RNA–Protein interactions for RNA: ENST00000435986.1

HMGB1P45-201, Transcript of high mobility group box 1 pseudogene 45, humanhuman

BASIC

Gene HMGB1P45, Length 653 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P45-201ENST00000435986 TSPAN10Q9H1Z9 355 aaPredicted RBP7.52□□□□□ -1.21
HMGB1P45-201ENST00000435986 ARHGEF10LQ9HCE6 1279 aa7.52□□□□□ -1.21
HMGB1P45-201ENST00000435986 SCHIP1Q9P0W5 487 aaPredicted RBP7.52□□□□□ -1.21
HMGB1P45-201ENST00000435986 MAPK1P28482 360 aa7.51□□□□□ -1.21
HMGB1P45-201ENST00000435986 SLC9A9Q8IVB4 645 aa7.51□□□□□ -1.21
HMGB1P45-201ENST00000435986 CNKSR1Q969H4 720 aa7.51□□□□□ -1.21
HMGB1P45-201ENST00000435986 ZFP42Q96MM3 310 aa7.51□□□□□ -1.21
HMGB1P45-201ENST00000435986 CLN3Q13286 438 aa7.5□□□□□ -1.21
HMGB1P45-201ENST00000435986 AAMPQ13685 434 aa7.5□□□□□ -1.21
HMGB1P45-201ENST00000435986 NAA30Q147X3 362 aaPredicted RBP7.5□□□□□ -1.21
HMGB1P45-201ENST00000435986 MTFR1Q15390 333 aa7.5□□□□□ -1.21
HMGB1P45-201ENST00000435986 ZNF326Q5BKZ1 582 aaKnown RBP7.5□□□□□ -1.21
HMGB1P45-201ENST00000435986 C16orf46Q6P387 395 aa7.5□□□□□ -1.21
HMGB1P45-201ENST00000435986 ANO2Q9NQ90 1003 aa7.5□□□□□ -1.21
HMGB1P45-201ENST00000435986 SEPT3Q9UH03 358 aa7.5□□□□□ -1.21
HMGB1P45-201ENST00000435986 DCTN4Q9UJW0 460 aa7.5□□□□□ -1.21
HMGB1P45-201ENST00000435986 A0A1W2PRU2 124 aa7.49□□□□□ -1.21
HMGB1P45-201ENST00000435986 SERTM1A2A2V5 107 aa7.49□□□□□ -1.21
HMGB1P45-201ENST00000435986 NDUFB5O43674 189 aa7.49□□□□□ -1.21
HMGB1P45-201ENST00000435986 UPP2O95045 317 aa7.49□□□□□ -1.21
HMGB1P45-201ENST00000435986 ADD1P35611 737 aaKnown RBP7.49□□□□□ -1.21
HMGB1P45-201ENST00000435986 SCNN1AP37088 669 aa7.49□□□□□ -1.21
HMGB1P45-201ENST00000435986 PTGIRP43119 386 aa7.49□□□□□ -1.21
HMGB1P45-201ENST00000435986 EPHA4P54764 986 aa7.49□□□□□ -1.21
HMGB1P45-201ENST00000435986 Q6ZVU0 165 aa7.49□□□□□ -1.21
HMGB1P45-201ENST00000435986 ABTB2Q8N961 1025 aa7.49□□□□□ -1.21
HMGB1P45-201ENST00000435986 PURBQ96QR8 312 aaKnown RBP7.49□□□□□ -1.21
HMGB1P45-201ENST00000435986 RAB6BQ9NRW1 208 aa7.49□□□□□ -1.21
HMGB1P45-201ENST00000435986 ZNF232Q9UNY5 417 aa7.49□□□□□ -1.21
HMGB1P45-201ENST00000435986 DNMT3AQ9Y6K1 912 aaPredicted RBP7.49□□□□□ -1.21
HMGB1P45-201ENST00000435986 MEN1O00255 615 aa7.48□□□□□ -1.21
HMGB1P45-201ENST00000435986 ITGAEP38570 1179 aa7.48□□□□□ -1.21
HMGB1P45-201ENST00000435986 FGD1P98174 961 aa7.48□□□□□ -1.21
HMGB1P45-201ENST00000435986 CBLBQ13191 982 aa7.48□□□□□ -1.21
HMGB1P45-201ENST00000435986 TMEM214Q6NUQ4 689 aaKnown RBP7.48□□□□□ -1.21
HMGB1P45-201ENST00000435986 LINC00528Q8N1L1 170 aa7.48□□□□□ -1.21
HMGB1P45-201ENST00000435986 ZSCAN10Q96SZ4 725 aaPredicted RBP7.48□□□□□ -1.21
HMGB1P45-201ENST00000435986 C2orf49Q9BVC5 232 aaPredicted RBP7.48□□□□□ -1.21
HMGB1P45-201ENST00000435986 BCL2L13Q9BXK5 485 aa7.48□□□□□ -1.21
HMGB1P45-201ENST00000435986 CABP1Q9NZU7 370 aa7.48□□□□□ -1.21
HMGB1P45-201ENST00000435986 RBM47A0AV96 593 aaKnown RBP7.47□□□□□ -1.21
HMGB1P45-201ENST00000435986 FOXK2Q01167 660 aa7.47□□□□□ -1.21
HMGB1P45-201ENST00000435986 NFX1Q12986 1120 aaKnown RBP7.47□□□□□ -1.21
HMGB1P45-201ENST00000435986 SCARF1Q14162 830 aa7.47□□□□□ -1.21
HMGB1P45-201ENST00000435986 HIF1AQ16665 826 aa7.47□□□□□ -1.21
HMGB1P45-201ENST00000435986 GNASQ5JWF2 1037 aa7.47□□□□□ -1.21
HMGB1P45-201ENST00000435986 CITED4Q96RK1 184 aa7.47□□□□□ -1.21
HMGB1P45-201ENST00000435986 NIFKQ9BYG3 293 aaKnown RBP7.47□□□□□ -1.21
HMGB1P45-201ENST00000435986 BRPF3Q9ULD4 1205 aa7.47□□□□□ -1.21
HMGB1P45-201ENST00000435986 ANKRD33BA6NCL7 494 aa7.46□□□□□ -1.22
HMGB1P45-201ENST00000435986 IL2RAP01589 272 aa7.46□□□□□ -1.22
HMGB1P45-201ENST00000435986 BRD2P25440 801 aaKnown RBP7.46□□□□□ -1.22
HMGB1P45-201ENST00000435986 CENPCQ03188 943 aa7.46□□□□□ -1.22
HMGB1P45-201ENST00000435986 TEAD4Q15561 434 aa7.46□□□□□ -1.22
HMGB1P45-201ENST00000435986 SLC27A3Q5K4L6 730 aa7.46□□□□□ -1.22
HMGB1P45-201ENST00000435986 TREML4Q6UXN2 200 aa7.46□□□□□ -1.22
HMGB1P45-201ENST00000435986 TSEN34Q9BSV6 310 aaKnown RBP7.46□□□□□ -1.22
HMGB1P45-201ENST00000435986 STIM2Q9P246 746 aa7.46□□□□□ -1.22
HMGB1P45-201ENST00000435986 SOBPA7XYQ1 873 aa7.45□□□□□ -1.22
HMGB1P45-201ENST00000435986 STAU1O95793 577 aaKnown RBP7.45□□□□□ -1.22
HMGB1P45-201ENST00000435986 NPR3P17342 541 aa7.45□□□□□ -1.22
HMGB1P45-201ENST00000435986 GPC1P35052 558 aa7.45□□□□□ -1.22
HMGB1P45-201ENST00000435986 RELBQ01201 579 aa7.45□□□□□ -1.22
HMGB1P45-201ENST00000435986 COL19A1Q14993 1142 aa7.45□□□□□ -1.22
HMGB1P45-201ENST00000435986 NOM1Q5C9Z4 860 aaKnown RBP7.45□□□□□ -1.22
HMGB1P45-201ENST00000435986 C6orf118Q5T5N4 469 aa7.45□□□□□ -1.22
HMGB1P45-201ENST00000435986 DNAJC14Q6Y2X3 702 aaPredicted RBP7.45□□□□□ -1.22
HMGB1P45-201ENST00000435986 TTC16Q8NEE8 873 aa7.45□□□□□ -1.22
HMGB1P45-201ENST00000435986 TMC1Q8TDI8 760 aa7.45□□□□□ -1.22
HMGB1P45-201ENST00000435986 ASB16Q96NS5 453 aa7.45□□□□□ -1.22
HMGB1P45-201ENST00000435986 PCSK2P16519 638 aa7.44□□□□□ -1.22
HMGB1P45-201ENST00000435986 NOS2P35228 1153 aa7.44□□□□□ -1.22
HMGB1P45-201ENST00000435986 HIRAP54198 1017 aaPredicted RBP7.44□□□□□ -1.22
HMGB1P45-201ENST00000435986 PDE3BQ13370 1112 aa7.44□□□□□ -1.22
HMGB1P45-201ENST00000435986 TBCELQ5QJ74 424 aa7.44□□□□□ -1.22
HMGB1P45-201ENST00000435986 PPARGC1BQ86YN6 1023 aaKnown RBP7.44□□□□□ -1.22
HMGB1P45-201ENST00000435986 RHBDD1Q8TEB9 315 aa7.44□□□□□ -1.22
HMGB1P45-201ENST00000435986 MYO19Q96H55 970 aa7.44□□□□□ -1.22
HMGB1P45-201ENST00000435986 FAM13BQ9NYF5 915 aa7.44□□□□□ -1.22
HMGB1P45-201ENST00000435986 BMP2P12643 396 aa7.43□□□□□ -1.22
HMGB1P45-201ENST00000435986 MTMR3Q13615 1198 aa7.43□□□□□ -1.22
HMGB1P45-201ENST00000435986 RTN1Q16799 776 aa7.43□□□□□ -1.22
HMGB1P45-201ENST00000435986 NBPF1Q3BBV0 1214 aa7.43□□□□□ -1.22
HMGB1P45-201ENST00000435986 RGL4Q8IZJ4 473 aa7.43□□□□□ -1.22
HMGB1P45-201ENST00000435986 KDF1Q8NAX2 398 aaPredicted RBP7.43□□□□□ -1.22
HMGB1P45-201ENST00000435986 L3MBTL2Q969R5 705 aa7.43□□□□□ -1.22
HMGB1P45-201ENST00000435986 NGLY1Q96IV0 654 aa7.43□□□□□ -1.22
HMGB1P45-201ENST00000435986 SOS2Q07890 1332 aaPredicted RBP7.43□□□□□ -1.22
HMGB1P45-201ENST00000435986 SPINT1O43278 529 aa7.42□□□□□ -1.22
HMGB1P45-201ENST00000435986 MPSTP25325 297 aa7.42□□□□□ -1.22
HMGB1P45-201ENST00000435986 USP5P45974 858 aa7.42□□□□□ -1.22
HMGB1P45-201ENST00000435986 VEGFBP49765 207 aa7.42□□□□□ -1.22
HMGB1P45-201ENST00000435986 ARHGAP4P98171 946 aa7.42□□□□□ -1.22
HMGB1P45-201ENST00000435986 C11orf91Q3C1V1 193 aa7.42□□□□□ -1.22
HMGB1P45-201ENST00000435986 C1orf53Q5VUE5 145 aa7.42□□□□□ -1.22
HMGB1P45-201ENST00000435986 CAPN12Q6ZSI9 719 aa7.42□□□□□ -1.22
HMGB1P45-201ENST00000435986 DMRTB1Q96MA1 342 aa7.42□□□□□ -1.22
HMGB1P45-201ENST00000435986 AGBL1Q96MI9 1066 aa7.42□□□□□ -1.22
HMGB1P45-201ENST00000435986 HRH3Q9Y5N1 445 aa7.42□□□□□ -1.22
HMGB1P45-201ENST00000435986 WFS1O76024 890 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms