RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 MNS1Q8NEH6 495 aa7.91□□□□□ -1.14
CSDE1-205ENST00000438362 ABCC4O15439 1325 aa7.91□□□□□ -1.14
CSDE1-205ENST00000438362 IQGAP3Q86VI3 1631 aa7.91□□□□□ -1.14
CSDE1-205ENST00000438362 POLR1AO95602 1720 aaPredicted RBP7.91□□□□□ -1.14
CSDE1-205ENST00000438362 CHL1O00533 1208 aa7.91□□□□□ -1.14
CSDE1-205ENST00000438362 DYNC1I1O14576 645 aa7.91□□□□□ -1.14
CSDE1-205ENST00000438362 SMC2O95347 1197 aa7.91□□□□□ -1.14
CSDE1-205ENST00000438362 TPM1P09493 284 aa7.91□□□□□ -1.14
CSDE1-205ENST00000438362 TATP17735 454 aaPredicted RBP7.91□□□□□ -1.14
CSDE1-205ENST00000438362 CHMLP26374 656 aa7.91□□□□□ -1.14
CSDE1-205ENST00000438362 ZNF445P59923 1031 aa7.91□□□□□ -1.14
CSDE1-205ENST00000438362 SAFBQ15424 915 aaKnown RBP eCLIP7.91□□□□□ -1.14
CSDE1-205ENST00000438362 MTHFSDQ2M296 383 aaKnown RBP7.91□□□□□ -1.14
CSDE1-205ENST00000438362 EVI5LQ96CN4 794 aa7.91□□□□□ -1.14
CSDE1-205ENST00000438362 CCDC8Q9H0W5 538 aaPredicted RBP7.91□□□□□ -1.14
CSDE1-205ENST00000438362 CROCC2H7BZ55 1655 aa7.91□□□□□ -1.14
CSDE1-205ENST00000438362 MSH6P52701 1360 aa7.9□□□□□ -1.14
CSDE1-205ENST00000438362 KCNH5Q8NCM2 988 aa7.9□□□□□ -1.14
CSDE1-205ENST00000438362 DDX11Q96FC9 970 aa7.9□□□□□ -1.14
CSDE1-205ENST00000438362 ARGLU1Q9NWB6 273 aaPredicted RBP7.9□□□□□ -1.14
CSDE1-205ENST00000438362 RBSNQ9H1K0 784 aa7.9□□□□□ -1.14
CSDE1-205ENST00000438362 TTC21AQ8NDW8 1320 aa7.9□□□□□ -1.14
CSDE1-205ENST00000438362 UGGT1Q9NYU2 1555 aa7.9□□□□□ -1.14
CSDE1-205ENST00000438362 LARP1Q6PKG0 1096 aaKnown RBP7.9□□□□□ -1.15
CSDE1-205ENST00000438362 OLFM4Q6UX06 510 aa7.9□□□□□ -1.15
CSDE1-205ENST00000438362 CEP57L1Q8IYX8 460 aa7.9□□□□□ -1.15
CSDE1-205ENST00000438362 NCKAP5LQ9HCH0 1330 aa7.9□□□□□ -1.15
CSDE1-205ENST00000438362 FOXO3O43524 673 aa7.89□□□□□ -1.15
CSDE1-205ENST00000438362 GSPT1P15170 499 aaKnown RBP7.89□□□□□ -1.15
CSDE1-205ENST00000438362 FILIP1Q7Z7B0 1213 aa7.89□□□□□ -1.15
CSDE1-205ENST00000438362 PDCL2Q8N4E4 241 aa7.89□□□□□ -1.15
CSDE1-205ENST00000438362 CNPY2Q9Y2B0 182 aa7.89□□□□□ -1.15
CSDE1-205ENST00000438362 EDC4Q6P2E9 1401 aaKnown RBP7.89□□□□□ -1.15
CSDE1-205ENST00000438362 AMOTQ4VCS5 1084 aa7.89□□□□□ -1.15
CSDE1-205ENST00000438362 GIMAP6Q6P9H5 292 aa7.89□□□□□ -1.15
CSDE1-205ENST00000438362 MPRIPQ6WCQ1 1025 aa7.89□□□□□ -1.15
CSDE1-205ENST00000438362 G2E3Q7L622 706 aa7.89□□□□□ -1.15
CSDE1-205ENST00000438362 CKAP2LQ8IYA6 745 aa7.89□□□□□ -1.15
CSDE1-205ENST00000438362 GOLGA6L1Q8N7Z2 621 aa7.89□□□□□ -1.15
CSDE1-205ENST00000438362 DDX19AQ9NUU7 478 aaKnown RBP7.89□□□□□ -1.15
CSDE1-205ENST00000438362 LMBRD1Q9NUN5 540 aa7.89□□□□□ -1.15
CSDE1-205ENST00000438362 TFIP11Q9UBB9 837 aaKnown RBP7.89□□□□□ -1.15
CSDE1-205ENST00000438362 UHRF1BP1LA0JNW5 1464 aa7.89□□□□□ -1.15
CSDE1-205ENST00000438362 KIF24Q5T7B8 1368 aa7.89□□□□□ -1.15
CSDE1-205ENST00000438362 UNC13BO14795 1591 aa7.89□□□□□ -1.15
CSDE1-205ENST00000438362 PES1O00541 588 aaKnown RBP7.89□□□□□ -1.15
CSDE1-205ENST00000438362 ANXA1P04083 346 aa7.89□□□□□ -1.15
CSDE1-205ENST00000438362 BRPF1P55201 1214 aaPredicted RBP7.89□□□□□ -1.15
CSDE1-205ENST00000438362 GPS2Q13227 327 aa7.89□□□□□ -1.15
CSDE1-205ENST00000438362 TEX35Q5T0J7 233 aa7.89□□□□□ -1.15
CSDE1-205ENST00000438362 PRIMPOLQ96LW4 560 aa7.89□□□□□ -1.15
CSDE1-205ENST00000438362 TNNT3P45378 269 aaPredicted RBP7.88□□□□□ -1.15
CSDE1-205ENST00000438362 DHX8Q14562 1220 aaKnown RBP7.88□□□□□ -1.15
CSDE1-205ENST00000438362 TSR1Q2NL82 804 aaKnown RBP7.88□□□□□ -1.15
CSDE1-205ENST00000438362 CCDC158Q5M9N0 1113 aa7.88□□□□□ -1.15
CSDE1-205ENST00000438362 GAS2L3Q86XJ1 694 aa7.88□□□□□ -1.15
CSDE1-205ENST00000438362 JMYQ8N9B5 988 aa7.88□□□□□ -1.15
CSDE1-205ENST00000438362 ERICH2A1L162 156 aa7.88□□□□□ -1.15
CSDE1-205ENST00000438362 F13A1P00488 732 aa7.88□□□□□ -1.15
CSDE1-205ENST00000438362 EVA1CP58658 441 aa7.88□□□□□ -1.15
CSDE1-205ENST00000438362 HYPKQ9NX55 129 aa7.88□□□□□ -1.15
CSDE1-205ENST00000438362 NOL7Q9UMY1 257 aaKnown RBP7.88□□□□□ -1.15
CSDE1-205ENST00000438362 MAP3K2Q9Y2U5 619 aa7.88□□□□□ -1.15
CSDE1-205ENST00000438362 SOS1Q07889 1333 aaPredicted RBP7.88□□□□□ -1.15
CSDE1-205ENST00000438362 FLT4P35916 1363 aa7.88□□□□□ -1.15
CSDE1-205ENST00000438362 PHF8Q9UPP1 1060 aa7.88□□□□□ -1.15
CSDE1-205ENST00000438362 CCP110O43303 1012 aa7.87□□□□□ -1.15
CSDE1-205ENST00000438362 ATF3P18847 181 aa7.87□□□□□ -1.15
CSDE1-205ENST00000438362 NOLC1Q14978 699 aaKnown RBP eCLIP7.87□□□□□ -1.152e-7■□□□□ 10.8
CSDE1-205ENST00000438362 ZNF830Q96NB3 372 aaPredicted RBP7.87□□□□□ -1.15
CSDE1-205ENST00000438362 AK2P54819 239 aa7.87□□□□□ -1.15
CSDE1-205ENST00000438362 NECAB1Q8N987 351 aa7.87□□□□□ -1.15
CSDE1-205ENST00000438362 ANKRD20A12PQ8NF67 263 aa7.87□□□□□ -1.15
CSDE1-205ENST00000438362 EYA1Q99502 592 aa7.87□□□□□ -1.15
CSDE1-205ENST00000438362 CHPF2Q9P2E5 772 aa7.87□□□□□ -1.15
CSDE1-205ENST00000438362 CTNNA3Q9UI47 895 aa7.87□□□□□ -1.15
CSDE1-205ENST00000438362 CABP4P57796 275 aa7.87□□□□□ -1.15
CSDE1-205ENST00000438362 PDILTQ8N807 584 aa7.87□□□□□ -1.15
CSDE1-205ENST00000438362 TTC12Q9H892 705 aaPredicted RBP7.87□□□□□ -1.15
CSDE1-205ENST00000438362 CEP126Q9P2H0 1117 aa7.87□□□□□ -1.15
CSDE1-205ENST00000438362 MAP3K19Q56UN5 1328 aa7.87□□□□□ -1.15
CSDE1-205ENST00000438362 CLASP1Q7Z460 1538 aa7.87□□□□□ -1.15
CSDE1-205ENST00000438362 ZNF165P49910 485 aa7.86□□□□□ -1.15
CSDE1-205ENST00000438362 DNM1Q05193 864 aaKnown RBP7.86□□□□□ -1.15
CSDE1-205ENST00000438362 TTC39AQ5SRH9 613 aa7.86□□□□□ -1.15
CSDE1-205ENST00000438362 TBC1D2BQ9UPU7 963 aa7.86□□□□□ -1.15
CSDE1-205ENST00000438362 RBM8AQ9Y5S9 174 aaKnown RBP7.86□□□□□ -1.15
CSDE1-205ENST00000438362 U3KPZ7 1027 aaPredicted RBP7.86□□□□□ -1.15
CSDE1-205ENST00000438362 TNRQ92752 1358 aa7.86□□□□□ -1.15
CSDE1-205ENST00000438362 CD2BP2O95400 341 aaKnown RBP7.86□□□□□ -1.15
CSDE1-205ENST00000438362 SERPINC1P01008 464 aa7.86□□□□□ -1.15
CSDE1-205ENST00000438362 GTF2E1P29083 439 aaPredicted RBP7.86□□□□□ -1.15
CSDE1-205ENST00000438362 FKBP4Q02790 459 aaKnown RBP eCLIP7.86□□□□□ -1.15
CSDE1-205ENST00000438362 MYD88Q99836 296 aa7.86□□□□□ -1.15
CSDE1-205ENST00000438362 ANO10Q9NW15 660 aa7.86□□□□□ -1.15
CSDE1-205ENST00000438362 HMG20BQ9P0W2 317 aa7.86□□□□□ -1.15
CSDE1-205ENST00000438362 CLIP2Q9UDT6 1046 aa7.86□□□□□ -1.15
CSDE1-205ENST00000438362 KIAA0232Q92628 1395 aa7.86□□□□□ -1.15
CSDE1-205ENST00000438362 TTC41PQ6P2S7 1318 aa7.86□□□□□ -1.15
CSDE1-205ENST00000438362 CTAGE5O15320 804 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms