RNA–Protein interactions for RNA: ENST00000439117.6

TSC2-206, Transcript of TSC complex subunit 2, humanhuman

TSL 1 (best)

Gene TSC2, Length 5,073 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-206ENST00000439117 EPB41L2O43491 1005 aaKnown RBP17.52■□□□□ 0.39
TSC2-206ENST00000439117 GPATCH11Q8N954 259 aa17.52■□□□□ 0.39
TSC2-206ENST00000439117 TTC21AQ8NDW8 1320 aa17.51■□□□□ 0.39
TSC2-206ENST00000439117 SPDYE4A6NLX3 237 aa17.51■□□□□ 0.39
TSC2-206ENST00000439117 HMGB2P26583 209 aaKnown RBP17.51■□□□□ 0.39
TSC2-206ENST00000439117 C16orf45Q96MC5 204 aaPredicted RBP17.51■□□□□ 0.39
TSC2-206ENST00000439117 SCAND2PQ9GZW5 306 aaPredicted RBP17.51■□□□□ 0.39
TSC2-206ENST00000439117 LRRFIP2Q9Y608 721 aaKnown RBP17.51■□□□□ 0.39
TSC2-206ENST00000439117 NKTRP30414 1462 aaKnown RBP17.51■□□□□ 0.39
TSC2-206ENST00000439117 POTEB2H3BUK9 544 aa17.51■□□□□ 0.39
TSC2-206ENST00000439117 SSFA2P28290 1259 aa17.51■□□□□ 0.39
TSC2-206ENST00000439117 CFAP43Q8NDM7 1665 aa17.51■□□□□ 0.39
TSC2-206ENST00000439117 PLEKHH1Q9ULM0 1364 aa17.51■□□□□ 0.39
TSC2-206ENST00000439117 IL1RAPL2Q9NP60 686 aa17.51■□□□□ 0.39
TSC2-206ENST00000439117 ANO10Q9NW15 660 aa17.51■□□□□ 0.39
TSC2-206ENST00000439117 STIM1Q13586 685 aa17.5■□□□□ 0.39
TSC2-206ENST00000439117 HS1BP3Q53T59 392 aa17.5■□□□□ 0.39
TSC2-206ENST00000439117 BLOC1S2Q6QNY1 142 aa17.5■□□□□ 0.39
TSC2-206ENST00000439117 CFAP100Q494V2 611 aa17.5■□□□□ 0.39
TSC2-206ENST00000439117 SLC3A2P08195 630 aaKnown RBP17.5■□□□□ 0.39
TSC2-206ENST00000439117 CLIP2Q9UDT6 1046 aa17.5■□□□□ 0.39
TSC2-206ENST00000439117 GSDMDP57764 484 aa17.49■□□□□ 0.39
TSC2-206ENST00000439117 MSH6P52701 1360 aa17.49■□□□□ 0.39
TSC2-206ENST00000439117 CCDC94Q9BW85 323 aaPredicted RBP17.49■□□□□ 0.39
TSC2-206ENST00000439117 PDRG1Q9NUG6 133 aa17.49■□□□□ 0.39
TSC2-206ENST00000439117 GTF2A1P52655 376 aaPredicted RBP17.48■□□□□ 0.39
TSC2-206ENST00000439117 SMAP1Q8IYB5 467 aaPredicted RBP17.48■□□□□ 0.39
TSC2-206ENST00000439117 NEFHP12036 1026 aa17.48■□□□□ 0.39
TSC2-206ENST00000439117 ATP2B1P20020 1258 aa17.48■□□□□ 0.39
TSC2-206ENST00000439117 IPO4Q8TEX9 1081 aaKnown RBP17.48■□□□□ 0.39
TSC2-206ENST00000439117 PUS7Q96PZ0 661 aaKnown RBP17.48■□□□□ 0.39
TSC2-206ENST00000439117 EXOC6BQ9Y2D4 811 aa17.48■□□□□ 0.39
TSC2-206ENST00000439117 ABCA5Q8WWZ7 1642 aa17.48■□□□□ 0.39
TSC2-206ENST00000439117 ADCY5O95622 1261 aa17.48■□□□□ 0.39
TSC2-206ENST00000439117 NGLY1Q96IV0 654 aa17.48■□□□□ 0.39
TSC2-206ENST00000439117 DBF4Q9UBU7 674 aaPredicted RBP17.48■□□□□ 0.39
TSC2-206ENST00000439117 EXOC5O00471 708 aa17.47■□□□□ 0.39
TSC2-206ENST00000439117 KIF5CO60282 957 aa17.47■□□□□ 0.39
TSC2-206ENST00000439117 ZSCAN25Q6NSZ9 544 aa17.47■□□□□ 0.39
TSC2-206ENST00000439117 IFNL2Q8IZJ0 200 aa17.47■□□□□ 0.39
TSC2-206ENST00000439117 ZKSCAN5Q9Y2L8 839 aa17.47■□□□□ 0.39
TSC2-206ENST00000439117 BAG4O95429 457 aaKnown RBP17.47■□□□□ 0.39
TSC2-206ENST00000439117 ANKRD24Q8TF21 1146 aa17.47■□□□□ 0.39
TSC2-206ENST00000439117 NACAP1Q9BZK3 213 aa17.47■□□□□ 0.39
TSC2-206ENST00000439117 ZMYM3Q14202 1370 aa17.47■□□□□ 0.39
TSC2-206ENST00000439117 SMARCC1Q92922 1105 aaPredicted RBP17.47■□□□□ 0.39
TSC2-206ENST00000439117 CTAGE5O15320 804 aa17.47■□□□□ 0.39
TSC2-206ENST00000439117 CAVIN2O95810 425 aa17.47■□□□□ 0.39
TSC2-206ENST00000439117 SAMD1Q6SPF0 538 aaPredicted RBP17.47■□□□□ 0.39
TSC2-206ENST00000439117 CASQ1P31415 396 aa17.46■□□□□ 0.39
TSC2-206ENST00000439117 FKBP4Q02790 459 aaKnown RBP eCLIP17.46■□□□□ 0.39
TSC2-206ENST00000439117 ZNF652Q9Y2D9 606 aa17.46■□□□□ 0.39
TSC2-206ENST00000439117 MAP4K4O95819 1239 aaPredicted RBP17.46■□□□□ 0.39
TSC2-206ENST00000439117 IRX3P78415 501 aaPredicted RBP17.46■□□□□ 0.39
TSC2-206ENST00000439117 KRT32Q14532 448 aa17.46■□□□□ 0.39
TSC2-206ENST00000439117 BICDL1Q6ZP65 573 aa17.46■□□□□ 0.39
TSC2-206ENST00000439117 PPIP5K1Q6PFW1 1433 aa17.46■□□□□ 0.39
TSC2-206ENST00000439117 FBLN1P23142 703 aa17.46■□□□□ 0.39
TSC2-206ENST00000439117 ENOX2Q16206 610 aaKnown RBP17.46■□□□□ 0.39
TSC2-206ENST00000439117 CTR9Q6PD62 1173 aa17.46■□□□□ 0.39
TSC2-206ENST00000439117 TAX1BP1Q86VP1 789 aa17.46■□□□□ 0.39
TSC2-206ENST00000439117 KIF1BPQ96EK5 621 aa17.46■□□□□ 0.39
TSC2-206ENST00000439117 TBC1D32Q96NH3 1257 aa17.46■□□□□ 0.39
TSC2-206ENST00000439117 CCDC85AQ96PX6 553 aaPredicted RBP17.46■□□□□ 0.39
TSC2-206ENST00000439117 MTMR7Q9Y216 660 aa17.46■□□□□ 0.39
TSC2-206ENST00000439117 PBRM1Q86U86 1689 aa17.46■□□□□ 0.39
TSC2-206ENST00000439117 NPHP3Q7Z494 1330 aa17.46■□□□□ 0.39
TSC2-206ENST00000439117 IVLP07476 585 aa17.45■□□□□ 0.38
TSC2-206ENST00000439117 IGHMBP2P38935 993 aaKnown RBP17.45■□□□□ 0.38
TSC2-206ENST00000439117 KIF4BQ2VIQ3 1234 aa17.45■□□□□ 0.38
TSC2-206ENST00000439117 ZFYVE27Q5T4F4 411 aa17.45■□□□□ 0.38
TSC2-206ENST00000439117 DNAAF4Q8WXU2 420 aa17.45■□□□□ 0.38
TSC2-206ENST00000439117 HYPKQ9NX55 129 aa17.45■□□□□ 0.38
TSC2-206ENST00000439117 LMAN1P49257 510 aa17.45■□□□□ 0.38
TSC2-206ENST00000439117 STK3Q13188 491 aa17.45■□□□□ 0.38
TSC2-206ENST00000439117 SEPT7Q16181 437 aaKnown RBP17.45■□□□□ 0.38
TSC2-206ENST00000439117 MYD88Q99836 296 aa17.45■□□□□ 0.38
TSC2-206ENST00000439117 GOLGA6L9A6NEM1 432 aa17.45■□□□□ 0.38
TSC2-206ENST00000439117 MNAT1P51948 309 aa17.45■□□□□ 0.38
TSC2-206ENST00000439117 NOLC1Q14978 699 aaKnown RBP eCLIP17.45■□□□□ 0.38
TSC2-206ENST00000439117 CHRNA2Q15822 529 aa17.45■□□□□ 0.38
TSC2-206ENST00000439117 ANKRD18AQ8IVF6 992 aa17.45■□□□□ 0.38
TSC2-206ENST00000439117 F6X3S4 739 aa17.44■□□□□ 0.38
TSC2-206ENST00000439117 DDX19AQ9NUU7 478 aaKnown RBP17.44■□□□□ 0.38
TSC2-206ENST00000439117 IL16Q14005 1332 aa17.44■□□□□ 0.38
TSC2-206ENST00000439117 IMMTQ16891 758 aaKnown RBP17.44■□□□□ 0.38
TSC2-206ENST00000439117 JAKMIP1Q96N16 626 aaKnown RBP17.44■□□□□ 0.38
TSC2-206ENST00000439117 C20orf194Q5TEA3 1177 aa17.44■□□□□ 0.38
TSC2-206ENST00000439117 LRSAM1Q6UWE0 723 aa17.43■□□□□ 0.38
TSC2-206ENST00000439117 TESK2Q96S53 571 aa17.43■□□□□ 0.38
TSC2-206ENST00000439117 RAB11FIP3O75154 756 aa17.43■□□□□ 0.38
TSC2-206ENST00000439117 CAMK4Q16566 473 aa17.43■□□□□ 0.38
TSC2-206ENST00000439117 PPP1R1BQ9UD71 204 aaPredicted RBP17.43■□□□□ 0.38
TSC2-206ENST00000439117 ASXL1Q8IXJ9 1541 aa17.43■□□□□ 0.38
TSC2-206ENST00000439117 CEP170Q5SW79 1584 aa17.43■□□□□ 0.38
TSC2-206ENST00000439117 FLIIQ13045 1269 aa17.43■□□□□ 0.38
TSC2-206ENST00000439117 KIAA1328Q86T90 577 aa17.43■□□□□ 0.38
TSC2-206ENST00000439117 CCDC171Q6TFL3 1326 aa17.43■□□□□ 0.38
TSC2-206ENST00000439117 CCDC83Q8IWF9 413 aa17.43■□□□□ 0.38
TSC2-206ENST00000439117 TRIM22Q8IYM9 498 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms