RNA–Protein interactions for RNA: ENST00000437737.3

LINC01088-201, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 5 BASIC

Gene LINC01088, Length 973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-201ENST00000437737 USPL1Q5W0Q7 1092 aa19.33■□□□□ 0.68
LINC01088-201ENST00000437737 DLEC1Q9Y238 1755 aa19.33■□□□□ 0.68
LINC01088-201ENST00000437737 SCN11AQ9UI33 1791 aa19.32■□□□□ 0.68
LINC01088-201ENST00000437737 GLTPD2A6NH11 291 aa19.32■□□□□ 0.68
LINC01088-201ENST00000437737 LMNB1P20700 586 aa19.32■□□□□ 0.68
LINC01088-201ENST00000437737 ZEB1P37275 1124 aaPredicted RBP19.31■□□□□ 0.68
LINC01088-201ENST00000437737 INTS5Q6P9B9 1019 aaKnown RBP19.31■□□□□ 0.68
LINC01088-201ENST00000437737 NRXN2Q9P2S2 1712 aa19.29■□□□□ 0.68
LINC01088-201ENST00000437737 AEBP1Q8IUX7 1158 aa19.29■□□□□ 0.68
LINC01088-201ENST00000437737 DNAJC10Q8IXB1 793 aa19.29■□□□□ 0.68
LINC01088-201ENST00000437737 PCNTO95613 3336 aa19.28■□□□□ 0.68
LINC01088-201ENST00000437737 SOS1Q07889 1333 aaPredicted RBP19.27■□□□□ 0.68
LINC01088-201ENST00000437737 NFIXQ14938 502 aa19.27■□□□□ 0.68
LINC01088-201ENST00000437737 TTLL6Q8N841 843 aa19.27■□□□□ 0.68
LINC01088-201ENST00000437737 VIRMAQ69YN4 1812 aaKnown RBP19.26■□□□□ 0.67
LINC01088-201ENST00000437737 C2CD5Q86YS7 1000 aa19.26■□□□□ 0.67
LINC01088-201ENST00000437737 NARFQ9UHQ1 456 aa19.26■□□□□ 0.67
LINC01088-201ENST00000437737 COL15A1P39059 1388 aa19.26■□□□□ 0.67
LINC01088-201ENST00000437737 SERPINB2P05120 415 aa19.25■□□□□ 0.67
LINC01088-201ENST00000437737 SULT6B1Q6IMI4 303 aa19.25■□□□□ 0.67
LINC01088-201ENST00000437737 DPY19L2Q6NUT2 758 aa19.24■□□□□ 0.67
LINC01088-201ENST00000437737 DICER1Q9UPY3 1922 aaKnown RBP19.23■□□□□ 0.67
LINC01088-201ENST00000437737 H0YIN7 160 aa19.23■□□□□ 0.67
LINC01088-201ENST00000437737 NFKBIEO00221 500 aa19.23■□□□□ 0.67
LINC01088-201ENST00000437737 CYP19A1P11511 503 aaPredicted RBP19.22■□□□□ 0.67
LINC01088-201ENST00000437737 SLC52A2Q9HAB3 445 aa19.22■□□□□ 0.67
LINC01088-201ENST00000437737 ZBTB1Q9Y2K1 713 aa19.22■□□□□ 0.67
LINC01088-201ENST00000437737 CARMIL3Q8ND23 1372 aa19.21■□□□□ 0.67
LINC01088-201ENST00000437737 POTECB2RU33 542 aa19.21■□□□□ 0.67
LINC01088-201ENST00000437737 SLC39A6Q13433 755 aa19.21■□□□□ 0.67
LINC01088-201ENST00000437737 AKAP4Q5JQC9 854 aa19.21■□□□□ 0.67
LINC01088-201ENST00000437737 BICDL1Q6ZP65 573 aa19.2■□□□□ 0.66
LINC01088-201ENST00000437737 MORC1Q86VD1 984 aa19.2■□□□□ 0.66
LINC01088-201ENST00000437737 BCL2L12Q9HB09 334 aa19.2■□□□□ 0.66
LINC01088-201ENST00000437737 MKRN1Q9UHC7 482 aaKnown RBP19.2■□□□□ 0.66
LINC01088-201ENST00000437737 ERFEQ4G0M1 354 aa19.19■□□□□ 0.66
LINC01088-201ENST00000437737 ZNF622Q969S3 477 aaKnown RBP eCLIP19.19■□□□□ 0.663e-6■■□□□ 12.6
LINC01088-201ENST00000437737 PANK3Q9H999 370 aa19.19■□□□□ 0.66
LINC01088-201ENST00000437737 LGR6Q9HBX8 967 aa19.19■□□□□ 0.66
LINC01088-201ENST00000437737 ZNF219Q9P2Y4 722 aaPredicted RBP19.19■□□□□ 0.66
LINC01088-201ENST00000437737 MRC1P22897 1456 aa19.19■□□□□ 0.66
LINC01088-201ENST00000437737 FER1L6Q2WGJ9 1857 aa19.19■□□□□ 0.66
LINC01088-201ENST00000437737 ANKRD31Q8N7Z5 1873 aa19.19■□□□□ 0.66
LINC01088-201ENST00000437737 CANXP27824 592 aaKnown RBP19.18■□□□□ 0.66
LINC01088-201ENST00000437737 CHADLQ6NUI6 762 aa19.18■□□□□ 0.66
LINC01088-201ENST00000437737 CREBZFQ9NS37 354 aa19.18■□□□□ 0.66
LINC01088-201ENST00000437737 CACNA1SQ13698 1873 aa19.18■□□□□ 0.66
LINC01088-201ENST00000437737 C21orf2O43822 256 aa19.17■□□□□ 0.66
LINC01088-201ENST00000437737 COL11A2P13942 1736 aaPredicted RBP19.17■□□□□ 0.66
LINC01088-201ENST00000437737 RNMTO43148 476 aaKnown RBP19.16■□□□□ 0.66
LINC01088-201ENST00000437737 IL13P35225 146 aa19.16■□□□□ 0.66
LINC01088-201ENST00000437737 UBR2Q8IWV8 1755 aa19.15■□□□□ 0.66
LINC01088-201ENST00000437737 PDE6BP35913 854 aa19.14■□□□□ 0.65
LINC01088-201ENST00000437737 VSIG10Q8N0Z9 540 aa19.14■□□□□ 0.65
LINC01088-201ENST00000437737 TAOK3Q9H2K8 898 aa19.14■□□□□ 0.65
LINC01088-201ENST00000437737 TIMELESSQ9UNS1 1208 aa19.14■□□□□ 0.65
LINC01088-201ENST00000437737 PDZRN3Q9UPQ7 1066 aa19.14■□□□□ 0.65
LINC01088-201ENST00000437737 SCN7AQ01118 1682 aa19.14■□□□□ 0.65
LINC01088-201ENST00000437737 A0A087WZG4 1122 aa19.13■□□□□ 0.65
LINC01088-201ENST00000437737 POTEIP0CG38 1075 aa19.13■□□□□ 0.65
LINC01088-201ENST00000437737 POTEJP0CG39 1038 aa19.13■□□□□ 0.65
LINC01088-201ENST00000437737 TBC1D9BQ66K14 1250 aa19.13■□□□□ 0.65
LINC01088-201ENST00000437737 FOXN1O15353 648 aa19.12■□□□□ 0.65
LINC01088-201ENST00000437737 DDNO94850 711 aaPredicted RBP19.12■□□□□ 0.65
LINC01088-201ENST00000437737 TTC5Q8N0Z6 440 aa19.12■□□□□ 0.65
LINC01088-201ENST00000437737 CCDC24Q8N4L8 307 aa19.12■□□□□ 0.65
LINC01088-201ENST00000437737 BRIP1Q9BX63 1249 aa19.12■□□□□ 0.65
LINC01088-201ENST00000437737 ZNF330Q9Y3S2 320 aaPredicted RBP19.12■□□□□ 0.65
LINC01088-201ENST00000437737 CNTNAP1P78357 1384 aa19.11■□□□□ 0.65
LINC01088-201ENST00000437737 NPHP1O15259 732 aa19.11■□□□□ 0.65
LINC01088-201ENST00000437737 STARD3NLO95772 234 aa19.11■□□□□ 0.65
LINC01088-201ENST00000437737 HMOX1P09601 288 aa19.11■□□□□ 0.65
LINC01088-201ENST00000437737 EIF5P55010 431 aaKnown RBP19.11■□□□□ 0.65
LINC01088-201ENST00000437737 PRR5LQ6MZQ0 368 aa19.11■□□□□ 0.65
LINC01088-201ENST00000437737 AIDAQ96BJ3 306 aa19.11■□□□□ 0.65
LINC01088-201ENST00000437737 LTBP3Q9NS15 1303 aa19.1■□□□□ 0.65
LINC01088-201ENST00000437737 SLX4Q8IY92 1834 aa19.1■□□□□ 0.65
LINC01088-201ENST00000437737 SCN4AP35499 1836 aa19.09■□□□□ 0.65
LINC01088-201ENST00000437737 ARFGEF2Q9Y6D5 1785 aa19.09■□□□□ 0.65
LINC01088-201ENST00000437737 IQCA1LA6NCM1 817 aa19.09■□□□□ 0.65
LINC01088-201ENST00000437737 PRDM10Q9NQV6 1147 aa19.09■□□□□ 0.65
LINC01088-201ENST00000437737 MTHFSDQ2M296 383 aaKnown RBP19.08■□□□□ 0.64
LINC01088-201ENST00000437737 CNKSR1Q969H4 720 aa19.08■□□□□ 0.64
LINC01088-201ENST00000437737 TBC1D2BQ9UPU7 963 aa19.08■□□□□ 0.64
LINC01088-201ENST00000437737 KNSTRNQ9Y448 316 aa19.08■□□□□ 0.64
LINC01088-201ENST00000437737 CTCFP49711 727 aaPredicted RBP19.07■□□□□ 0.64
LINC01088-201ENST00000437737 SOGA3Q5TF21 947 aa19.07■□□□□ 0.64
LINC01088-201ENST00000437737 NPM2Q86SE8 214 aaKnown RBP19.07■□□□□ 0.64
LINC01088-201ENST00000437737 LDHDQ86WU2 507 aa19.07■□□□□ 0.64
LINC01088-201ENST00000437737 CNBD1Q8NA66 436 aa19.07■□□□□ 0.64
LINC01088-201ENST00000437737 PASKQ96RG2 1323 aa19.06■□□□□ 0.64
LINC01088-201ENST00000437737 EIF4G2P78344 907 aaKnown RBP eCLIP19.06■□□□□ 0.641e-7■■■■□ 19.4
LINC01088-201ENST00000437737 ST5P78524 1137 aa19.06■□□□□ 0.64
LINC01088-201ENST00000437737 PRPF40BQ6NWY9 871 aaKnown RBP19.06■□□□□ 0.64
LINC01088-201ENST00000437737 TMEM88BA6NKF7 163 aa19.05■□□□□ 0.64
LINC01088-201ENST00000437737 HSPA5P11021 654 aaKnown RBP19.05■□□□□ 0.64
LINC01088-201ENST00000437737 STYK1Q6J9G0 422 aa19.05■□□□□ 0.64
LINC01088-201ENST00000437737 SETDB2Q96T68 719 aa19.05■□□□□ 0.64
LINC01088-201ENST00000437737 VEGFBP49765 207 aa19.04■□□□□ 0.64
LINC01088-201ENST00000437737 EAPPQ56P03 285 aaPredicted RBP19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 211.5 ms