RNA–Protein interactions for RNA: ENST00000437034.6

CAST-209, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 3,377 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-209ENST00000437034 SLC45A1Q9Y2W3 748 aa6.4□□□□□ -1.38
CAST-209ENST00000437034 KNSTRNQ9Y448 316 aa6.4□□□□□ -1.38
CAST-209ENST00000437034 NESP48681 1621 aa6.4□□□□□ -1.38
CAST-209ENST00000437034 ADCY10Q96PN6 1610 aa6.4□□□□□ -1.38
CAST-209ENST00000437034 FXNQ16595 210 aa6.4□□□□□ -1.39
CAST-209ENST00000437034 EFCAB2Q5VUJ9 269 aa6.4□□□□□ -1.39
CAST-209ENST00000437034 MORC1Q86VD1 984 aa6.4□□□□□ -1.39
CAST-209ENST00000437034 TBC1D2BQ9UPU7 963 aa6.4□□□□□ -1.39
CAST-209ENST00000437034 CCDC66A2RUB6 948 aa6.39□□□□□ -1.39
CAST-209ENST00000437034 ESPNB1AK53 854 aa6.39□□□□□ -1.39
CAST-209ENST00000437034 MTA2O94776 668 aa6.39□□□□□ -1.39
CAST-209ENST00000437034 IL4RP24394 825 aa6.39□□□□□ -1.39
CAST-209ENST00000437034 NOP9Q86U38 636 aaKnown RBP6.39□□□□□ -1.39
CAST-209ENST00000437034 RNF25Q96BH1 459 aaPredicted RBP6.39□□□□□ -1.39
CAST-209ENST00000437034 MKS1Q9NXB0 559 aa6.39□□□□□ -1.39
CAST-209ENST00000437034 TRMT1Q9NXH9 659 aaKnown RBP6.39□□□□□ -1.39
CAST-209ENST00000437034 SUFUQ9UMX1 484 aa6.39□□□□□ -1.39
CAST-209ENST00000437034 UGGT2Q9NYU1 1516 aa6.39□□□□□ -1.39
CAST-209ENST00000437034 PABPN1LA6NDY0 278 aaKnown RBP6.39□□□□□ -1.39
CAST-209ENST00000437034 NOM1Q5C9Z4 860 aaKnown RBP6.39□□□□□ -1.39
CAST-209ENST00000437034 RELL1Q8IUW5 271 aa6.39□□□□□ -1.39
CAST-209ENST00000437034 NDUFAF2Q8N183 169 aa6.39□□□□□ -1.39
CAST-209ENST00000437034 FAM184AQ8NB25 1140 aa6.39□□□□□ -1.39
CAST-209ENST00000437034 FLCNQ8NFG4 579 aa6.39□□□□□ -1.39
CAST-209ENST00000437034 LZTS2Q9BRK4 669 aa6.39□□□□□ -1.39
CAST-209ENST00000437034 PPCSQ9HAB8 311 aa6.39□□□□□ -1.39
CAST-209ENST00000437034 ELL2O00472 640 aaPredicted RBP6.38□□□□□ -1.39
CAST-209ENST00000437034 FOSP01100 380 aaPredicted RBP6.38□□□□□ -1.39
CAST-209ENST00000437034 SH3BGRP55822 239 aaPredicted RBP6.38□□□□□ -1.39
CAST-209ENST00000437034 XPCQ01831 940 aaPredicted RBP6.38□□□□□ -1.39
CAST-209ENST00000437034 PPP2R5BQ15173 497 aa6.38□□□□□ -1.39
CAST-209ENST00000437034 CCDC93Q567U6 631 aa6.38□□□□□ -1.39
CAST-209ENST00000437034 ZNF771Q7L3S4 317 aaPredicted RBP6.38□□□□□ -1.39
CAST-209ENST00000437034 ELOA2Q8IYF1 753 aaPredicted RBP6.38□□□□□ -1.39
CAST-209ENST00000437034 TRIM11Q96F44 468 aa6.38□□□□□ -1.39
CAST-209ENST00000437034 AQRO60306 1485 aaKnown RBP eCLIP6.38□□□□□ -1.393e-6■■■■□ 24.7
CAST-209ENST00000437034 MAGI1Q96QZ7 1491 aaPredicted RBP6.38□□□□□ -1.39
CAST-209ENST00000437034 IL16Q14005 1332 aa6.38□□□□□ -1.39
CAST-209ENST00000437034 GJC2Q5T442 439 aaPredicted RBP6.38□□□□□ -1.39
CAST-209ENST00000437034 MSL1Q68DK7 614 aa6.38□□□□□ -1.39
CAST-209ENST00000437034 RPUSD2Q8IZ73 545 aaKnown RBP6.38□□□□□ -1.39
CAST-209ENST00000437034 TIGD1Q96MW7 591 aa6.38□□□□□ -1.39
CAST-209ENST00000437034 TRIM6Q9C030 488 aaPredicted RBP6.38□□□□□ -1.39
CAST-209ENST00000437034 INTUQ9ULD6 942 aa6.38□□□□□ -1.39
CAST-209ENST00000437034 PAXBP1Q9Y5B6 917 aa6.38□□□□□ -1.39
CAST-209ENST00000437034 TRPC1P48995 793 aa6.38□□□□□ -1.39
CAST-209ENST00000437034 CLK1P49759 484 aaKnown RBP6.38□□□□□ -1.39
CAST-209ENST00000437034 ZNF132P52740 706 aa6.38□□□□□ -1.39
CAST-209ENST00000437034 CHAF1AQ13111 956 aaPredicted RBP6.38□□□□□ -1.39
CAST-209ENST00000437034 AMOTQ4VCS5 1084 aa6.38□□□□□ -1.39
CAST-209ENST00000437034 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.38□□□□□ -1.39
CAST-209ENST00000437034 DCAF11Q8TEB1 546 aa6.38□□□□□ -1.39
CAST-209ENST00000437034 FAM212AQ96EL1 285 aa6.38□□□□□ -1.39
CAST-209ENST00000437034 MED4Q9NPJ6 270 aa6.38□□□□□ -1.39
CAST-209ENST00000437034 SOGA3Q5TF21 947 aa6.37□□□□□ -1.39
CAST-209ENST00000437034 PCGF5Q86SE9 256 aa6.37□□□□□ -1.39
CAST-209ENST00000437034 ANKRD13BQ86YJ7 626 aa6.37□□□□□ -1.39
CAST-209ENST00000437034 TMC2Q8TDI7 906 aa6.37□□□□□ -1.39
CAST-209ENST00000437034 IPO9Q96P70 1041 aaKnown RBP6.37□□□□□ -1.39
CAST-209ENST00000437034 PCDH12Q9NPG4 1184 aa6.37□□□□□ -1.39
CAST-209ENST00000437034 IFT57Q9NWB7 429 aa6.37□□□□□ -1.39
CAST-209ENST00000437034 EVLQ9UI08 416 aaPredicted RBP6.37□□□□□ -1.39
CAST-209ENST00000437034 THRAP3Q9Y2W1 955 aaKnown RBP6.37□□□□□ -1.39
CAST-209ENST00000437034 TBX22Q9Y458 520 aa6.37□□□□□ -1.39
CAST-209ENST00000437034 TPPPO94811 219 aa6.37□□□□□ -1.39
CAST-209ENST00000437034 RBP3P10745 1247 aa6.37□□□□□ -1.39
CAST-209ENST00000437034 CTR9Q6PD62 1173 aa6.37□□□□□ -1.39
CAST-209ENST00000437034 HDGFL2Q7Z4V5 671 aaPredicted RBP6.37□□□□□ -1.39
CAST-209ENST00000437034 TRIM74Q86UV6 250 aa6.37□□□□□ -1.39
CAST-209ENST00000437034 TRIM73Q86UV7 250 aa6.37□□□□□ -1.39
CAST-209ENST00000437034 KIAA1958Q8N8K9 716 aa6.37□□□□□ -1.39
CAST-209ENST00000437034 C17orf50Q8WW18 174 aa6.37□□□□□ -1.39
CAST-209ENST00000437034 TBC1D31Q96DN5 1066 aa6.37□□□□□ -1.39
CAST-209ENST00000437034 PDGFDQ9GZP0 370 aaPredicted RBP6.37□□□□□ -1.39
CAST-209ENST00000437034 TMOD4Q9NZQ9 345 aa6.37□□□□□ -1.39
CAST-209ENST00000437034 AKAP2Q9Y2D5 859 aa6.37□□□□□ -1.39
CAST-209ENST00000437034 MRPL42Q9Y6G3 142 aaKnown RBP6.37□□□□□ -1.39
CAST-209ENST00000437034 V9GYY5 206 aaPredicted RBP6.37□□□□□ -1.39
CAST-209ENST00000437034 SLMAPQ14BN4 828 aa6.37□□□□□ -1.39
CAST-209ENST00000437034 KLHL10Q6JEL2 608 aa6.37□□□□□ -1.39
CAST-209ENST00000437034 CCDC89Q8N998 374 aa6.37□□□□□ -1.39
CAST-209ENST00000437034 POLR3CQ9BUI4 534 aaPredicted RBP6.37□□□□□ -1.39
CAST-209ENST00000437034 IKBKGQ9Y6K9 419 aa6.37□□□□□ -1.39
CAST-209ENST00000437034 PRSS47A8MTI9 375 aa6.36□□□□□ -1.39
CAST-209ENST00000437034 BOLA2-SMG1P6H3BVE0 249 aa6.36□□□□□ -1.39
CAST-209ENST00000437034 RECKO95980 971 aa6.36□□□□□ -1.39
CAST-209ENST00000437034 RASA3Q14644 834 aa6.36□□□□□ -1.39
CAST-209ENST00000437034 COL19A1Q14993 1142 aa6.36□□□□□ -1.39
CAST-209ENST00000437034 JAZF1Q86VZ6 243 aa6.36□□□□□ -1.39
CAST-209ENST00000437034 RAVER1Q8IY67 606 aaKnown RBP6.36□□□□□ -1.39
CAST-209ENST00000437034 TDRD7Q8NHU6 1098 aaKnown RBP6.36□□□□□ -1.39
CAST-209ENST00000437034 HELQQ8TDG4 1101 aa6.36□□□□□ -1.39
CAST-209ENST00000437034 USTQ9Y2C2 406 aa6.36□□□□□ -1.39
CAST-209ENST00000437034 ODR4Q5SWX8 454 aa6.36□□□□□ -1.39
CAST-209ENST00000437034 CATIPQ7Z7H3 387 aa6.36□□□□□ -1.39
CAST-209ENST00000437034 SNX32Q86XE0 403 aa6.36□□□□□ -1.39
CAST-209ENST00000437034 CERKQ8TCT0 537 aa6.36□□□□□ -1.39
CAST-209ENST00000437034 TNPO1Q92973 898 aaKnown RBP6.36□□□□□ -1.39
CAST-209ENST00000437034 CENPTQ96BT3 561 aa6.36□□□□□ -1.39
CAST-209ENST00000437034 KIF3AQ9Y496 699 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms