RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 MAP2P11137 1827 aaKnown RBP16.02■□□□□ 0.15
ACTN1-204ENST00000438964 KIF20AO95235 890 aa16.01■□□□□ 0.15
ACTN1-204ENST00000438964 RTF1Q92541 710 aaKnown RBP16.01■□□□□ 0.15
ACTN1-204ENST00000438964 PPFIA3O75145 1194 aa16.01■□□□□ 0.15
ACTN1-204ENST00000438964 FBXO31Q5XUX0 539 aaPredicted RBP16.01■□□□□ 0.15
ACTN1-204ENST00000438964 FUCA2Q9BTY2 467 aa16.01■□□□□ 0.15
ACTN1-204ENST00000438964 TRMT1Q9NXH9 659 aaKnown RBP16.01■□□□□ 0.15
ACTN1-204ENST00000438964 USP27XA6NNY8 438 aa16■□□□□ 0.15
ACTN1-204ENST00000438964 FOSBP53539 338 aa16■□□□□ 0.15
ACTN1-204ENST00000438964 TSPYL4Q9UJ04 414 aa16■□□□□ 0.15
ACTN1-204ENST00000438964 LMOD3Q0VAK6 560 aa16■□□□□ 0.15
ACTN1-204ENST00000438964 TPD52L1Q16890 204 aaPredicted RBP16■□□□□ 0.15
ACTN1-204ENST00000438964 ANO6Q4KMQ2 910 aa16■□□□□ 0.15
ACTN1-204ENST00000438964 CEBPZQ03701 1054 aaKnown RBP15.99■□□□□ 0.15
ACTN1-204ENST00000438964 CHD1O14646 1710 aa15.99■□□□□ 0.15
ACTN1-204ENST00000438964 KCNJ4P48050 445 aa15.99■□□□□ 0.15
ACTN1-204ENST00000438964 STK3Q13188 491 aa15.99■□□□□ 0.15
ACTN1-204ENST00000438964 HSP90AB2PQ58FF8 381 aa15.99■□□□□ 0.15
ACTN1-204ENST00000438964 TTC6Q86TZ1 520 aa15.99■□□□□ 0.15
ACTN1-204ENST00000438964 OSBPL3Q9H4L5 887 aa15.99■□□□□ 0.15
ACTN1-204ENST00000438964 DLG5Q8TDM6 1919 aa15.99■□□□□ 0.15
ACTN1-204ENST00000438964 SURF6O75683 361 aaKnown RBP15.98■□□□□ 0.15
ACTN1-204ENST00000438964 CCDC192P0DO97 292 aa15.98■□□□□ 0.15
ACTN1-204ENST00000438964 HSPA4P34932 840 aa15.98■□□□□ 0.15
ACTN1-204ENST00000438964 COG3Q96JB2 828 aa15.98■□□□□ 0.15
ACTN1-204ENST00000438964 JAKMIP1Q96N16 626 aaKnown RBP15.98■□□□□ 0.15
ACTN1-204ENST00000438964 CCDC144BQ3MJ40 725 aa15.98■□□□□ 0.15
ACTN1-204ENST00000438964 PRPF40BQ6NWY9 871 aaKnown RBP15.98■□□□□ 0.15
ACTN1-204ENST00000438964 CCDC144CPQ8IYA2 1237 aa15.98■□□□□ 0.15
ACTN1-204ENST00000438964 ERCC4Q92889 916 aaPredicted RBP15.98■□□□□ 0.15
ACTN1-204ENST00000438964 TMEM51Q9NW97 253 aa15.98■□□□□ 0.15
ACTN1-204ENST00000438964 DACT1Q9NYF0 836 aa15.98■□□□□ 0.15
ACTN1-204ENST00000438964 CTNNA3Q9UI47 895 aa15.98■□□□□ 0.15
ACTN1-204ENST00000438964 CHL1O00533 1208 aa15.97■□□□□ 0.15
ACTN1-204ENST00000438964 TYRO3Q06418 890 aa15.97■□□□□ 0.15
ACTN1-204ENST00000438964 CDC37L1Q7L3B6 337 aa15.97■□□□□ 0.15
ACTN1-204ENST00000438964 DNAJC25Q9H1X3 360 aa15.97■□□□□ 0.15
ACTN1-204ENST00000438964 MTMR6Q9Y217 621 aa15.97■□□□□ 0.15
ACTN1-204ENST00000438964 MRVI1Q9Y6F6 885 aa15.97■□□□□ 0.15
ACTN1-204ENST00000438964 EIF4A2Q14240 407 aaKnown RBP15.97■□□□□ 0.15
ACTN1-204ENST00000438964 LIMCH1Q9UPQ0 1083 aa15.97■□□□□ 0.15
ACTN1-204ENST00000438964 RPGRIP1LQ68CZ1 1315 aa15.97■□□□□ 0.15
ACTN1-204ENST00000438964 CTIFO43310 598 aaKnown RBP15.97■□□□□ 0.15
ACTN1-204ENST00000438964 PTH1RQ03431 593 aa15.97■□□□□ 0.15
ACTN1-204ENST00000438964 CACTINQ8WUQ7 758 aaKnown RBP15.97■□□□□ 0.15
ACTN1-204ENST00000438964 CBX8Q9HC52 389 aa15.97■□□□□ 0.15
ACTN1-204ENST00000438964 SALL3Q9BXA9 1300 aa15.96■□□□□ 0.15
ACTN1-204ENST00000438964 GOLGA6L6A8MZA4 724 aa15.96■□□□□ 0.15
ACTN1-204ENST00000438964 CCDC112Q8NEF3 446 aa15.96■□□□□ 0.15
ACTN1-204ENST00000438964 DDX11Q96FC9 970 aa15.96■□□□□ 0.15
ACTN1-204ENST00000438964 PUS7Q96PZ0 661 aaKnown RBP15.96■□□□□ 0.15
ACTN1-204ENST00000438964 ANAPC15P60006 121 aa15.95■□□□□ 0.14
ACTN1-204ENST00000438964 NUP62CLQ9H1M0 184 aa15.95■□□□□ 0.14
ACTN1-204ENST00000438964 ZSCAN25Q6NSZ9 544 aa15.95■□□□□ 0.14
ACTN1-204ENST00000438964 FILIP1Q7Z7B0 1213 aa15.95■□□□□ 0.14
ACTN1-204ENST00000438964 OGFRQ9NZT2 677 aa15.95■□□□□ 0.14
ACTN1-204ENST00000438964 MAP3K11Q16584 847 aa15.94■□□□□ 0.14
ACTN1-204ENST00000438964 TXNDC2Q86VQ3 553 aa15.94■□□□□ 0.14
ACTN1-204ENST00000438964 TNMDQ9H2S6 317 aa15.94■□□□□ 0.14
ACTN1-204ENST00000438964 ZNF215Q9UL58 517 aaPredicted RBP15.94■□□□□ 0.14
ACTN1-204ENST00000438964 GOLGA6L4A6NEF3 574 aa15.94■□□□□ 0.14
ACTN1-204ENST00000438964 ST3GAL1Q11201 340 aa15.94■□□□□ 0.14
ACTN1-204ENST00000438964 ME3Q16798 604 aa15.94■□□□□ 0.14
ACTN1-204ENST00000438964 FAM200AQ8TCP9 573 aa15.94■□□□□ 0.14
ACTN1-204ENST00000438964 TTC14Q96N46 770 aa15.94■□□□□ 0.14
ACTN1-204ENST00000438964 ZFYVE9O95405 1425 aa15.94■□□□□ 0.14
ACTN1-204ENST00000438964 LARP1BQ659C4 914 aaKnown RBP15.94■□□□□ 0.14
ACTN1-204ENST00000438964 TMEM87AQ8NBN3 555 aa15.94■□□□□ 0.14
ACTN1-204ENST00000438964 CLIP2Q9UDT6 1046 aa15.94■□□□□ 0.14
ACTN1-204ENST00000438964 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.94■□□□□ 0.14
ACTN1-204ENST00000438964 SLFN14P0C7P3 912 aa15.93■□□□□ 0.14
ACTN1-204ENST00000438964 FLIIQ13045 1269 aa15.93■□□□□ 0.14
ACTN1-204ENST00000438964 ELF2Q15723 593 aa15.93■□□□□ 0.14
ACTN1-204ENST00000438964 PTPRCP08575 1304 aa15.93■□□□□ 0.14
ACTN1-204ENST00000438964 POGZQ7Z3K3 1410 aa15.93■□□□□ 0.14
ACTN1-204ENST00000438964 PTPRMP28827 1452 aa15.93■□□□□ 0.14
ACTN1-204ENST00000438964 KMT5BQ4FZB7 885 aa15.93■□□□□ 0.14
ACTN1-204ENST00000438964 STK31Q9BXU1 1019 aa15.93■□□□□ 0.14
ACTN1-204ENST00000438964 PDRG1Q9NUG6 133 aa15.93■□□□□ 0.14
ACTN1-204ENST00000438964 REREQ9P2R6 1566 aa15.93■□□□□ 0.14
ACTN1-204ENST00000438964 ANXA1P04083 346 aa15.92■□□□□ 0.14
ACTN1-204ENST00000438964 HYPKQ9NX55 129 aa15.92■□□□□ 0.14
ACTN1-204ENST00000438964 USP16Q9Y5T5 823 aa15.92■□□□□ 0.14
ACTN1-204ENST00000438964 SGSM2O43147 1006 aa15.92■□□□□ 0.14
ACTN1-204ENST00000438964 PPP1R42Q7Z4L9 355 aa15.92■□□□□ 0.14
ACTN1-204ENST00000438964 LSG1Q9H089 658 aaKnown RBP15.92■□□□□ 0.14
ACTN1-204ENST00000438964 PHAXQ9H814 394 aaKnown RBP15.92■□□□□ 0.14
ACTN1-204ENST00000438964 TAOK2Q9UL54 1235 aa15.92■□□□□ 0.14
ACTN1-204ENST00000438964 TAF6LQ9Y6J9 622 aa15.92■□□□□ 0.14
ACTN1-204ENST00000438964 RAD50Q92878 1312 aa15.92■□□□□ 0.14
ACTN1-204ENST00000438964 YEATS2Q9ULM3 1422 aa15.92■□□□□ 0.14
ACTN1-204ENST00000438964 NR1I2O75469 434 aa15.92■□□□□ 0.14
ACTN1-204ENST00000438964 CDK11BP21127 795 aaKnown RBP15.92■□□□□ 0.14
ACTN1-204ENST00000438964 CCT4P50991 539 aaKnown RBP15.92■□□□□ 0.14
ACTN1-204ENST00000438964 BICD2Q8TD16 824 aa15.92■□□□□ 0.14
ACTN1-204ENST00000438964 ATP8B2P98198 1209 aa15.91■□□□□ 0.14
ACTN1-204ENST00000438964 OS9Q13438 667 aaPredicted RBP15.91■□□□□ 0.14
ACTN1-204ENST00000438964 KIF18AQ8NI77 898 aa15.91■□□□□ 0.14
ACTN1-204ENST00000438964 GTF3C6Q969F1 213 aa15.91■□□□□ 0.14
ACTN1-204ENST00000438964 EIF2S2P20042 333 aaKnown RBP15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms