RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 SOS2Q07890 1332 aaPredicted RBP17.44■□□□□ 0.38
LIMD1-202ENST00000440097 PNMA6EA0A0J9YXQ4 647 aa17.44■□□□□ 0.38
LIMD1-202ENST00000440097 AEBP2Q6ZN18 517 aaPredicted RBP17.44■□□□□ 0.38
LIMD1-202ENST00000440097 KDM3BQ7LBC6 1761 aa17.44■□□□□ 0.38
LIMD1-202ENST00000440097 CAMTA1Q9Y6Y1 1673 aa17.44■□□□□ 0.38
LIMD1-202ENST00000440097 EVA1CP58658 441 aa17.44■□□□□ 0.38
LIMD1-202ENST00000440097 PROSER3Q2NL68 480 aa17.44■□□□□ 0.38
LIMD1-202ENST00000440097 GLIPR1L2Q4G1C9 344 aa17.44■□□□□ 0.38
LIMD1-202ENST00000440097 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.44■□□□□ 0.38
LIMD1-202ENST00000440097 OVOS2A0A0G2JMS6 1433 aa17.43■□□□□ 0.38
LIMD1-202ENST00000440097 CYP27B1O15528 508 aa17.43■□□□□ 0.38
LIMD1-202ENST00000440097 PKNOX2Q96KN3 472 aa17.43■□□□□ 0.38
LIMD1-202ENST00000440097 DCAF5Q96JK2 942 aa17.42■□□□□ 0.38
LIMD1-202ENST00000440097 MYL6BP14649 208 aa17.42■□□□□ 0.38
LIMD1-202ENST00000440097 MAP3K2Q9Y2U5 619 aa17.42■□□□□ 0.38
LIMD1-202ENST00000440097 KDM6AO15550 1401 aaPredicted RBP17.41■□□□□ 0.38
LIMD1-202ENST00000440097 GSPT1P15170 499 aaKnown RBP17.41■□□□□ 0.38
LIMD1-202ENST00000440097 CABP4P57796 275 aa17.41■□□□□ 0.38
LIMD1-202ENST00000440097 TBC1D9Q6ZT07 1266 aa17.41■□□□□ 0.38
LIMD1-202ENST00000440097 COL18A1P39060 1754 aa17.41■□□□□ 0.38
LIMD1-202ENST00000440097 TRAK2O60296 914 aa17.41■□□□□ 0.38
LIMD1-202ENST00000440097 WDR17Q8IZU2 1322 aa17.41■□□□□ 0.38
LIMD1-202ENST00000440097 HSP90AB1P08238 724 aaKnown RBP17.4■□□□□ 0.38
LIMD1-202ENST00000440097 NBPF7P0C2Y1 421 aaPredicted RBP17.4■□□□□ 0.38
LIMD1-202ENST00000440097 ATP8B2P98198 1209 aa17.4■□□□□ 0.38
LIMD1-202ENST00000440097 CDC45O75419 566 aa17.4■□□□□ 0.38
LIMD1-202ENST00000440097 BEND3Q5T5X7 828 aa17.4■□□□□ 0.38
LIMD1-202ENST00000440097 TTC22Q5TAA0 569 aa17.4■□□□□ 0.38
LIMD1-202ENST00000440097 LRRCC1Q9C099 1032 aa17.4■□□□□ 0.38
LIMD1-202ENST00000440097 HYPKQ9NX55 129 aa17.4■□□□□ 0.38
LIMD1-202ENST00000440097 C9orf78Q9NZ63 289 aaPredicted RBP17.4■□□□□ 0.38
LIMD1-202ENST00000440097 PXDNLA1KZ92 1463 aa17.4■□□□□ 0.38
LIMD1-202ENST00000440097 HSP90AA1P07900 732 aaKnown RBP17.4■□□□□ 0.38
LIMD1-202ENST00000440097 ZNF496Q96IT1 587 aaPredicted RBP17.4■□□□□ 0.38
LIMD1-202ENST00000440097 DDX54Q8TDD1 881 aaKnown RBP17.39■□□□□ 0.37
LIMD1-202ENST00000440097 CHMP5Q9NZZ3 219 aa17.39■□□□□ 0.37
LIMD1-202ENST00000440097 DDX58O95786 925 aaKnown RBP17.39■□□□□ 0.37
LIMD1-202ENST00000440097 SRGAP3O43295 1099 aa17.38■□□□□ 0.37
LIMD1-202ENST00000440097 HSP90AA2PQ14568 343 aaPredicted RBP17.38■□□□□ 0.37
LIMD1-202ENST00000440097 ZCRB1Q8TBF4 217 aaKnown RBP17.38■□□□□ 0.37
LIMD1-202ENST00000440097 ADCY9O60503 1353 aa17.38■□□□□ 0.37
LIMD1-202ENST00000440097 MRE11P49959 708 aa17.38■□□□□ 0.37
LIMD1-202ENST00000440097 KSR2Q6VAB6 950 aa17.38■□□□□ 0.37
LIMD1-202ENST00000440097 PPP1R42Q7Z4L9 355 aa17.38■□□□□ 0.37
LIMD1-202ENST00000440097 DDX21Q9NR30 783 aaKnown RBP eCLIP17.38■□□□□ 0.37
LIMD1-202ENST00000440097 PIP4K2AP48426 406 aaPredicted RBP17.37■□□□□ 0.37
LIMD1-202ENST00000440097 CWF19L2Q2TBE0 894 aaKnown RBP17.37■□□□□ 0.37
LIMD1-202ENST00000440097 RIC3Q7Z5B4 369 aa17.37■□□□□ 0.37
LIMD1-202ENST00000440097 SURF6O75683 361 aaKnown RBP17.37■□□□□ 0.37
LIMD1-202ENST00000440097 TSHZ3Q63HK5 1081 aa17.37■□□□□ 0.37
LIMD1-202ENST00000440097 VSIG10Q8N0Z9 540 aa17.37■□□□□ 0.37
LIMD1-202ENST00000440097 LARP1Q6PKG0 1096 aaKnown RBP17.36■□□□□ 0.37
LIMD1-202ENST00000440097 HEG1Q9ULI3 1381 aa17.36■□□□□ 0.37
LIMD1-202ENST00000440097 CASC1Q6TDU7 716 aa17.36■□□□□ 0.37
LIMD1-202ENST00000440097 IL1RAPL2Q9NP60 686 aa17.36■□□□□ 0.37
LIMD1-202ENST00000440097 IL2RBP14784 551 aa17.35■□□□□ 0.37
LIMD1-202ENST00000440097 SDSP20132 328 aa17.35■□□□□ 0.37
LIMD1-202ENST00000440097 FMNL2Q96PY5 1086 aa17.35■□□□□ 0.37
LIMD1-202ENST00000440097 CRYBG1Q9Y4K1 1723 aa17.35■□□□□ 0.37
LIMD1-202ENST00000440097 PCDH11XQ9BZA7 1347 aa17.35■□□□□ 0.37
LIMD1-202ENST00000440097 PCDH11YQ9BZA8 1340 aa17.35■□□□□ 0.37
LIMD1-202ENST00000440097 SNRPA1P09661 255 aaKnown RBP17.35■□□□□ 0.37
LIMD1-202ENST00000440097 RRP9O43818 475 aaKnown RBP17.34■□□□□ 0.37
LIMD1-202ENST00000440097 OS9Q13438 667 aaPredicted RBP17.34■□□□□ 0.37
LIMD1-202ENST00000440097 GRPEL1Q9HAV7 217 aa17.34■□□□□ 0.37
LIMD1-202ENST00000440097 USP16Q9Y5T5 823 aa17.34■□□□□ 0.37
LIMD1-202ENST00000440097 ABCC6O95255 1503 aa17.34■□□□□ 0.37
LIMD1-202ENST00000440097 COL5A2P05997 1499 aaPredicted RBP17.34■□□□□ 0.37
LIMD1-202ENST00000440097 PDE1AP54750 535 aa17.34■□□□□ 0.37
LIMD1-202ENST00000440097 SCN11AQ9UI33 1791 aa17.34■□□□□ 0.37
LIMD1-202ENST00000440097 NEXNQ0ZGT2 675 aa17.33■□□□□ 0.36
LIMD1-202ENST00000440097 COPS6Q7L5N1 327 aa17.33■□□□□ 0.36
LIMD1-202ENST00000440097 XAGE3Q8WTP9 111 aa17.33■□□□□ 0.36
LIMD1-202ENST00000440097 IBTKQ9P2D0 1353 aaPredicted RBP17.33■□□□□ 0.36
LIMD1-202ENST00000440097 PDIA6Q15084 440 aa17.33■□□□□ 0.36
LIMD1-202ENST00000440097 SSH3Q8TE77 659 aa17.33■□□□□ 0.36
LIMD1-202ENST00000440097 CARD10Q9BWT7 1032 aa17.33■□□□□ 0.36
LIMD1-202ENST00000440097 SIPA1L3O60292 1781 aaPredicted RBP17.32■□□□□ 0.36
LIMD1-202ENST00000440097 MX1P20591 662 aa17.32■□□□□ 0.36
LIMD1-202ENST00000440097 ZMYND15Q9H091 742 aa17.32■□□□□ 0.36
LIMD1-202ENST00000440097 ERBB4Q15303 1308 aa17.32■□□□□ 0.36
LIMD1-202ENST00000440097 ESPNB1AK53 854 aa17.32■□□□□ 0.36
LIMD1-202ENST00000440097 TRIM6-TRIM34B2RNG4 842 aa17.32■□□□□ 0.36
LIMD1-202ENST00000440097 HSCBQ8IWL3 235 aa17.32■□□□□ 0.36
LIMD1-202ENST00000440097 BTG4Q9NY30 223 aa17.32■□□□□ 0.36
LIMD1-202ENST00000440097 NUTM2BA6NNL0 878 aaPredicted RBP17.31■□□□□ 0.36
LIMD1-202ENST00000440097 NUTM2EB1AL46 878 aaPredicted RBP17.31■□□□□ 0.36
LIMD1-202ENST00000440097 ALDH1L1O75891 902 aa17.31■□□□□ 0.36
LIMD1-202ENST00000440097 NUTM2AQ8IVF1 878 aaPredicted RBP17.31■□□□□ 0.36
LIMD1-202ENST00000440097 LINS1Q8NG48 757 aa17.31■□□□□ 0.36
LIMD1-202ENST00000440097 PTCD1O75127 700 aaKnown RBP17.31■□□□□ 0.36
LIMD1-202ENST00000440097 RBM25P49756 843 aaKnown RBP17.31■□□□□ 0.36
LIMD1-202ENST00000440097 DDX11L8A8MPP1 907 aa17.3■□□□□ 0.36
LIMD1-202ENST00000440097 RILPL2Q969X0 211 aa17.3■□□□□ 0.36
LIMD1-202ENST00000440097 ADAMTS7Q9UKP4 1686 aa17.3■□□□□ 0.36
LIMD1-202ENST00000440097 NUTM1Q86Y26 1132 aa17.3■□□□□ 0.36
LIMD1-202ENST00000440097 HDAC5Q9UQL6 1122 aa17.3■□□□□ 0.36
LIMD1-202ENST00000440097 GRM8O00222 908 aa17.29■□□□□ 0.36
LIMD1-202ENST00000440097 KIF2CQ99661 725 aa17.29■□□□□ 0.36
LIMD1-202ENST00000440097 MYD88Q99836 296 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms