RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 TATP17735 454 aaPredicted RBP7.81□□□□□ -1.16
HMGB1P31-201ENST00000437242 MCM6Q14566 821 aa7.81□□□□□ -1.16
HMGB1P31-201ENST00000437242 GRIN2CQ14957 1233 aa7.8□□□□□ -1.16
HMGB1P31-201ENST00000437242 ARSJQ5FYB0 599 aaPredicted RBP7.8□□□□□ -1.16
HMGB1P31-201ENST00000437242 A0A1W2PNR3 127 aa7.79□□□□□ -1.16
HMGB1P31-201ENST00000437242 DCDC2BA2VCK2 349 aa7.79□□□□□ -1.16
HMGB1P31-201ENST00000437242 KRBA1A5PL33 1030 aa7.79□□□□□ -1.16
HMGB1P31-201ENST00000437242 NEURL1BA8MQ27 555 aa7.79□□□□□ -1.16
HMGB1P31-201ENST00000437242 TMEM229AB2RXF0 380 aa7.79□□□□□ -1.16
HMGB1P31-201ENST00000437242 ADAM23O75077 832 aa7.79□□□□□ -1.16
HMGB1P31-201ENST00000437242 EPXP11678 715 aa7.79□□□□□ -1.16
HMGB1P31-201ENST00000437242 EML3Q32P44 896 aa7.79□□□□□ -1.16
HMGB1P31-201ENST00000437242 CABP1Q9NZU7 370 aa7.79□□□□□ -1.16
HMGB1P31-201ENST00000437242 GJA3Q9Y6H8 435 aa7.79□□□□□ -1.16
HMGB1P31-201ENST00000437242 A6NJY4 79 aa7.78□□□□□ -1.16
HMGB1P31-201ENST00000437242 PIK3CDO00329 1044 aa7.78□□□□□ -1.16
HMGB1P31-201ENST00000437242 CDK2AP1O14519 115 aa7.78□□□□□ -1.16
HMGB1P31-201ENST00000437242 GNB5O14775 395 aa7.78□□□□□ -1.16
HMGB1P31-201ENST00000437242 COL8A1P27658 744 aa7.78□□□□□ -1.16
HMGB1P31-201ENST00000437242 MTFR1Q15390 333 aa7.78□□□□□ -1.16
HMGB1P31-201ENST00000437242 SLC4A9Q96Q91 983 aa7.78□□□□□ -1.16
HMGB1P31-201ENST00000437242 ZDHHC3Q9NYG2 299 aa7.78□□□□□ -1.16
HMGB1P31-201ENST00000437242 KHNYNO15037 678 aaKnown RBP7.77□□□□□ -1.17
HMGB1P31-201ENST00000437242 MAPTP10636 758 aaKnown RBP7.77□□□□□ -1.17
HMGB1P31-201ENST00000437242 SKIP12755 728 aa7.77□□□□□ -1.17
HMGB1P31-201ENST00000437242 CD33P20138 364 aa7.77□□□□□ -1.17
HMGB1P31-201ENST00000437242 ADH6P28332 368 aa7.77□□□□□ -1.17
HMGB1P31-201ENST00000437242 PSME1Q06323 249 aa7.77□□□□□ -1.17
HMGB1P31-201ENST00000437242 BTBD6Q96KE9 485 aa7.77□□□□□ -1.17
HMGB1P31-201ENST00000437242 IQSEC3Q9UPP2 1182 aaPredicted RBP7.77□□□□□ -1.17
HMGB1P31-201ENST00000437242 USP3Q9Y6I4 520 aa7.77□□□□□ -1.17
HMGB1P31-201ENST00000437242 BACH1O14867 736 aa7.76□□□□□ -1.17
HMGB1P31-201ENST00000437242 HOXB4P17483 251 aaPredicted RBP7.76□□□□□ -1.17
HMGB1P31-201ENST00000437242 TNP2Q05952 138 aa7.76□□□□□ -1.17
HMGB1P31-201ENST00000437242 FAM182BQ5T319 152 aa7.76□□□□□ -1.17
HMGB1P31-201ENST00000437242 LINC00114Q6XXX2 140 aa7.76□□□□□ -1.17
HMGB1P31-201ENST00000437242 BICDL1Q6ZP65 573 aa7.76□□□□□ -1.17
HMGB1P31-201ENST00000437242 WWC1Q8IX03 1113 aa7.76□□□□□ -1.17
HMGB1P31-201ENST00000437242 ZNF295-AS1Q8N0V1 137 aa7.76□□□□□ -1.17
HMGB1P31-201ENST00000437242 SUV39H2Q9H5I1 410 aa7.76□□□□□ -1.17
HMGB1P31-201ENST00000437242 NOD1Q9Y239 953 aa7.76□□□□□ -1.17
HMGB1P31-201ENST00000437242 COG6Q9Y2V7 657 aa7.76□□□□□ -1.17
HMGB1P31-201ENST00000437242 PCDHGA11Q9Y5H2 935 aa7.76□□□□□ -1.17
HMGB1P31-201ENST00000437242 FAM157BP0CG42 384 aa7.75□□□□□ -1.17
HMGB1P31-201ENST00000437242 DGKGP49619 791 aa7.75□□□□□ -1.17
HMGB1P31-201ENST00000437242 GTF2IP78347 998 aa7.75□□□□□ -1.17
HMGB1P31-201ENST00000437242 ZIC5Q96T25 663 aa7.75□□□□□ -1.17
HMGB1P31-201ENST00000437242 AVENQ9NQS1 362 aaPredicted RBP7.75□□□□□ -1.17
HMGB1P31-201ENST00000437242 NOP53Q9NZM5 478 aaKnown RBP7.75□□□□□ -1.17
HMGB1P31-201ENST00000437242 K7ELQ4 463 aaPredicted RBP7.74□□□□□ -1.17
HMGB1P31-201ENST00000437242 BAG6P46379 1132 aa7.74□□□□□ -1.17
HMGB1P31-201ENST00000437242 CHSY3Q70JA7 882 aa7.74□□□□□ -1.17
HMGB1P31-201ENST00000437242 LZTS3O60299 673 aaPredicted RBP7.73□□□□□ -1.17
HMGB1P31-201ENST00000437242 NCOA4Q13772 614 aa7.73□□□□□ -1.17
HMGB1P31-201ENST00000437242 SAMD5Q5TGI4 173 aa7.73□□□□□ -1.17
HMGB1P31-201ENST00000437242 NFATC2IPQ8NCF5 419 aa7.73□□□□□ -1.17
HMGB1P31-201ENST00000437242 SCHIP1Q9P0W5 487 aaPredicted RBP7.73□□□□□ -1.17
HMGB1P31-201ENST00000437242 PRR12Q9ULL5 1215 aa7.73□□□□□ -1.17
HMGB1P31-201ENST00000437242 PARP3Q9Y6F1 533 aa7.73□□□□□ -1.17
HMGB1P31-201ENST00000437242 ZNF468Q5VIY5 522 aaPredicted RBP7.72□□□□□ -1.17
HMGB1P31-201ENST00000437242 FCHSD1Q86WN1 690 aa7.72□□□□□ -1.17
HMGB1P31-201ENST00000437242 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.72□□□□□ -1.17
HMGB1P31-201ENST00000437242 ALG2Q9H553 416 aa7.72□□□□□ -1.17
HMGB1P31-201ENST00000437242 ZNF358Q9NW07 568 aa7.72□□□□□ -1.17
HMGB1P31-201ENST00000437242 USP17L5A8MUK1 530 aa7.71□□□□□ -1.18
HMGB1P31-201ENST00000437242 TXLNAP40222 546 aa7.71□□□□□ -1.18
HMGB1P31-201ENST00000437242 PCBP4P57723 403 aaKnown RBP7.71□□□□□ -1.18
HMGB1P31-201ENST00000437242 MARK1Q9P0L2 795 aa7.71□□□□□ -1.18
HMGB1P31-201ENST00000437242 KLF15Q9UIH9 416 aa7.71□□□□□ -1.18
HMGB1P31-201ENST00000437242 HCN2Q9UL51 889 aa7.71□□□□□ -1.18
HMGB1P31-201ENST00000437242 LAMC2Q13753 1193 aa7.7□□□□□ -1.18
HMGB1P31-201ENST00000437242 ZDHHC1Q8WTX9 485 aa7.7□□□□□ -1.18
HMGB1P31-201ENST00000437242 ZNF232Q9UNY5 417 aa7.7□□□□□ -1.18
HMGB1P31-201ENST00000437242 C1QTNF9BB2RNN3 333 aa7.69□□□□□ -1.18
HMGB1P31-201ENST00000437242 EFSO43281 561 aa7.69□□□□□ -1.18
HMGB1P31-201ENST00000437242 RAD21O60216 631 aa7.69□□□□□ -1.18
HMGB1P31-201ENST00000437242 TEAD4Q15561 434 aa7.69□□□□□ -1.18
HMGB1P31-201ENST00000437242 SLC9A9Q8IVB4 645 aa7.69□□□□□ -1.18
HMGB1P31-201ENST00000437242 DEPDC4Q8N2C3 294 aa7.69□□□□□ -1.18
HMGB1P31-201ENST00000437242 L3MBTL2Q969R5 705 aa7.69□□□□□ -1.18
HMGB1P31-201ENST00000437242 NEUROD4Q9HD90 331 aa7.69□□□□□ -1.18
HMGB1P31-201ENST00000437242 STRN4Q9NRL3 753 aa7.69□□□□□ -1.18
HMGB1P31-201ENST00000437242 FURINP09958 794 aa7.68□□□□□ -1.18
HMGB1P31-201ENST00000437242 NOS2P35228 1153 aa7.68□□□□□ -1.18
HMGB1P31-201ENST00000437242 LRRC69Q6ZNQ3 347 aa7.68□□□□□ -1.18
HMGB1P31-201ENST00000437242 TRIM50Q86XT4 487 aa7.68□□□□□ -1.18
HMGB1P31-201ENST00000437242 POM121Q96HA1 1249 aa7.68□□□□□ -1.18
HMGB1P31-201ENST00000437242 EPHA4P54764 986 aa7.67□□□□□ -1.18
HMGB1P31-201ENST00000437242 TBCELQ5QJ74 424 aa7.67□□□□□ -1.18
HMGB1P31-201ENST00000437242 CD163Q86VB7 1156 aa7.67□□□□□ -1.18
HMGB1P31-201ENST00000437242 GPC6Q9Y625 555 aaPredicted RBP7.67□□□□□ -1.18
HMGB1P31-201ENST00000437242 ELOA3CA0A087WX78 387 aaPredicted RBP7.66□□□□□ -1.18
HMGB1P31-201ENST00000437242 SERTM1A2A2V5 107 aa7.66□□□□□ -1.18
HMGB1P31-201ENST00000437242 ELOA3DA6NLF2 546 aaPredicted RBP7.66□□□□□ -1.18
HMGB1P31-201ENST00000437242 EML1O00423 815 aa7.66□□□□□ -1.18
HMGB1P31-201ENST00000437242 CHRNA4P43681 627 aa7.66□□□□□ -1.18
HMGB1P31-201ENST00000437242 ELOA3BQ3SY89 546 aa7.66□□□□□ -1.18
HMGB1P31-201ENST00000437242 SYT9Q86SS6 491 aa7.66□□□□□ -1.18
HMGB1P31-201ENST00000437242 TNS4Q8IZW8 715 aa7.66□□□□□ -1.18
HMGB1P31-201ENST00000437242 ELOA3Q8NG57 546 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms