RNA–Protein interactions for RNA: ENST00000439974.3

ITGB1-207, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-207ENST00000439974 IL17REQ8NFR9 667 aa21.45■■□□□ 1.02
ITGB1-207ENST00000439974 ZBTB1Q9Y2K1 713 aa21.45■■□□□ 1.02
ITGB1-207ENST00000439974 COL15A1P39059 1388 aa21.45■■□□□ 1.02
ITGB1-207ENST00000439974 NUDCQ9Y266 331 aa21.44■■□□□ 1.02
ITGB1-207ENST00000439974 POLRMTO00411 1230 aaKnown RBP21.43■■□□□ 1.02
ITGB1-207ENST00000439974 FCHSD2O94868 740 aa21.43■■□□□ 1.02
ITGB1-207ENST00000439974 TM4SF1P30408 202 aa21.43■■□□□ 1.02
ITGB1-207ENST00000439974 PRKAR2BP31323 418 aa21.43■■□□□ 1.02
ITGB1-207ENST00000439974 NARFQ9UHQ1 456 aa21.43■■□□□ 1.02
ITGB1-207ENST00000439974 SIPA1L3O60292 1781 aaPredicted RBP21.43■■□□□ 1.02
ITGB1-207ENST00000439974 STARD3NLO95772 234 aa21.42■■□□□ 1.02
ITGB1-207ENST00000439974 ZNF526Q8TF50 670 aaPredicted RBP21.42■■□□□ 1.02
ITGB1-207ENST00000439974 RSPH6AQ9H0K4 717 aa21.42■■□□□ 1.02
ITGB1-207ENST00000439974 KCNA3P22001 575 aa21.41■■□□□ 1.02
ITGB1-207ENST00000439974 ZNF790Q6PG37 636 aa21.41■■□□□ 1.02
ITGB1-207ENST00000439974 CEMIPQ8WUJ3 1361 aa21.4■■□□□ 1.02
ITGB1-207ENST00000439974 HEG1Q9ULI3 1381 aa21.4■■□□□ 1.02
ITGB1-207ENST00000439974 CANXP27824 592 aaKnown RBP21.4■■□□□ 1.02
ITGB1-207ENST00000439974 RALBP1Q15311 655 aa21.4■■□□□ 1.02
ITGB1-207ENST00000439974 ARHGAP27Q6ZUM4 889 aa21.4■■□□□ 1.02
ITGB1-207ENST00000439974 ZNF496Q96IT1 587 aaPredicted RBP21.4■■□□□ 1.02
ITGB1-207ENST00000439974 PHACTR3Q96KR7 559 aa21.4■■□□□ 1.02
ITGB1-207ENST00000439974 PIM2Q9P1W9 311 aa21.4■■□□□ 1.02
ITGB1-207ENST00000439974 ARFGEF1Q9Y6D6 1849 aa21.4■■□□□ 1.02
ITGB1-207ENST00000439974 TEX13AQ9BXU3 409 aaPredicted RBP21.39■■□□□ 1.01
ITGB1-207ENST00000439974 U2AF1L5P0DN76 240 aaPredicted RBP21.38■■□□□ 1.01
ITGB1-207ENST00000439974 U2AF1Q01081 240 aaKnown RBP eCLIP21.38■■□□□ 1.01
ITGB1-207ENST00000439974 NFIXQ14938 502 aa21.38■■□□□ 1.01
ITGB1-207ENST00000439974 BCL2L12Q9HB09 334 aa21.38■■□□□ 1.01
ITGB1-207ENST00000439974 AFDNP55196 1824 aaKnown RBP21.37■■□□□ 1.01
ITGB1-207ENST00000439974 A0A087WZG4 1122 aa21.37■■□□□ 1.01
ITGB1-207ENST00000439974 EIF5P55010 431 aaKnown RBP21.37■■□□□ 1.01
ITGB1-207ENST00000439974 DALRD3Q5D0E6 543 aaKnown RBP21.37■■□□□ 1.01
ITGB1-207ENST00000439974 NRXN2Q9P2S2 1712 aa21.36■■□□□ 1.01
ITGB1-207ENST00000439974 CHRNA5P30532 468 aa21.36■■□□□ 1.01
ITGB1-207ENST00000439974 FMNL2Q96PY5 1086 aa21.36■■□□□ 1.01
ITGB1-207ENST00000439974 BTBD11A6QL63 1104 aa21.35■■□□□ 1.01
ITGB1-207ENST00000439974 PRKRIP1Q9H875 184 aaPredicted RBP21.35■■□□□ 1.01
ITGB1-207ENST00000439974 MYBBP1AQ9BQG0 1328 aaKnown RBP21.34■■□□□ 1.01
ITGB1-207ENST00000439974 SERPINB2P05120 415 aa21.34■■□□□ 1.01
ITGB1-207ENST00000439974 RTF1Q92541 710 aaKnown RBP21.33■■□□□ 1.01
ITGB1-207ENST00000439974 IL6STP40189 918 aaPredicted RBP21.32■■□□□ 1
ITGB1-207ENST00000439974 SCN7AQ01118 1682 aa21.31■■□□□ 1
ITGB1-207ENST00000439974 KIF3CO14782 793 aa21.31■■□□□ 1
ITGB1-207ENST00000439974 KCNQ3O43525 872 aa21.31■■□□□ 1
ITGB1-207ENST00000439974 ZNF330Q9Y3S2 320 aaPredicted RBP21.31■■□□□ 1
ITGB1-207ENST00000439974 C9orf131Q5VYM1 1079 aa21.3■■□□□ 1
ITGB1-207ENST00000439974 BICDL1Q6ZP65 573 aa21.3■■□□□ 1
ITGB1-207ENST00000439974 NPM2Q86SE8 214 aaKnown RBP21.3■■□□□ 1
ITGB1-207ENST00000439974 DLEC1Q9Y238 1755 aa21.29■■□□□ 1
ITGB1-207ENST00000439974 HTATSF1O43719 755 aaKnown RBP21.29■■□□□ 1
ITGB1-207ENST00000439974 A1BGP04217 495 aa21.29■■□□□ 1
ITGB1-207ENST00000439974 MCM10Q7L590 875 aa21.29■■□□□ 1
ITGB1-207ENST00000439974 TBC1D2BQ9UPU7 963 aa21.29■■□□□ 1
ITGB1-207ENST00000439974 TBC1D9BQ66K14 1250 aa21.28■■□□□ 1
ITGB1-207ENST00000439974 CARMIL3Q8ND23 1372 aa21.27■■□□□ 1
ITGB1-207ENST00000439974 CEP350Q5VT06 3117 aa21.26■□□□□ 0.99
ITGB1-207ENST00000439974 DCTN1Q14203 1278 aa21.26■□□□□ 0.99
ITGB1-207ENST00000439974 C2CD5Q86YS7 1000 aa21.26■□□□□ 0.99
ITGB1-207ENST00000439974 USP16Q9Y5T5 823 aa21.26■□□□□ 0.99
ITGB1-207ENST00000439974 SBF1O95248 1867 aa21.25■□□□□ 0.99
ITGB1-207ENST00000439974 NEFMP07197 916 aa21.25■□□□□ 0.99
ITGB1-207ENST00000439974 SNRPA1P09661 255 aaKnown RBP21.25■□□□□ 0.99
ITGB1-207ENST00000439974 HSPA6P17066 643 aa21.25■□□□□ 0.99
ITGB1-207ENST00000439974 RNF181Q9P0P0 153 aa21.25■□□□□ 0.99
ITGB1-207ENST00000439974 H0YIN7 160 aa21.24■□□□□ 0.99
ITGB1-207ENST00000439974 CAMTA2O94983 1202 aa21.24■□□□□ 0.99
ITGB1-207ENST00000439974 CCDC184Q52MB2 194 aa21.24■□□□□ 0.99
ITGB1-207ENST00000439974 DZIP3Q86Y13 1208 aaKnown RBP21.24■□□□□ 0.99
ITGB1-207ENST00000439974 TTLL6Q8N841 843 aa21.24■□□□□ 0.99
ITGB1-207ENST00000439974 BCORQ6W2J9 1755 aa21.23■□□□□ 0.99
ITGB1-207ENST00000439974 PRAMEF22A3QJZ6 481 aa21.23■□□□□ 0.99
ITGB1-207ENST00000439974 NMRK2Q9NPI5 230 aa21.23■□□□□ 0.99
ITGB1-207ENST00000439974 PDZRN3Q9UPQ7 1066 aa21.23■□□□□ 0.99
ITGB1-207ENST00000439974 ANKRD31Q8N7Z5 1873 aa21.22■□□□□ 0.99
ITGB1-207ENST00000439974 TAF7Q15545 349 aaPredicted RBP21.22■□□□□ 0.99
ITGB1-207ENST00000439974 PRR5LQ6MZQ0 368 aa21.22■□□□□ 0.99
ITGB1-207ENST00000439974 SETDB2Q96T68 719 aa21.22■□□□□ 0.99
ITGB1-207ENST00000439974 BRIP1Q9BX63 1249 aa21.22■□□□□ 0.99
ITGB1-207ENST00000439974 ANP32CO43423 234 aa21.21■□□□□ 0.99
ITGB1-207ENST00000439974 TOMM70O94826 608 aa21.21■□□□□ 0.99
ITGB1-207ENST00000439974 PDE6BP35913 854 aa21.21■□□□□ 0.99
ITGB1-207ENST00000439974 PIP4K2AP48426 406 aaPredicted RBP21.21■□□□□ 0.99
ITGB1-207ENST00000439974 DLG5Q8TDM6 1919 aa21.21■□□□□ 0.99
ITGB1-207ENST00000439974 RASSF7Q02833 373 aa21.2■□□□□ 0.98
ITGB1-207ENST00000439974 KDM2BQ8NHM5 1336 aa21.2■□□□□ 0.98
ITGB1-207ENST00000439974 NPHP1O15259 732 aa21.19■□□□□ 0.98
ITGB1-207ENST00000439974 CCDC146Q8IYE0 955 aa21.19■□□□□ 0.98
ITGB1-207ENST00000439974 CNBD1Q8NA66 436 aa21.19■□□□□ 0.98
ITGB1-207ENST00000439974 PLEKHF1Q96S99 279 aa21.19■□□□□ 0.98
ITGB1-207ENST00000439974 LMNB1P20700 586 aa21.18■□□□□ 0.98
ITGB1-207ENST00000439974 ST5P78524 1137 aa21.18■□□□□ 0.98
ITGB1-207ENST00000439974 CLEC4GQ6UXB4 293 aa21.18■□□□□ 0.98
ITGB1-207ENST00000439974 CCDC24Q8N4L8 307 aa21.18■□□□□ 0.98
ITGB1-207ENST00000439974 PNISRQ8TF01 805 aaKnown RBP21.18■□□□□ 0.98
ITGB1-207ENST00000439974 ZNF622Q969S3 477 aaKnown RBP eCLIP21.18■□□□□ 0.98
ITGB1-207ENST00000439974 ZNF652Q9Y2D9 606 aa21.18■□□□□ 0.98
ITGB1-207ENST00000439974 ZC3H4Q9UPT8 1303 aaKnown RBP21.18■□□□□ 0.98
ITGB1-207ENST00000439974 COL11A2P13942 1736 aaPredicted RBP21.18■□□□□ 0.98
ITGB1-207ENST00000439974 WDR43Q15061 677 aaKnown RBP eCLIP21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms