RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 FLIIQ13045 1269 aa6.67□□□□□ -1.34
HMGB1P18-201ENST00000438801 NBPF1Q3BBV0 1214 aa6.67□□□□□ -1.34
HMGB1P18-201ENST00000438801 ARSJQ5FYB0 599 aaPredicted RBP6.67□□□□□ -1.34
HMGB1P18-201ENST00000438801 GOLGA6L1Q8N7Z2 621 aa6.67□□□□□ -1.34
HMGB1P18-201ENST00000438801 EDARADDQ8WWZ3 215 aa6.67□□□□□ -1.34
HMGB1P18-201ENST00000438801 DNAAF2Q9NVR5 837 aaKnown RBP6.67□□□□□ -1.34
HMGB1P18-201ENST00000438801 CABP1Q9NZU7 370 aa6.67□□□□□ -1.34
HMGB1P18-201ENST00000438801 PCDHGC4Q9Y5F7 938 aa6.67□□□□□ -1.34
HMGB1P18-201ENST00000438801 USP3Q9Y6I4 520 aa6.67□□□□□ -1.34
HMGB1P18-201ENST00000438801 SHISA8B8ZZ34 492 aa6.66□□□□□ -1.34
HMGB1P18-201ENST00000438801 UBTFP17480 764 aaKnown RBP6.66□□□□□ -1.34
HMGB1P18-201ENST00000438801 TATP17735 454 aaPredicted RBP6.66□□□□□ -1.34
HMGB1P18-201ENST00000438801 PSME1Q06323 249 aa6.66□□□□□ -1.34
HMGB1P18-201ENST00000438801 SUZ12Q15022 739 aaKnown RBP6.66□□□□□ -1.34
HMGB1P18-201ENST00000438801 DCAF5Q96JK2 942 aa6.66□□□□□ -1.34
HMGB1P18-201ENST00000438801 A0A1W2PNR3 127 aa6.65□□□□□ -1.34
HMGB1P18-201ENST00000438801 USP17L5A8MUK1 530 aa6.65□□□□□ -1.34
HMGB1P18-201ENST00000438801 ATXN7O15265 892 aaPredicted RBP6.65□□□□□ -1.34
HMGB1P18-201ENST00000438801 SNRPNP63162 240 aaKnown RBP6.65□□□□□ -1.34
HMGB1P18-201ENST00000438801 DEPDC4Q8N2C3 294 aa6.65□□□□□ -1.34
HMGB1P18-201ENST00000438801 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.65□□□□□ -1.34
HMGB1P18-201ENST00000438801 ZNF358Q9NW07 568 aa6.65□□□□□ -1.34
HMGB1P18-201ENST00000438801 ZDHHC3Q9NYG2 299 aa6.65□□□□□ -1.34
HMGB1P18-201ENST00000438801 GGA1Q9UJY5 639 aa6.65□□□□□ -1.34
HMGB1P18-201ENST00000438801 POM121CA8CG34 1229 aa6.64□□□□□ -1.35
HMGB1P18-201ENST00000438801 MAPTP10636 758 aaKnown RBP6.64□□□□□ -1.35
HMGB1P18-201ENST00000438801 PLA2G4EQ3MJ16 856 aa6.64□□□□□ -1.35
HMGB1P18-201ENST00000438801 SLCO4C1Q6ZQN7 724 aa6.64□□□□□ -1.35
HMGB1P18-201ENST00000438801 RRAGCQ9HB90 399 aa6.64□□□□□ -1.35
HMGB1P18-201ENST00000438801 MKL2Q9ULH7 1088 aa6.64□□□□□ -1.35
HMGB1P18-201ENST00000438801 PARP3Q9Y6F1 533 aa6.64□□□□□ -1.35
HMGB1P18-201ENST00000438801 DCDC2BA2VCK2 349 aa6.63□□□□□ -1.35
HMGB1P18-201ENST00000438801 ARAFP10398 606 aa6.63□□□□□ -1.35
HMGB1P18-201ENST00000438801 TNP2Q05952 138 aa6.63□□□□□ -1.35
HMGB1P18-201ENST00000438801 ADAMTS19Q8TE59 1207 aa6.63□□□□□ -1.35
HMGB1P18-201ENST00000438801 ZIC5Q96T25 663 aa6.63□□□□□ -1.35
HMGB1P18-201ENST00000438801 SCHIP1Q9P0W5 487 aaPredicted RBP6.63□□□□□ -1.35
HMGB1P18-201ENST00000438801 GJA3Q9Y6H8 435 aa6.63□□□□□ -1.35
HMGB1P18-201ENST00000438801 NEURL1BA8MQ27 555 aa6.62□□□□□ -1.35
HMGB1P18-201ENST00000438801 KHNYNO15037 678 aaKnown RBP6.62□□□□□ -1.35
HMGB1P18-201ENST00000438801 EPXP11678 715 aa6.62□□□□□ -1.35
HMGB1P18-201ENST00000438801 AMPD1P23109 780 aa6.62□□□□□ -1.35
HMGB1P18-201ENST00000438801 FAM182BQ5T319 152 aa6.62□□□□□ -1.35
HMGB1P18-201ENST00000438801 BICDL1Q6ZP65 573 aa6.62□□□□□ -1.35
HMGB1P18-201ENST00000438801 TRIM50Q86XT4 487 aa6.62□□□□□ -1.35
HMGB1P18-201ENST00000438801 ZDHHC1Q8WTX9 485 aa6.62□□□□□ -1.35
HMGB1P18-201ENST00000438801 HCN2Q9UL51 889 aa6.62□□□□□ -1.35
HMGB1P18-201ENST00000438801 MSTNO14793 375 aa6.61□□□□□ -1.35
HMGB1P18-201ENST00000438801 ITGB2P05107 769 aa6.61□□□□□ -1.35
HMGB1P18-201ENST00000438801 FAM157BP0CG42 384 aa6.61□□□□□ -1.35
HMGB1P18-201ENST00000438801 CD33P20138 364 aa6.61□□□□□ -1.35
HMGB1P18-201ENST00000438801 TXLNAP40222 546 aa6.61□□□□□ -1.35
HMGB1P18-201ENST00000438801 EPHA4P54764 986 aa6.61□□□□□ -1.35
HMGB1P18-201ENST00000438801 HDGFL1Q5TGJ6 251 aa6.61□□□□□ -1.35
HMGB1P18-201ENST00000438801 PLEKHM2Q8IWE5 1019 aa6.61□□□□□ -1.35
HMGB1P18-201ENST00000438801 L3MBTL2Q969R5 705 aa6.61□□□□□ -1.35
HMGB1P18-201ENST00000438801 BTBD6Q96KE9 485 aa6.61□□□□□ -1.35
HMGB1P18-201ENST00000438801 UCN2Q96RP3 112 aa6.61□□□□□ -1.35
HMGB1P18-201ENST00000438801 LOC100996750A0A140TA64 210 aa6.6□□□□□ -1.35
HMGB1P18-201ENST00000438801 USP17L3A6NCW0 530 aa6.6□□□□□ -1.35
HMGB1P18-201ENST00000438801 USP17L4A6NCW7 530 aa6.6□□□□□ -1.35
HMGB1P18-201ENST00000438801 ZBTB7BO15156 539 aaPredicted RBP6.6□□□□□ -1.35
HMGB1P18-201ENST00000438801 HOXB4P17483 251 aaPredicted RBP6.6□□□□□ -1.35
HMGB1P18-201ENST00000438801 NOS2P35228 1153 aa6.6□□□□□ -1.35
HMGB1P18-201ENST00000438801 ATP1A2P50993 1020 aa6.6□□□□□ -1.35
HMGB1P18-201ENST00000438801 TEAD4Q15561 434 aa6.6□□□□□ -1.35
HMGB1P18-201ENST00000438801 TBCELQ5QJ74 424 aa6.6□□□□□ -1.35
HMGB1P18-201ENST00000438801 SAMD5Q5TGI4 173 aa6.6□□□□□ -1.35
HMGB1P18-201ENST00000438801 USP17L2Q6R6M4 530 aa6.6□□□□□ -1.35
HMGB1P18-201ENST00000438801 USP17L1Q7RTZ2 530 aa6.6□□□□□ -1.35
HMGB1P18-201ENST00000438801 SLC9A9Q8IVB4 645 aa6.6□□□□□ -1.35
HMGB1P18-201ENST00000438801 TNS4Q8IZW8 715 aa6.6□□□□□ -1.35
HMGB1P18-201ENST00000438801 KRTAP4-6Q9BYQ5 205 aa6.6□□□□□ -1.35
HMGB1P18-201ENST00000438801 KIAA1024Q9UPX6 916 aa6.6□□□□□ -1.35
HMGB1P18-201ENST00000438801 ATP9BO43861 1147 aa6.59□□□□□ -1.35
HMGB1P18-201ENST00000438801 ADH6P28332 368 aa6.59□□□□□ -1.35
HMGB1P18-201ENST00000438801 CLDN10P78369 228 aa6.59□□□□□ -1.35
HMGB1P18-201ENST00000438801 CCDC102BQ68D86 513 aa6.59□□□□□ -1.35
HMGB1P18-201ENST00000438801 LINC00114Q6XXX2 140 aa6.59□□□□□ -1.35
HMGB1P18-201ENST00000438801 TPCN2Q8NHX9 752 aa6.59□□□□□ -1.35
HMGB1P18-201ENST00000438801 SPOCK3Q9BQ16 436 aa6.59□□□□□ -1.35
HMGB1P18-201ENST00000438801 AVENQ9NQS1 362 aaPredicted RBP6.59□□□□□ -1.35
HMGB1P18-201ENST00000438801 KLF15Q9UIH9 416 aa6.59□□□□□ -1.35
HMGB1P18-201ENST00000438801 KRBA1A5PL33 1030 aa6.58□□□□□ -1.36
HMGB1P18-201ENST00000438801 EML1O00423 815 aa6.58□□□□□ -1.36
HMGB1P18-201ENST00000438801 COL8A1P27658 744 aa6.58□□□□□ -1.36
HMGB1P18-201ENST00000438801 LAMC2Q13753 1193 aa6.58□□□□□ -1.36
HMGB1P18-201ENST00000438801 ALYREFQ86V81 257 aaKnown RBP6.58□□□□□ -1.36
HMGB1P18-201ENST00000438801 MARK1Q9P0L2 795 aa6.58□□□□□ -1.36
HMGB1P18-201ENST00000438801 PRR12Q9ULL5 1215 aa6.58□□□□□ -1.36
HMGB1P18-201ENST00000438801 ZNF232Q9UNY5 417 aa6.58□□□□□ -1.36
HMGB1P18-201ENST00000438801 SERTM1A2A2V5 107 aa6.57□□□□□ -1.36
HMGB1P18-201ENST00000438801 PIK3R2O00459 728 aa6.57□□□□□ -1.36
HMGB1P18-201ENST00000438801 EFSO43281 561 aa6.57□□□□□ -1.36
HMGB1P18-201ENST00000438801 PCBP4P57723 403 aaKnown RBP6.57□□□□□ -1.36
HMGB1P18-201ENST00000438801 SH3PXD2AQ5TCZ1 1133 aa6.57□□□□□ -1.36
HMGB1P18-201ENST00000438801 FCHSD1Q86WN1 690 aa6.57□□□□□ -1.36
HMGB1P18-201ENST00000438801 LARGE2Q8N3Y3 721 aa6.57□□□□□ -1.36
HMGB1P18-201ENST00000438801 OGFOD1Q8N543 542 aa6.57□□□□□ -1.36
HMGB1P18-201ENST00000438801 SUV39H2Q9H5I1 410 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms