RNA–Protein interactions for RNA: ENST00000437103.1

TOP3B-207, Transcript of DNA topoisomerase III beta, humanhuman

TSL 4

Gene TOP3B, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-207ENST00000437103 PARP3Q9Y6F1 533 aa16.26■□□□□ 0.19
TOP3B-207ENST00000437103 COL5A3P25940 1745 aaPredicted RBP16.25■□□□□ 0.19
TOP3B-207ENST00000437103 GRIN3BO60391 1043 aa16.25■□□□□ 0.19
TOP3B-207ENST00000437103 IL6STP40189 918 aaPredicted RBP16.25■□□□□ 0.19
TOP3B-207ENST00000437103 RIPK4P57078 832 aa16.25■□□□□ 0.19
TOP3B-207ENST00000437103 NPM2Q86SE8 214 aaKnown RBP16.25■□□□□ 0.19
TOP3B-207ENST00000437103 RUNDC1Q96C34 613 aa16.25■□□□□ 0.19
TOP3B-207ENST00000437103 KCNQ3O43525 872 aa16.24■□□□□ 0.19
TOP3B-207ENST00000437103 CANXP27824 592 aaKnown RBP16.24■□□□□ 0.19
TOP3B-207ENST00000437103 TM4SF1P30408 202 aa16.24■□□□□ 0.19
TOP3B-207ENST00000437103 TMPOP42166 694 aaKnown RBP16.24■□□□□ 0.19
TOP3B-207ENST00000437103 TGFB2P61812 414 aa16.24■□□□□ 0.19
TOP3B-207ENST00000437103 NLGN2Q8NFZ4 835 aa16.24■□□□□ 0.19
TOP3B-207ENST00000437103 ZBTB1Q9Y2K1 713 aa16.24■□□□□ 0.19
TOP3B-207ENST00000437103 ADAMTS8Q9UP79 889 aa16.23■□□□□ 0.19
TOP3B-207ENST00000437103 MYH14Q7Z406 1995 aaKnown RBP16.23■□□□□ 0.19
TOP3B-207ENST00000437103 FKBP8Q14318 412 aa16.22■□□□□ 0.19
TOP3B-207ENST00000437103 USPL1Q5W0Q7 1092 aa16.22■□□□□ 0.19
TOP3B-207ENST00000437103 SRP68Q9UHB9 627 aaKnown RBP16.22■□□□□ 0.19
TOP3B-207ENST00000437103 USP16Q9Y5T5 823 aa16.22■□□□□ 0.19
TOP3B-207ENST00000437103 TJP1Q07157 1748 aa16.22■□□□□ 0.19
TOP3B-207ENST00000437103 A1BGP04217 495 aa16.21■□□□□ 0.19
TOP3B-207ENST00000437103 YY1P25490 414 aa16.21■□□□□ 0.19
TOP3B-207ENST00000437103 COL15A1P39059 1388 aa16.21■□□□□ 0.19
TOP3B-207ENST00000437103 UBR2Q8IWV8 1755 aa16.21■□□□□ 0.18
TOP3B-207ENST00000437103 VIRMAQ69YN4 1812 aaKnown RBP16.2■□□□□ 0.18
TOP3B-207ENST00000437103 RGL2O15211 777 aa16.2■□□□□ 0.18
TOP3B-207ENST00000437103 MIS18AQ9NYP9 233 aa16.2■□□□□ 0.18
TOP3B-207ENST00000437103 SIPA1L3O60292 1781 aaPredicted RBP16.2■□□□□ 0.18
TOP3B-207ENST00000437103 EIF4A1P60842 406 aaKnown RBP16.19■□□□□ 0.18
TOP3B-207ENST00000437103 UTRNP46939 3433 aa16.19■□□□□ 0.18
TOP3B-207ENST00000437103 ANP32CO43423 234 aa16.18■□□□□ 0.18
TOP3B-207ENST00000437103 GIGYF1O75420 1035 aaPredicted RBP16.18■□□□□ 0.18
TOP3B-207ENST00000437103 CLEC4GQ6UXB4 293 aa16.18■□□□□ 0.18
TOP3B-207ENST00000437103 POLRMTO00411 1230 aaKnown RBP16.17■□□□□ 0.18
TOP3B-207ENST00000437103 PELP1Q8IZL8 1130 aaKnown RBP16.17■□□□□ 0.18
TOP3B-207ENST00000437103 BCL2L12Q9HB09 334 aa16.17■□□□□ 0.18
TOP3B-207ENST00000437103 NFIXQ14938 502 aa16.16■□□□□ 0.18
TOP3B-207ENST00000437103 CCDC146Q8IYE0 955 aa16.16■□□□□ 0.18
TOP3B-207ENST00000437103 THUMPD2Q9BTF0 503 aaKnown RBP16.16■□□□□ 0.18
TOP3B-207ENST00000437103 TSPYL4Q9UJ04 414 aa16.16■□□□□ 0.18
TOP3B-207ENST00000437103 TBC1D2BQ9UPU7 963 aa16.16■□□□□ 0.18
TOP3B-207ENST00000437103 YBX3P16989 372 aaKnown RBP eCLIP16.15■□□□□ 0.18
TOP3B-207ENST00000437103 DDR1Q08345 913 aa16.15■□□□□ 0.18
TOP3B-207ENST00000437103 NEUROD2Q15784 382 aa16.15■□□□□ 0.18
TOP3B-207ENST00000437103 PRAMEF22A3QJZ6 481 aa16.14■□□□□ 0.17
TOP3B-207ENST00000437103 CHL1O00533 1208 aa16.14■□□□□ 0.17
TOP3B-207ENST00000437103 SERPINB2P05120 415 aa16.14■□□□□ 0.17
TOP3B-207ENST00000437103 CALD1Q05682 793 aaKnown RBP16.14■□□□□ 0.17
TOP3B-207ENST00000437103 DZIP3Q86Y13 1208 aaKnown RBP16.14■□□□□ 0.17
TOP3B-207ENST00000437103 SETDB2Q96T68 719 aa16.14■□□□□ 0.17
TOP3B-207ENST00000437103 TRIM35Q9UPQ4 493 aa16.14■□□□□ 0.17
TOP3B-207ENST00000437103 PDZRN3Q9UPQ7 1066 aa16.14■□□□□ 0.17
TOP3B-207ENST00000437103 ZNF652Q9Y2D9 606 aa16.14■□□□□ 0.17
TOP3B-207ENST00000437103 ZNF330Q9Y3S2 320 aaPredicted RBP16.14■□□□□ 0.17
TOP3B-207ENST00000437103 GOLGB1Q14789 3259 aaKnown RBP16.14■□□□□ 0.17
TOP3B-207ENST00000437103 C10orf71Q711Q0 1435 aa16.13■□□□□ 0.17
TOP3B-207ENST00000437103 A0A0G2JLW4 131 aa16.13■□□□□ 0.17
TOP3B-207ENST00000437103 PIM2Q9P1W9 311 aa16.13■□□□□ 0.17
TOP3B-207ENST00000437103 RRP7AQ9Y3A4 280 aaKnown RBP16.13■□□□□ 0.17
TOP3B-207ENST00000437103 ERBB4Q15303 1308 aa16.13■□□□□ 0.17
TOP3B-207ENST00000437103 NBPF26B4DH59 902 aa16.12■□□□□ 0.17
TOP3B-207ENST00000437103 CAMTA2O94983 1202 aa16.12■□□□□ 0.17
TOP3B-207ENST00000437103 NCBP3Q53F19 620 aaKnown RBP16.12■□□□□ 0.17
TOP3B-207ENST00000437103 NBPF10Q6P3W6 841 aaKnown RBP16.12■□□□□ 0.17
TOP3B-207ENST00000437103 NBPF15Q8N660 670 aa16.12■□□□□ 0.17
TOP3B-207ENST00000437103 C4AP0C0L4 1744 aa16.11■□□□□ 0.17
TOP3B-207ENST00000437103 ERVV-1B6SEH8 477 aa16.11■□□□□ 0.17
TOP3B-207ENST00000437103 APAF1O14727 1248 aa16.11■□□□□ 0.17
TOP3B-207ENST00000437103 DPEP1P16444 411 aa16.11■□□□□ 0.17
TOP3B-207ENST00000437103 TBC1D9BQ66K14 1250 aa16.11■□□□□ 0.17
TOP3B-207ENST00000437103 CFAP44Q96MT7 982 aa16.11■□□□□ 0.17
TOP3B-207ENST00000437103 DLG5Q8TDM6 1919 aa16.1■□□□□ 0.17
TOP3B-207ENST00000437103 KCNA3P22001 575 aa16.1■□□□□ 0.17
TOP3B-207ENST00000437103 BICDL1Q6ZP65 573 aa16.09■□□□□ 0.17
TOP3B-207ENST00000437103 BRIP1Q9BX63 1249 aa16.09■□□□□ 0.17
TOP3B-207ENST00000437103 PXDNLA1KZ92 1463 aa16.09■□□□□ 0.17
TOP3B-207ENST00000437103 HOXB7P09629 217 aa16.08■□□□□ 0.16
TOP3B-207ENST00000437103 PDE6BP35913 854 aa16.08■□□□□ 0.16
TOP3B-207ENST00000437103 PIP4K2AP48426 406 aaPredicted RBP16.08■□□□□ 0.16
TOP3B-207ENST00000437103 DALRD3Q5D0E6 543 aaKnown RBP16.08■□□□□ 0.16
TOP3B-207ENST00000437103 CHMP4AQ9BY43 222 aa16.08■□□□□ 0.16
TOP3B-207ENST00000437103 BCS1LQ9Y276 419 aa16.08■□□□□ 0.16
TOP3B-207ENST00000437103 CARMIL3Q8ND23 1372 aa16.08■□□□□ 0.16
TOP3B-207ENST00000437103 KIF13BQ9NQT8 1826 aa16.08■□□□□ 0.16
TOP3B-207ENST00000437103 H0YIN7 160 aa16.07■□□□□ 0.16
TOP3B-207ENST00000437103 GNAI1P63096 354 aa16.07■□□□□ 0.16
TOP3B-207ENST00000437103 TPTE2Q6XPS3 522 aa16.07■□□□□ 0.16
TOP3B-207ENST00000437103 MRS2Q9HD23 443 aa16.07■□□□□ 0.16
TOP3B-207ENST00000437103 LAS1LQ9Y4W2 734 aaKnown RBP16.07■□□□□ 0.16
TOP3B-207ENST00000437103 ZNF853P0CG23 659 aa16.06■□□□□ 0.16
TOP3B-207ENST00000437103 CCDC27Q2M243 656 aa16.06■□□□□ 0.16
TOP3B-207ENST00000437103 CCDC184Q52MB2 194 aa16.06■□□□□ 0.16
TOP3B-207ENST00000437103 KIF6Q6ZMV9 814 aa16.06■□□□□ 0.16
TOP3B-207ENST00000437103 IFT57Q9NWB7 429 aa16.06■□□□□ 0.16
TOP3B-207ENST00000437103 KDM3BQ7LBC6 1761 aa16.05■□□□□ 0.16
TOP3B-207ENST00000437103 NPHP1O15259 732 aa16.05■□□□□ 0.16
TOP3B-207ENST00000437103 EIF2S2P20042 333 aaKnown RBP16.05■□□□□ 0.16
TOP3B-207ENST00000437103 ST5P78524 1137 aa16.05■□□□□ 0.16
TOP3B-207ENST00000437103 PRR5LQ6MZQ0 368 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms