RNA–Protein interactions for RNA: ENST00000439555.2

IRF1-204, Transcript of interferon regulatory factor 1, humanhuman

TSL 5

Gene IRF1, Length 524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-204ENST00000439555 RNMTO43148 476 aaKnown RBP15.44■□□□□ 0.06
IRF1-204ENST00000439555 PTCD1O75127 700 aaKnown RBP15.44■□□□□ 0.06
IRF1-204ENST00000439555 MTHFSDQ2M296 383 aaKnown RBP15.44■□□□□ 0.06
IRF1-204ENST00000439555 LGR6Q9HBX8 967 aa15.43■□□□□ 0.06
IRF1-204ENST00000439555 RNF181Q9P0P0 153 aa15.43■□□□□ 0.06
IRF1-204ENST00000439555 CFAP53Q96M91 514 aa15.42■□□□□ 0.06
IRF1-204ENST00000439555 DICER1Q9UPY3 1922 aaKnown RBP15.42■□□□□ 0.06
IRF1-204ENST00000439555 COL3A1P02461 1466 aaPredicted RBP15.41■□□□□ 0.06
IRF1-204ENST00000439555 HSPA1AP0DMV8 641 aaKnown RBP15.41■□□□□ 0.06
IRF1-204ENST00000439555 HSPA1BP0DMV9 641 aaKnown RBP15.41■□□□□ 0.06
IRF1-204ENST00000439555 VEGFAP15692 232 aaPredicted RBP15.41■□□□□ 0.06
IRF1-204ENST00000439555 GAS2L2Q8NHY3 880 aa15.41■□□□□ 0.06
IRF1-204ENST00000439555 DLEC1Q9Y238 1755 aa15.4■□□□□ 0.06
IRF1-204ENST00000439555 U2SURPO15042 1029 aaKnown RBP15.4■□□□□ 0.06
IRF1-204ENST00000439555 CRKLP46109 303 aaKnown RBP15.4■□□□□ 0.06
IRF1-204ENST00000439555 NUDCQ9Y266 331 aa15.4■□□□□ 0.06
IRF1-204ENST00000439555 AFDNP55196 1824 aaKnown RBP15.4■□□□□ 0.06
IRF1-204ENST00000439555 GLTPD2A6NH11 291 aa15.39■□□□□ 0.05
IRF1-204ENST00000439555 VSIG10Q8N0Z9 540 aa15.39■□□□□ 0.05
IRF1-204ENST00000439555 MRC1P22897 1456 aa15.39■□□□□ 0.05
IRF1-204ENST00000439555 GNAT3A8MTJ3 354 aa15.38■□□□□ 0.05
IRF1-204ENST00000439555 TM4SF1P30408 202 aa15.38■□□□□ 0.05
IRF1-204ENST00000439555 INTS5Q6P9B9 1019 aaKnown RBP15.38■□□□□ 0.05
IRF1-204ENST00000439555 LMNB1P20700 586 aa15.37■□□□□ 0.05
IRF1-204ENST00000439555 PPP2R1AP30153 589 aa15.37■□□□□ 0.05
IRF1-204ENST00000439555 CNGB1Q14028 1251 aaPredicted RBP15.37■□□□□ 0.05
IRF1-204ENST00000439555 ADAMTS7Q9UKP4 1686 aa15.37■□□□□ 0.05
IRF1-204ENST00000439555 NRXN2Q9P2S2 1712 aa15.37■□□□□ 0.05
IRF1-204ENST00000439555 CYP19A1P11511 503 aaPredicted RBP15.36■□□□□ 0.05
IRF1-204ENST00000439555 DNAJC10Q8IXB1 793 aa15.36■□□□□ 0.05
IRF1-204ENST00000439555 IL17REQ8NFR9 667 aa15.36■□□□□ 0.05
IRF1-204ENST00000439555 RSPH6AQ9H0K4 717 aa15.36■□□□□ 0.05
IRF1-204ENST00000439555 USP42Q9H9J4 1324 aaKnown RBP15.36■□□□□ 0.05
IRF1-204ENST00000439555 TIAM2Q8IVF5 1701 aa15.35■□□□□ 0.05
IRF1-204ENST00000439555 DDR1Q08345 913 aa15.35■□□□□ 0.05
IRF1-204ENST00000439555 SLC39A6Q13433 755 aa15.35■□□□□ 0.05
IRF1-204ENST00000439555 FKBP8Q14318 412 aa15.35■□□□□ 0.05
IRF1-204ENST00000439555 POLRMTO00411 1230 aaKnown RBP15.34■□□□□ 0.05
IRF1-204ENST00000439555 CHRNA5P30532 468 aa15.34■□□□□ 0.05
IRF1-204ENST00000439555 TEFQ10587 303 aa15.34■□□□□ 0.05
IRF1-204ENST00000439555 TJP1Q07157 1748 aa15.34■□□□□ 0.05
IRF1-204ENST00000439555 PRKAR2BP31323 418 aa15.33■□□□□ 0.04
IRF1-204ENST00000439555 TTC5Q8N0Z6 440 aa15.33■□□□□ 0.04
IRF1-204ENST00000439555 PHACTR3Q96KR7 559 aa15.33■□□□□ 0.04
IRF1-204ENST00000439555 TEX13AQ9BXU3 409 aaPredicted RBP15.33■□□□□ 0.04
IRF1-204ENST00000439555 SOS1Q07889 1333 aaPredicted RBP15.33■□□□□ 0.04
IRF1-204ENST00000439555 SCN11AQ9UI33 1791 aa15.33■□□□□ 0.04
IRF1-204ENST00000439555 CEMIPQ8WUJ3 1361 aa15.33■□□□□ 0.04
IRF1-204ENST00000439555 FER1L6Q2WGJ9 1857 aa15.32■□□□□ 0.04
IRF1-204ENST00000439555 STARD3NLO95772 234 aa15.32■□□□□ 0.04
IRF1-204ENST00000439555 U2AF1L5P0DN76 240 aaPredicted RBP15.32■□□□□ 0.04
IRF1-204ENST00000439555 U2AF1Q01081 240 aaKnown RBP eCLIP15.32■□□□□ 0.04
IRF1-204ENST00000439555 DPY19L2Q6NUT2 758 aa15.32■□□□□ 0.04
IRF1-204ENST00000439555 ZNF790Q6PG37 636 aa15.32■□□□□ 0.04
IRF1-204ENST00000439555 POTECB2RU33 542 aa15.31■□□□□ 0.04
IRF1-204ENST00000439555 ZPR1O75312 459 aa15.31■□□□□ 0.04
IRF1-204ENST00000439555 SLC34A2O95436 690 aa15.31■□□□□ 0.04
IRF1-204ENST00000439555 PRDM10Q9NQV6 1147 aa15.31■□□□□ 0.04
IRF1-204ENST00000439555 CREBZFQ9NS37 354 aa15.31■□□□□ 0.04
IRF1-204ENST00000439555 SRP68Q9UHB9 627 aaKnown RBP15.31■□□□□ 0.04
IRF1-204ENST00000439555 VIRMAQ69YN4 1812 aaKnown RBP15.31■□□□□ 0.04
IRF1-204ENST00000439555 HTATSF1O43719 755 aaKnown RBP15.3■□□□□ 0.04
IRF1-204ENST00000439555 TTLL6Q8N841 843 aa15.3■□□□□ 0.04
IRF1-204ENST00000439555 ZNF496Q96IT1 587 aaPredicted RBP15.3■□□□□ 0.04
IRF1-204ENST00000439555 NARFQ9UHQ1 456 aa15.3■□□□□ 0.04
IRF1-204ENST00000439555 ZBTB1Q9Y2K1 713 aa15.29■□□□□ 0.04
IRF1-204ENST00000439555 SCN4AP35499 1836 aa15.29■□□□□ 0.04
IRF1-204ENST00000439555 HEG1Q9ULI3 1381 aa15.28■□□□□ 0.04
IRF1-204ENST00000439555 EIF5P55010 431 aaKnown RBP15.28■□□□□ 0.04
IRF1-204ENST00000439555 RASSF7Q02833 373 aa15.28■□□□□ 0.04
IRF1-204ENST00000439555 RTF1Q92541 710 aaKnown RBP15.28■□□□□ 0.04
IRF1-204ENST00000439555 FMNL2Q96PY5 1086 aa15.28■□□□□ 0.04
IRF1-204ENST00000439555 PDZRN3Q9UPQ7 1066 aa15.28■□□□□ 0.04
IRF1-204ENST00000439555 A0A087WZG4 1122 aa15.27■□□□□ 0.04
IRF1-204ENST00000439555 BTBD11A6QL63 1104 aa15.27■□□□□ 0.04
IRF1-204ENST00000439555 USPL1Q5W0Q7 1092 aa15.27■□□□□ 0.04
IRF1-204ENST00000439555 COL15A1P39059 1388 aa15.26■□□□□ 0.03
IRF1-204ENST00000439555 CHADLQ6NUI6 762 aa15.26■□□□□ 0.03
IRF1-204ENST00000439555 H0YIN7 160 aa15.25■□□□□ 0.03
IRF1-204ENST00000439555 NEFMP07197 916 aa15.25■□□□□ 0.03
IRF1-204ENST00000439555 CANXP27824 592 aaKnown RBP15.25■□□□□ 0.03
IRF1-204ENST00000439555 IL6STP40189 918 aaPredicted RBP15.25■□□□□ 0.03
IRF1-204ENST00000439555 NFIXQ14938 502 aa15.25■□□□□ 0.03
IRF1-204ENST00000439555 ANKRD31Q8N7Z5 1873 aa15.25■□□□□ 0.03
IRF1-204ENST00000439555 NFKBIEO00221 500 aa15.24■□□□□ 0.03
IRF1-204ENST00000439555 SERPINB2P05120 415 aa15.24■□□□□ 0.03
IRF1-204ENST00000439555 PNNQ9H307 717 aaKnown RBP15.24■□□□□ 0.03
IRF1-204ENST00000439555 BCL2L12Q9HB09 334 aa15.24■□□□□ 0.03
IRF1-204ENST00000439555 FOXN1O15353 648 aa15.23■□□□□ 0.03
IRF1-204ENST00000439555 CTCFP49711 727 aaPredicted RBP15.23■□□□□ 0.03
IRF1-204ENST00000439555 RALBP1Q15311 655 aa15.23■□□□□ 0.03
IRF1-204ENST00000439555 PCDH10Q9P2E7 1040 aa15.23■□□□□ 0.03
IRF1-204ENST00000439555 CNTNAP1P78357 1384 aa15.23■□□□□ 0.03
IRF1-204ENST00000439555 LTBP3Q9NS15 1303 aa15.22■□□□□ 0.03
IRF1-204ENST00000439555 TAF7Q15545 349 aaPredicted RBP15.22■□□□□ 0.03
IRF1-204ENST00000439555 MCM10Q7L590 875 aa15.22■□□□□ 0.03
IRF1-204ENST00000439555 C2CD5Q86YS7 1000 aa15.22■□□□□ 0.03
IRF1-204ENST00000439555 PLEKHF1Q96S99 279 aa15.22■□□□□ 0.03
IRF1-204ENST00000439555 ARFGEF2Q9Y6D5 1785 aa15.21■□□□□ 0.03
IRF1-204ENST00000439555 KCNQ3O43525 872 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms