RNA–Protein interactions for RNA: ENST00000437201.5

SBDSP1-203, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 1 (best)

Gene SBDSP1, Length 839 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-203ENST00000437201 COL15A1P39059 1388 aa23.33■■□□□ 1.33
SBDSP1-203ENST00000437201 A0A087WZG4 1122 aa23.33■■□□□ 1.33
SBDSP1-203ENST00000437201 USPL1Q5W0Q7 1092 aa23.33■■□□□ 1.33
SBDSP1-203ENST00000437201 PNNQ9H307 717 aaKnown RBP23.33■■□□□ 1.33
SBDSP1-203ENST00000437201 UBR2Q8IWV8 1755 aa23.32■■□□□ 1.32
SBDSP1-203ENST00000437201 CANXP27824 592 aaKnown RBP23.31■■□□□ 1.32
SBDSP1-203ENST00000437201 RALBP1Q15311 655 aa23.31■■□□□ 1.32
SBDSP1-203ENST00000437201 NPM2Q86SE8 214 aaKnown RBP23.31■■□□□ 1.32
SBDSP1-203ENST00000437201 PXDNLA1KZ92 1463 aa23.3■■□□□ 1.32
SBDSP1-203ENST00000437201 A0A0G2JLW4 131 aa23.3■■□□□ 1.32
SBDSP1-203ENST00000437201 TM4SF1P30408 202 aa23.3■■□□□ 1.32
SBDSP1-203ENST00000437201 KIF13BQ9NQT8 1826 aa23.29■■□□□ 1.32
SBDSP1-203ENST00000437201 WWC3Q9ULE0 1092 aa23.29■■□□□ 1.32
SBDSP1-203ENST00000437201 EIF5P55010 431 aaKnown RBP23.28■■□□□ 1.32
SBDSP1-203ENST00000437201 DDR1Q08345 913 aa23.28■■□□□ 1.32
SBDSP1-203ENST00000437201 MCM10Q7L590 875 aa23.28■■□□□ 1.32
SBDSP1-203ENST00000437201 SIPA1L3O60292 1781 aaPredicted RBP23.27■■□□□ 1.32
SBDSP1-203ENST00000437201 POLRMTO00411 1230 aaKnown RBP23.27■■□□□ 1.32
SBDSP1-203ENST00000437201 DPEP1P16444 411 aa23.27■■□□□ 1.32
SBDSP1-203ENST00000437201 BCS1LQ9Y276 419 aa23.27■■□□□ 1.32
SBDSP1-203ENST00000437201 IL6STP40189 918 aaPredicted RBP23.26■■□□□ 1.31
SBDSP1-203ENST00000437201 PIM2Q9P1W9 311 aa23.25■■□□□ 1.31
SBDSP1-203ENST00000437201 SNRPA1P09661 255 aaKnown RBP23.24■■□□□ 1.31
SBDSP1-203ENST00000437201 NFIXQ14938 502 aa23.24■■□□□ 1.31
SBDSP1-203ENST00000437201 TAF7Q15545 349 aaPredicted RBP23.24■■□□□ 1.31
SBDSP1-203ENST00000437201 KCNQ3O43525 872 aa23.23■■□□□ 1.31
SBDSP1-203ENST00000437201 GIGYF1O75420 1035 aaPredicted RBP23.23■■□□□ 1.31
SBDSP1-203ENST00000437201 DDX10Q13206 875 aaKnown RBP23.23■■□□□ 1.31
SBDSP1-203ENST00000437201 ZNF330Q9Y3S2 320 aaPredicted RBP23.23■■□□□ 1.31
SBDSP1-203ENST00000437201 MAPK8IP3Q9UPT6 1336 aa23.23■■□□□ 1.31
SBDSP1-203ENST00000437201 DCTN1Q14203 1278 aa23.22■■□□□ 1.31
SBDSP1-203ENST00000437201 PNISRQ8TF01 805 aaKnown RBP23.22■■□□□ 1.31
SBDSP1-203ENST00000437201 PLEKHF1Q96S99 279 aa23.22■■□□□ 1.31
SBDSP1-203ENST00000437201 SERPINB2P05120 415 aa23.21■■□□□ 1.31
SBDSP1-203ENST00000437201 KCNA3P22001 575 aa23.21■■□□□ 1.31
SBDSP1-203ENST00000437201 DALRD3Q5D0E6 543 aaKnown RBP23.21■■□□□ 1.31
SBDSP1-203ENST00000437201 BCL2L12Q9HB09 334 aa23.21■■□□□ 1.31
SBDSP1-203ENST00000437201 N4BP2Q86UW6 1770 aaPredicted RBP23.2■■□□□ 1.3
SBDSP1-203ENST00000437201 ATP10DQ9P241 1426 aa23.2■■□□□ 1.3
SBDSP1-203ENST00000437201 A1BGP04217 495 aa23.2■■□□□ 1.3
SBDSP1-203ENST00000437201 NFE2L2Q16236 605 aa23.2■■□□□ 1.3
SBDSP1-203ENST00000437201 ARHGAP27Q6ZUM4 889 aa23.2■■□□□ 1.3
SBDSP1-203ENST00000437201 KIAA1551Q9HCM1 1747 aa23.19■■□□□ 1.3
SBDSP1-203ENST00000437201 C1QTNF8P60827 252 aa23.19■■□□□ 1.3
SBDSP1-203ENST00000437201 TBC1D2BQ9UPU7 963 aa23.19■■□□□ 1.3
SBDSP1-203ENST00000437201 USP16Q9Y5T5 823 aa23.19■■□□□ 1.3
SBDSP1-203ENST00000437201 GPBP1L1Q9HC44 474 aaPredicted RBP23.18■■□□□ 1.3
SBDSP1-203ENST00000437201 ADCY9O60503 1353 aa23.17■■□□□ 1.3
SBDSP1-203ENST00000437201 MYBBP1AQ9BQG0 1328 aaKnown RBP23.17■■□□□ 1.3
SBDSP1-203ENST00000437201 BICDL1Q6ZP65 573 aa23.17■■□□□ 1.3
SBDSP1-203ENST00000437201 CHRNA5P30532 468 aa23.16■■□□□ 1.3
SBDSP1-203ENST00000437201 TBC1D9BQ66K14 1250 aa23.15■■□□□ 1.3
SBDSP1-203ENST00000437201 DZIP3Q86Y13 1208 aaKnown RBP23.15■■□□□ 1.3
SBDSP1-203ENST00000437201 SETDB2Q96T68 719 aa23.15■■□□□ 1.3
SBDSP1-203ENST00000437201 PDZRN3Q9UPQ7 1066 aa23.15■■□□□ 1.3
SBDSP1-203ENST00000437201 CARMIL3Q8ND23 1372 aa23.14■■□□□ 1.29
SBDSP1-203ENST00000437201 H0YIN7 160 aa23.13■■□□□ 1.29
SBDSP1-203ENST00000437201 CAMTA2O94983 1202 aa23.13■■□□□ 1.29
SBDSP1-203ENST00000437201 CLEC4GQ6UXB4 293 aa23.13■■□□□ 1.29
SBDSP1-203ENST00000437201 MIS18AQ9NYP9 233 aa23.13■■□□□ 1.29
SBDSP1-203ENST00000437201 ZNF652Q9Y2D9 606 aa23.13■■□□□ 1.29
SBDSP1-203ENST00000437201 PRAMEF22A3QJZ6 481 aa23.12■■□□□ 1.29
SBDSP1-203ENST00000437201 NPHP1O15259 732 aa23.12■■□□□ 1.29
SBDSP1-203ENST00000437201 NRXN2Q9P2S2 1712 aa23.12■■□□□ 1.29
SBDSP1-203ENST00000437201 BRCA1P38398 1863 aaKnown RBP23.11■■□□□ 1.29
SBDSP1-203ENST00000437201 RGL2O15211 777 aa23.11■■□□□ 1.29
SBDSP1-203ENST00000437201 PDE6BP35913 854 aa23.11■■□□□ 1.29
SBDSP1-203ENST00000437201 LMOD3Q0VAK6 560 aa23.11■■□□□ 1.29
SBDSP1-203ENST00000437201 RIPK4P57078 832 aa23.1■■□□□ 1.29
SBDSP1-203ENST00000437201 C2CD5Q86YS7 1000 aa23.1■■□□□ 1.29
SBDSP1-203ENST00000437201 TTLL6Q8N841 843 aa23.1■■□□□ 1.29
SBDSP1-203ENST00000437201 ZNF526Q8TF50 670 aaPredicted RBP23.1■■□□□ 1.29
SBDSP1-203ENST00000437201 BRIP1Q9BX63 1249 aa23.1■■□□□ 1.29
SBDSP1-203ENST00000437201 SCN7AQ01118 1682 aa23.09■■□□□ 1.29
SBDSP1-203ENST00000437201 AFDNP55196 1824 aaKnown RBP23.09■■□□□ 1.29
SBDSP1-203ENST00000437201 ARFGEF1Q9Y6D6 1849 aa23.08■■□□□ 1.29
SBDSP1-203ENST00000437201 PIP4K2AP48426 406 aaPredicted RBP23.08■■□□□ 1.29
SBDSP1-203ENST00000437201 EIF4A1P60842 406 aaKnown RBP23.08■■□□□ 1.29
SBDSP1-203ENST00000437201 ST5P78524 1137 aa23.08■■□□□ 1.29
SBDSP1-203ENST00000437201 WDR43Q15061 677 aaKnown RBP eCLIP23.08■■□□□ 1.29
SBDSP1-203ENST00000437201 CNBD1Q8NA66 436 aa23.08■■□□□ 1.29
SBDSP1-203ENST00000437201 PRR5LQ6MZQ0 368 aa23.07■■□□□ 1.28
SBDSP1-203ENST00000437201 THUMPD2Q9BTF0 503 aaKnown RBP23.07■■□□□ 1.28
SBDSP1-203ENST00000437201 BABAM1Q9NWV8 329 aa23.07■■□□□ 1.28
SBDSP1-203ENST00000437201 DLG5Q8TDM6 1919 aa23.07■■□□□ 1.28
SBDSP1-203ENST00000437201 NBPF26B4DH59 902 aa23.06■■□□□ 1.28
SBDSP1-203ENST00000437201 ZEB1P37275 1124 aaPredicted RBP23.06■■□□□ 1.28
SBDSP1-203ENST00000437201 C9orf131Q5VYM1 1079 aa23.06■■□□□ 1.28
SBDSP1-203ENST00000437201 NBPF10Q6P3W6 841 aaKnown RBP23.06■■□□□ 1.28
SBDSP1-203ENST00000437201 NBPF15Q8N660 670 aa23.06■■□□□ 1.28
SBDSP1-203ENST00000437201 SENP3-EIF4A1A0A087X0R7 540 aa23.05■■□□□ 1.28
SBDSP1-203ENST00000437201 TMPOP42166 694 aaKnown RBP23.05■■□□□ 1.28
SBDSP1-203ENST00000437201 TSPYL4Q9UJ04 414 aa23.05■■□□□ 1.28
SBDSP1-203ENST00000437201 NBPF5PQ86XG9 351 aaPredicted RBP23.04■■□□□ 1.28
SBDSP1-203ENST00000437201 ZNF622Q969S3 477 aaKnown RBP eCLIP23.03■■□□□ 1.28
SBDSP1-203ENST00000437201 RUNDC1Q96C34 613 aa23.03■■□□□ 1.28
SBDSP1-203ENST00000437201 PRKRIP1Q9H875 184 aaPredicted RBP23.03■■□□□ 1.28
SBDSP1-203ENST00000437201 TPTE2Q6XPS3 522 aa23.02■■□□□ 1.28
SBDSP1-203ENST00000437201 RNF181Q9P0P0 153 aa23.02■■□□□ 1.28
SBDSP1-203ENST00000437201 KDM3BQ7LBC6 1761 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms