RNA–Protein interactions for RNA: ENST00000439510.2

CDC42EP4-202, Transcript of CDC42 effector protein 4, humanhuman

TSL 2 BASIC

Gene CDC42EP4, Length 2,879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-202ENST00000439510 TSPY26PQ9H489 355 aa18.51■□□□□ 0.55
CDC42EP4-202ENST00000439510 ANO2Q9NQ90 1003 aa18.51■□□□□ 0.55
CDC42EP4-202ENST00000439510 PNMA6EA0A0J9YXQ4 647 aa18.5■□□□□ 0.55
CDC42EP4-202ENST00000439510 FOXO3O43524 673 aa18.5■□□□□ 0.55
CDC42EP4-202ENST00000439510 STK31Q9BXU1 1019 aa18.5■□□□□ 0.55
CDC42EP4-202ENST00000439510 PXDNLA1KZ92 1463 aa18.5■□□□□ 0.55
CDC42EP4-202ENST00000439510 ZMYND15Q9H091 742 aa18.49■□□□□ 0.55
CDC42EP4-202ENST00000439510 TCHHQ07283 1943 aa18.49■□□□□ 0.55
CDC42EP4-202ENST00000439510 FLIIQ13045 1269 aa18.48■□□□□ 0.55
CDC42EP4-202ENST00000439510 TRIM6-TRIM34B2RNG4 842 aa18.48■□□□□ 0.55
CDC42EP4-202ENST00000439510 PHF14O94880 888 aa18.48■□□□□ 0.55
CDC42EP4-202ENST00000439510 RNF214Q8ND24 703 aa18.48■□□□□ 0.55
CDC42EP4-202ENST00000439510 RILPL2Q969X0 211 aa18.48■□□□□ 0.55
CDC42EP4-202ENST00000439510 MAP7D2Q96T17 732 aa18.48■□□□□ 0.55
CDC42EP4-202ENST00000439510 WDR33Q9C0J8 1336 aaKnown RBP18.47■□□□□ 0.55
CDC42EP4-202ENST00000439510 SBNO1A3KN83 1393 aa18.47■□□□□ 0.55
CDC42EP4-202ENST00000439510 FLT4P35916 1363 aa18.47■□□□□ 0.55
CDC42EP4-202ENST00000439510 CCDC30Q5VVM6 783 aa18.47■□□□□ 0.55
CDC42EP4-202ENST00000439510 HTATSF1O43719 755 aaKnown RBP18.46■□□□□ 0.55
CDC42EP4-202ENST00000439510 HSPA4P34932 840 aa18.46■□□□□ 0.55
CDC42EP4-202ENST00000439510 UNC5CLQ8IV45 518 aa18.46■□□□□ 0.55
CDC42EP4-202ENST00000439510 TMEM87AQ8NBN3 555 aa18.46■□□□□ 0.55
CDC42EP4-202ENST00000439510 BCL11BQ9C0K0 894 aaPredicted RBP18.46■□□□□ 0.55
CDC42EP4-202ENST00000439510 SOS1Q07889 1333 aaPredicted RBP18.46■□□□□ 0.55
CDC42EP4-202ENST00000439510 UQCRHLA0A096LP55 91 aa18.46■□□□□ 0.55
CDC42EP4-202ENST00000439510 UQCRHP07919 91 aa18.46■□□□□ 0.55
CDC42EP4-202ENST00000439510 IGSF1Q8N6C5 1336 aa18.46■□□□□ 0.55
CDC42EP4-202ENST00000439510 ZNF335Q9H4Z2 1342 aaPredicted RBP18.46■□□□□ 0.55
CDC42EP4-202ENST00000439510 FKBP5Q13451 457 aaPredicted RBP18.45■□□□□ 0.54
CDC42EP4-202ENST00000439510 NWD1Q149M9 1564 aa18.45■□□□□ 0.54
CDC42EP4-202ENST00000439510 NGDNQ8NEJ9 315 aaKnown RBP18.45■□□□□ 0.54
CDC42EP4-202ENST00000439510 UPF3BQ9BZI7 483 aaKnown RBP18.45■□□□□ 0.54
CDC42EP4-202ENST00000439510 NOL8Q76FK4 1167 aaKnown RBP18.44■□□□□ 0.54
CDC42EP4-202ENST00000439510 FAM184AQ8NB25 1140 aa18.44■□□□□ 0.54
CDC42EP4-202ENST00000439510 ADGRL3Q9HAR2 1447 aa18.44■□□□□ 0.54
CDC42EP4-202ENST00000439510 DYNC1I1O14576 645 aa18.44■□□□□ 0.54
CDC42EP4-202ENST00000439510 GADD45BO75293 160 aaPredicted RBP18.44■□□□□ 0.54
CDC42EP4-202ENST00000439510 USP48Q86UV5 1035 aa18.44■□□□□ 0.54
CDC42EP4-202ENST00000439510 LRRFIP2Q9Y608 721 aaKnown RBP18.44■□□□□ 0.54
CDC42EP4-202ENST00000439510 TTC21AQ8NDW8 1320 aa18.44■□□□□ 0.54
CDC42EP4-202ENST00000439510 RPAP1Q9BWH6 1393 aaPredicted RBP18.44■□□□□ 0.54
CDC42EP4-202ENST00000439510 UVSSAQ2YD98 709 aa18.44■□□□□ 0.54
CDC42EP4-202ENST00000439510 SASS6Q6UVJ0 657 aa18.44■□□□□ 0.54
CDC42EP4-202ENST00000439510 IL25Q9H293 177 aa18.44■□□□□ 0.54
CDC42EP4-202ENST00000439510 TMEM94Q12767 1356 aa18.44■□□□□ 0.54
CDC42EP4-202ENST00000439510 CRYBG1Q9Y4K1 1723 aa18.43■□□□□ 0.54
CDC42EP4-202ENST00000439510 RBM10P98175 930 aaKnown RBP18.43■□□□□ 0.54
CDC42EP4-202ENST00000439510 SSH3Q8TE77 659 aa18.43■□□□□ 0.54
CDC42EP4-202ENST00000439510 ESCO1Q5FWF5 840 aa18.42■□□□□ 0.54
CDC42EP4-202ENST00000439510 EYA1Q99502 592 aa18.42■□□□□ 0.54
CDC42EP4-202ENST00000439510 USP44Q9H0E7 712 aa18.42■□□□□ 0.54
CDC42EP4-202ENST00000439510 RAD50Q92878 1312 aa18.41■□□□□ 0.54
CDC42EP4-202ENST00000439510 GDPD2Q9HCC8 539 aa18.41■□□□□ 0.54
CDC42EP4-202ENST00000439510 SOX12O15370 315 aa18.41■□□□□ 0.54
CDC42EP4-202ENST00000439510 KIAA2012Q0VF49 1180 aa18.41■□□□□ 0.54
CDC42EP4-202ENST00000439510 FAM13BQ9NYF5 915 aa18.41■□□□□ 0.54
CDC42EP4-202ENST00000439510 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.41■□□□□ 0.54
CDC42EP4-202ENST00000439510 RAB11FIP3O75154 756 aa18.4■□□□□ 0.54
CDC42EP4-202ENST00000439510 ORAI2Q96SN7 254 aa18.4■□□□□ 0.54
CDC42EP4-202ENST00000439510 MTERF4Q7Z6M4 381 aaKnown RBP18.4■□□□□ 0.54
CDC42EP4-202ENST00000439510 TTC14Q96N46 770 aa18.4■□□□□ 0.54
CDC42EP4-202ENST00000439510 PTMAP06454 111 aaKnown RBP18.4■□□□□ 0.54
CDC42EP4-202ENST00000439510 CCDC183Q5T5S1 534 aa18.4■□□□□ 0.54
CDC42EP4-202ENST00000439510 BABAM1Q9NWV8 329 aa18.4■□□□□ 0.54
CDC42EP4-202ENST00000439510 PIK3C2AO00443 1686 aa18.39■□□□□ 0.54
CDC42EP4-202ENST00000439510 UBTFL1P0CB47 393 aaPredicted RBP18.39■□□□□ 0.53
CDC42EP4-202ENST00000439510 NUTM2GQ5VZR2 741 aa18.39■□□□□ 0.53
CDC42EP4-202ENST00000439510 PI4K2BQ8TCG2 481 aa18.39■□□□□ 0.53
CDC42EP4-202ENST00000439510 GNAT3A8MTJ3 354 aa18.39■□□□□ 0.53
CDC42EP4-202ENST00000439510 SGSM2O43147 1006 aa18.39■□□□□ 0.53
CDC42EP4-202ENST00000439510 POLA2Q14181 598 aa18.39■□□□□ 0.53
CDC42EP4-202ENST00000439510 LETM1O95202 739 aaPredicted RBP18.38■□□□□ 0.53
CDC42EP4-202ENST00000439510 FGD1P98174 961 aa18.38■□□□□ 0.53
CDC42EP4-202ENST00000439510 IL1RAPL2Q9NP60 686 aa18.38■□□□□ 0.53
CDC42EP4-202ENST00000439510 SNX14Q9Y5W7 946 aa18.38■□□□□ 0.53
CDC42EP4-202ENST00000439510 ZSCAN22P10073 491 aaPredicted RBP18.37■□□□□ 0.53
CDC42EP4-202ENST00000439510 FOXD4L6Q3SYB3 417 aaPredicted RBP18.37■□□□□ 0.53
CDC42EP4-202ENST00000439510 FOXD4L3Q6VB84 417 aaPredicted RBP18.37■□□□□ 0.53
CDC42EP4-202ENST00000439510 LSG1Q9H089 658 aaKnown RBP18.37■□□□□ 0.53
CDC42EP4-202ENST00000439510 PHF8Q9UPP1 1060 aa18.37■□□□□ 0.53
CDC42EP4-202ENST00000439510 NUTM1Q86Y26 1132 aa18.36■□□□□ 0.53
CDC42EP4-202ENST00000439510 UBE2HP62256 183 aa18.36■□□□□ 0.53
CDC42EP4-202ENST00000439510 C19orf44Q9H6X5 657 aa18.36■□□□□ 0.53
CDC42EP4-202ENST00000439510 MAP3K5Q99683 1374 aa18.36■□□□□ 0.53
CDC42EP4-202ENST00000439510 NECTIN2Q92692 538 aa18.36■□□□□ 0.53
CDC42EP4-202ENST00000439510 CNPY2Q9Y2B0 182 aa18.36■□□□□ 0.53
CDC42EP4-202ENST00000439510 XIRP1Q702N8 1843 aaKnown RBP18.35■□□□□ 0.53
CDC42EP4-202ENST00000439510 AMPHP49418 695 aa18.35■□□□□ 0.53
CDC42EP4-202ENST00000439510 RHPN1Q8TCX5 695 aa18.35■□□□□ 0.53
CDC42EP4-202ENST00000439510 PIBF1Q8WXW3 757 aa18.35■□□□□ 0.53
CDC42EP4-202ENST00000439510 MARF1Q9Y4F3 1742 aaKnown RBP18.35■□□□□ 0.53
CDC42EP4-202ENST00000439510 ANKARQ7Z5J8 1434 aa18.35■□□□□ 0.53
CDC42EP4-202ENST00000439510 PPP1R42Q7Z4L9 355 aa18.35■□□□□ 0.53
CDC42EP4-202ENST00000439510 LIMCH1Q9UPQ0 1083 aa18.35■□□□□ 0.53
CDC42EP4-202ENST00000439510 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.35■□□□□ 0.53
CDC42EP4-202ENST00000439510 STX6O43752 255 aa18.34■□□□□ 0.53
CDC42EP4-202ENST00000439510 ATF3P18847 181 aa18.34■□□□□ 0.53
CDC42EP4-202ENST00000439510 AK2P54819 239 aa18.34■□□□□ 0.53
CDC42EP4-202ENST00000439510 RUFY3Q7L099 469 aa18.34■□□□□ 0.53
CDC42EP4-202ENST00000439510 IL17REQ8NFR9 667 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms