265 892 aaPredicted RBP6.23□□□□□ -1.41
HMGB3P11-201ENST00000440127 ARHGEF15O94989 841 aa6.23□□□□□ -1.41
HMGB3P11-201ENST00000440127 STAU1O95793 577 aaKnown RBP6.23□□□□□ -1.41
HMGB3P11-201ENST00000440127 ATP4AP20648 1035 aa6.23□□□□□ -1.41
HMGB3P11-201ENST00000440127 PSMA6P60900 246 aaKnown RBP6.23□□□□□ -1.41
HMGB3P11-201ENST00000440127 TEAD4Q15561 434 aa6.23□□□□□ -1.41
HMGB3P11-201ENST00000440127 SIX5Q8N196 739 aa6.23□□□□□ -1.41
HMGB3P11-201ENST00000440127 FNBP4Q8N3X1 1017 aaPredicted RBP6.23□□□□□ -1.41
HMGB3P11-201ENST00000440127 OGFOD1Q8N543 542 aa6.23□□□□□ -1.41
HMGB3P11-201ENST00000440127 IQSEC3Q9UPP2 1182 aaPredicted RBP6.23□□□□□ -1.41
HMGB3P11-201ENST00000440127 A0A1W2PNR3 127 aa6.22□□□□□ -1.41
HMGB3P11-201ENST00000440127 SERTM1A2A2V5 107 aa6.22□□□□□ -1.41
HMGB3P11-201ENST00000440127 IRS1P35568 1242 aa6.22□□□□□ -1.41
HMGB3P11-201ENST00000440127 LAMC2Q13753 1193 aa6.22□□□□□ -1.41
HMGB3P11-201ENST00000440127 SAMD5Q5TGI4 173 aa6.22□□□□□ -1.41
HMGB3P11-201ENST00000440127 GPAT2Q6NUI2 795 aa6.22□□□□□ -1.41
HMGB3P11-201ENST00000440127 LYPD4Q6UWN0 246 aa6.22□□□□□ -1.41
HMGB3P11-201ENST00000440127 SLC9A9Q8IVB4 645 aa6.22□□□□□ -1.41
HMGB3P11-201ENST00000440127 BEND7Q8N7W2 519 aaPredicted RBP6.22□□□□□ -1.41
HMGB3P11-201ENST00000440127 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.22□□□□□ -1.41
HMGB3P11-201ENST00000440127 ADAMTS19Q8TE59 1207 aa6.22□□□□□ -1.41
HMGB3P11-201ENST00000440127 UCN2Q96RP3 112 aa6.22□□□□□ -1.41
HMGB3P11-201ENST00000440127 AVENQ9NQS1 362 aaPredicted RBP6.22□□□□□ -1.41
HMGB3P11-201ENST00000440127 OIP5O43482 229 aa6.21□□□□□ -1.42
HMGB3P11-201ENST00000440127 FAM157BP0CG42 384 aa6.21□□□□□ -1.42
HMGB3P11-201ENST00000440127 RASA1P20936 1047 aa6.21□□□□□ -1.42
HMGB3P11-201ENST00000440127 NEUROD1Q13562 356 aa6.21□□□□□ -1.42
HMGB3P11-201ENST00000440127 FAM182BQ5T319 152 aa6.21□□□□□ -1.42
HMGB3P11-201ENST00000440127 SLCO4C1Q6ZQN7 724 aa6.21□□□□□ -1.42
HMGB3P11-201ENST00000440127 GAS2L2Q8NHY3 880 aa6.21□□□□□ -1.42
HMGB3P11-201ENST00000440127 ABHD17AQ96GS6 310 aa6.21□□□□□ -1.42
HMGB3P11-201ENST00000440127 ANKIB1Q9P2G1 1089 aa6.21□□□□□ -1.42
HMGB3P11-201ENST00000440127 MAFBQ9Y5Q3 323 aaPredicted RBP6.21□□□□□ -1.42
HMGB3P11-201ENST00000440127 ARAFP10398 606 aa6.2□□□□□ -1.42
HMGB3P11-201ENST00000440127 NOS2P35228 1153 aa6.2□□□□□ -1.42
HMGB3P11-201ENST00000440127 SEC13P55735 322 aa6.2□□□□□ -1.42
HMGB3P11-201ENST00000440127 FOXK2Q01167 660 aa6.2□□□□□ -1.42
HMGB3P11-201ENST00000440127 C1orf53Q5VUE5 145 aa6.2□□□□□ -1.42
HMGB3P11-201ENST00000440127 ALYREFQ86V81 257 aaKnown RBP6.2□□□□□ -1.42
HMGB3P11-201ENST00000440127 RHPN1Q8TCX5 695 aa6.2□□□□□ -1.42
HMGB3P11-201ENST00000440127 WHAMMQ8TF30 809 aa6.2□□□□□ -1.42
HMGB3P11-201ENST00000440127 L3MBTL2Q969R5 705 aa6.2□□□□□ -1.42
HMGB3P11-201ENST00000440127 ACDQ96AP0 544 aa6.2□□□□□ -1.42
HMGB3P11-201ENST00000440127 ZNF594Q96JF6 807 aaPredicted RBP6.2□□□□□ -1.42
HMGB3P11-201ENST00000440127 ZCCHC2Q9C0B9 1178 aaKnown RBP6.2□□□□□ -1.42
HMGB3P11-201ENST00000440127 BNIP3LO60238 219 aa6.19□□□□□ -1.42
HMGB3P11-201ENST00000440127 AMPD1P23109 780 aa6.19□□□□□ -1.42
HMGB3P11-201ENST00000440127 ADH6P28332 368 aa6.19□□□□□ -1.42
HMGB3P11-201ENST00000440127 HIRAP54198 1017 aaPredicted RBP6.19□□□□□ -1.42
HMGB3P11-201ENST00000440127 EPHA4P54764 986 aa6.19□□□□□ -1.42
HMGB3P11-201ENST00000440127 CLDN10P78369 228 aa6.19□□□□□ -1.42
HMGB3P11-201ENST00000440127 KLRG1Q96E93 195 aa6.19□□□□□ -1.42
HMGB3P11-201ENST00000440127 PPP1R12CQ9BZL4 782 aa6.19□□□□□ -1.42
HMGB3P11-201ENST00000440127 NDFIP2Q9NV92 336 aa6.19□□□□□ -1.42
HMGB3P11-201ENST00000440127 TFIP11Q9UBB9 837 aaKnown RBP6.19□□□□□ -1.42
HMGB3P11-201ENST00000440127 DNMT3AQ9Y6K1 912 aaPredicted RBP6.19□□□□□ -1.42
HMGB3P11-201ENST00000440127 KHNYNO15037 678 aaKnown RBP6.18□□□□□ -1.42
HMGB3P11-201ENST00000440127 UBAP2LQ14157 1087 aaKnown RBP6.18□□□□□ -1.42
HMGB3P11-201ENST00000440127 TNS4Q8IZW8 715 aa6.18□□□□□ -1.42
HMGB3P11-201ENST00000440127 ZNF295-AS1Q8N0V1 137 aa6.18□□□□□ -1.42
HMGB3P11-201ENST00000440127 STAG2Q8N3U4 1231 aa6.18□□□□□ -1.42
HMGB3P11-201ENST00000440127 ZIC5Q96T25 663 aa6.18□□□□□ -1.42
HMGB3P11-201ENST00000440127 VRTNQ9H8Y1 702 aa6.18□□□□□ -1.42
HMGB3P11-201ENST00000440127 MKL2Q9ULH7 1088 aa6.18□□□□□ -1.42
HMGB3P11-201ENST00000440127 PRR12Q9ULL5 1215 aa6.18□□□□□ -1.42
HMGB3P11-201ENST00000440127 DCDC2BA2VCK2 349 aa6.17□□□□□ -1.42
HMGB3P11-201ENST00000440127 FAM196BA6NMK8 535 aa6.17□□□□□ -1.42
HMGB3P11-201ENST00000440127 PPP1R12BO60237 982 aaPredicted RBP6.17□□□□□ -1.42
HMGB3P11-201ENST00000440127 IGHA1P01876 353 aa6.17□□□□□ -1.42
HMGB3P11-201ENST00000440127 THBS1P07996 1170 aa6.17□□□□□ -1.42
HMGB3P11-201ENST00000440127 MAPTP10636 758 aaKnown RBP6.17□□□□□ -1.42
HMGB3P11-201ENST00000440127 MARK1Q9P0L2 795 aa6.17□□□□□ -1.42
HMGB3P11-201ENST00000440127 EML1O00423 815 aa6.16□□□□□ -1.42
HMGB3P11-201ENST00000440127 TNP2Q05952 138 aa6.16□□□□□ -1.42
HMGB3P11-201ENST00000440127 ERICH6Q7L0X2 663 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms