RNA–Protein interactions for RNA: ENST00000437811.1

HLA-DPA1-243, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-243ENST00000437811 CHMP4BQ9H444 224 aaKnown RBP17.21■□□□□ 0.35
HLA-DPA1-243ENST00000437811 TMOD3Q9NYL9 352 aa17.21■□□□□ 0.35
HLA-DPA1-243ENST00000437811 CHPF2Q9P2E5 772 aa17.21■□□□□ 0.35
HLA-DPA1-243ENST00000437811 THSD7AQ9UPZ6 1657 aa17.21■□□□□ 0.35
HLA-DPA1-243ENST00000437811 SNRPA1P09661 255 aaKnown RBP17.2■□□□□ 0.34
HLA-DPA1-243ENST00000437811 CENPQQ7L2Z9 268 aaPredicted RBP17.2■□□□□ 0.34
HLA-DPA1-243ENST00000437811 ZBTB40Q9NUA8 1239 aa17.2■□□□□ 0.34
HLA-DPA1-243ENST00000437811 DBF4Q9UBU7 674 aaPredicted RBP17.2■□□□□ 0.34
HLA-DPA1-243ENST00000437811 FKBP5Q13451 457 aaPredicted RBP17.19■□□□□ 0.34
HLA-DPA1-243ENST00000437811 PCDHB15Q9Y5E8 787 aa17.19■□□□□ 0.34
HLA-DPA1-243ENST00000437811 BCL9O00512 1426 aa17.19■□□□□ 0.34
HLA-DPA1-243ENST00000437811 AFF2P51816 1311 aa17.19■□□□□ 0.34
HLA-DPA1-243ENST00000437811 ZBTB7BO15156 539 aaPredicted RBP17.18■□□□□ 0.34
HLA-DPA1-243ENST00000437811 PHAXQ9H814 394 aaKnown RBP17.18■□□□□ 0.34
HLA-DPA1-243ENST00000437811 ATRNO75882 1429 aa17.17■□□□□ 0.34
HLA-DPA1-243ENST00000437811 FAM98CQ17RN3 349 aaKnown RBP17.17■□□□□ 0.34
HLA-DPA1-243ENST00000437811 MARCH10Q8NA82 808 aaPredicted RBP17.17■□□□□ 0.34
HLA-DPA1-243ENST00000437811 PIGBQ92521 554 aa17.17■□□□□ 0.34
HLA-DPA1-243ENST00000437811 F6X3S4 739 aa17.16■□□□□ 0.34
HLA-DPA1-243ENST00000437811 CCT4P50991 539 aaKnown RBP17.16■□□□□ 0.34
HLA-DPA1-243ENST00000437811 PROSER3Q2NL68 480 aa17.16■□□□□ 0.34
HLA-DPA1-243ENST00000437811 DDX21Q9NR30 783 aaKnown RBP eCLIP17.16■□□□□ 0.34
HLA-DPA1-243ENST00000437811 ANXA1P04083 346 aa17.15■□□□□ 0.34
HLA-DPA1-243ENST00000437811 PDIA6Q15084 440 aa17.15■□□□□ 0.34
HLA-DPA1-243ENST00000437811 HYPKQ9NX55 129 aa17.15■□□□□ 0.34
HLA-DPA1-243ENST00000437811 IGHDP01880 384 aa17.15■□□□□ 0.34
HLA-DPA1-243ENST00000437811 USP16Q9Y5T5 823 aa17.15■□□□□ 0.34
HLA-DPA1-243ENST00000437811 ERBB4Q15303 1308 aa17.14■□□□□ 0.33
HLA-DPA1-243ENST00000437811 SLC4A10Q6U841 1118 aa17.14■□□□□ 0.33
HLA-DPA1-243ENST00000437811 ATG3Q9NT62 314 aa17.14■□□□□ 0.33
HLA-DPA1-243ENST00000437811 ADCY9O60503 1353 aa17.13■□□□□ 0.33
HLA-DPA1-243ENST00000437811 RWDD1Q9H446 243 aaPredicted RBP17.13■□□□□ 0.33
HLA-DPA1-243ENST00000437811 TRPC5Q9UL62 973 aaPredicted RBP17.13■□□□□ 0.33
HLA-DPA1-243ENST00000437811 ASAP1Q9ULH1 1129 aa17.13■□□□□ 0.33
HLA-DPA1-243ENST00000437811 ATP10DQ9P241 1426 aa17.12■□□□□ 0.33
HLA-DPA1-243ENST00000437811 PTCD1O75127 700 aaKnown RBP17.12■□□□□ 0.33
HLA-DPA1-243ENST00000437811 PRIM1P49642 420 aaKnown RBP17.12■□□□□ 0.33
HLA-DPA1-243ENST00000437811 HDAC1Q13547 482 aaPredicted RBP17.12■□□□□ 0.33
HLA-DPA1-243ENST00000437811 VSIG10Q8N0Z9 540 aa17.12■□□□□ 0.33
HLA-DPA1-243ENST00000437811 GJD4Q96KN9 370 aaPredicted RBP17.12■□□□□ 0.33
HLA-DPA1-243ENST00000437811 LRP10Q7Z4F1 713 aa17.11■□□□□ 0.33
HLA-DPA1-243ENST00000437811 DNAAF4Q8WXU2 420 aa17.11■□□□□ 0.33
HLA-DPA1-243ENST00000437811 TJP1Q07157 1748 aa17.1■□□□□ 0.33
HLA-DPA1-243ENST00000437811 PI4KAP2A4QPH2 592 aa17.1■□□□□ 0.33
HLA-DPA1-243ENST00000437811 DDX58O95786 925 aaKnown RBP17.1■□□□□ 0.33
HLA-DPA1-243ENST00000437811 KSR2Q6VAB6 950 aa17.1■□□□□ 0.33
HLA-DPA1-243ENST00000437811 PI4KAP1Q8N8J0 262 aa17.1■□□□□ 0.33
HLA-DPA1-243ENST00000437811 SYTL4Q96C24 671 aaPredicted RBP17.1■□□□□ 0.33
HLA-DPA1-243ENST00000437811 MEIS3Q99687 375 aa17.1■□□□□ 0.33
HLA-DPA1-243ENST00000437811 CICQ96RK0 1608 aaPredicted RBP17.09■□□□□ 0.33
HLA-DPA1-243ENST00000437811 A0A0G2JS52 829 aa17.09■□□□□ 0.33
HLA-DPA1-243ENST00000437811 MYT1Q01538 1121 aa17.09■□□□□ 0.33
HLA-DPA1-243ENST00000437811 C1orf115Q9H7X2 142 aa17.09■□□□□ 0.33
HLA-DPA1-243ENST00000437811 MYL6BP14649 208 aa17.08■□□□□ 0.32
HLA-DPA1-243ENST00000437811 XAGE3Q8WTP9 111 aa17.08■□□□□ 0.32
HLA-DPA1-243ENST00000437811 ACSBG1Q96GR2 724 aa17.08■□□□□ 0.32
HLA-DPA1-243ENST00000437811 TEX13AQ9BXU3 409 aaPredicted RBP17.08■□□□□ 0.32
HLA-DPA1-243ENST00000437811 SRCIN1Q9C0H9 1055 aa17.08■□□□□ 0.32
HLA-DPA1-243ENST00000437811 ONECUT3O60422 494 aaPredicted RBP17.07■□□□□ 0.32
HLA-DPA1-243ENST00000437811 BEND3Q5T5X7 828 aa17.07■□□□□ 0.32
HLA-DPA1-243ENST00000437811 DNAJC10Q8IXB1 793 aa17.07■□□□□ 0.32
HLA-DPA1-243ENST00000437811 RBM42Q9BTD8 480 aaKnown RBP17.07■□□□□ 0.32
HLA-DPA1-243ENST00000437811 MAP3K2Q9Y2U5 619 aa17.07■□□□□ 0.32
HLA-DPA1-243ENST00000437811 NHSQ6T4R5 1651 aa17.07■□□□□ 0.32
HLA-DPA1-243ENST00000437811 ARFGEF2Q9Y6D5 1785 aa17.06■□□□□ 0.32
HLA-DPA1-243ENST00000437811 NBPF26B4DH59 902 aa17.06■□□□□ 0.32
HLA-DPA1-243ENST00000437811 GNAI3P08754 354 aa17.06■□□□□ 0.32
HLA-DPA1-243ENST00000437811 AIMP1Q12904 312 aaKnown RBP17.06■□□□□ 0.32
HLA-DPA1-243ENST00000437811 NBPF14Q5TI25 921 aa17.06■□□□□ 0.32
HLA-DPA1-243ENST00000437811 NBPF10Q6P3W6 841 aaKnown RBP17.06■□□□□ 0.32
HLA-DPA1-243ENST00000437811 COPS6Q7L5N1 327 aa17.06■□□□□ 0.32
HLA-DPA1-243ENST00000437811 NBPF15Q8N660 670 aa17.06■□□□□ 0.32
HLA-DPA1-243ENST00000437811 ALDH1L1O75891 902 aa17.05■□□□□ 0.32
HLA-DPA1-243ENST00000437811 PIP4K2AP48426 406 aaPredicted RBP17.05■□□□□ 0.32
HLA-DPA1-243ENST00000437811 KAT6BQ8WYB5 2073 aa17.05■□□□□ 0.32
HLA-DPA1-243ENST00000437811 NUP188Q5SRE5 1749 aa17.05■□□□□ 0.32
HLA-DPA1-243ENST00000437811 A1BGP04217 495 aa17.04■□□□□ 0.32
HLA-DPA1-243ENST00000437811 RPAP2Q8IXW5 612 aaPredicted RBP17.04■□□□□ 0.32
HLA-DPA1-243ENST00000437811 SMC5Q8IY18 1101 aa17.04■□□□□ 0.32
HLA-DPA1-243ENST00000437811 ANKRD44Q8N8A2 993 aa17.04■□□□□ 0.32
HLA-DPA1-243ENST00000437811 SLC4A9Q96Q91 983 aa17.04■□□□□ 0.32
HLA-DPA1-243ENST00000437811 QTRT2Q9H974 415 aaKnown RBP17.04■□□□□ 0.32
HLA-DPA1-243ENST00000437811 IBTKQ9P2D0 1353 aaPredicted RBP17.04■□□□□ 0.32
HLA-DPA1-243ENST00000437811 GNAI2P04899 355 aa17.03■□□□□ 0.32
HLA-DPA1-243ENST00000437811 RIC3Q7Z5B4 369 aa17.03■□□□□ 0.32
HLA-DPA1-243ENST00000437811 SIRT2Q8IXJ6 389 aa17.03■□□□□ 0.32
HLA-DPA1-243ENST00000437811 USP44Q9H0E7 712 aa17.03■□□□□ 0.32
HLA-DPA1-243ENST00000437811 ZNF831Q5JPB2 1677 aa17.03■□□□□ 0.32
HLA-DPA1-243ENST00000437811 STARD3NLO95772 234 aa17.02■□□□□ 0.32
HLA-DPA1-243ENST00000437811 CEP85Q6P2H3 762 aa17.02■□□□□ 0.32
HLA-DPA1-243ENST00000437811 ANKRD13DQ6ZTN6 518 aa17.02■□□□□ 0.32
HLA-DPA1-243ENST00000437811 SKAP1Q86WV1 359 aa17.02■□□□□ 0.32
HLA-DPA1-243ENST00000437811 SEPT12Q8IYM1 358 aa17.02■□□□□ 0.32
HLA-DPA1-243ENST00000437811 LINS1Q8NG48 757 aa17.02■□□□□ 0.32
HLA-DPA1-243ENST00000437811 PALLDQ8WX93 1383 aa17.02■□□□□ 0.32
HLA-DPA1-243ENST00000437811 SMARCC1Q92922 1105 aaPredicted RBP17.02■□□□□ 0.32
HLA-DPA1-243ENST00000437811 RREB1Q92766 1687 aa17.02■□□□□ 0.31
HLA-DPA1-243ENST00000437811 KCNQ2O43526 872 aa17.02■□□□□ 0.31
HLA-DPA1-243ENST00000437811 PLBD2Q8NHP8 589 aa17.02■□□□□ 0.31
HLA-DPA1-243ENST00000437811 METTL22Q9BUU2 404 aaPredicted RBP17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms