RNA–Protein interactions for RNA: ENST00000435914.1

PNKDP1-201, Transcript of PNKD pseudogene 1, humanhuman

BASIC

Gene PNKDP1, Length 430 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKDP1-201ENST00000435914 DLEC1Q9Y238 1755 aa8.35□□□□□ -1.07
PNKDP1-201ENST00000435914 SBF1O95248 1867 aa8.35□□□□□ -1.07
PNKDP1-201ENST00000435914 USPL1Q5W0Q7 1092 aa8.35□□□□□ -1.07
PNKDP1-201ENST00000435914 NARFQ9UHQ1 456 aa8.35□□□□□ -1.07
PNKDP1-201ENST00000435914 BCS1LQ9Y276 419 aa8.35□□□□□ -1.07
PNKDP1-201ENST00000435914 SCN7AQ01118 1682 aa8.34□□□□□ -1.07
PNKDP1-201ENST00000435914 EIF5P55010 431 aaKnown RBP8.34□□□□□ -1.07
PNKDP1-201ENST00000435914 NFIXQ14938 502 aa8.34□□□□□ -1.07
PNKDP1-201ENST00000435914 ZNF496Q96IT1 587 aaPredicted RBP8.34□□□□□ -1.07
PNKDP1-201ENST00000435914 PHACTR3Q96KR7 559 aa8.34□□□□□ -1.07
PNKDP1-201ENST00000435914 RSPH6AQ9H0K4 717 aa8.34□□□□□ -1.07
PNKDP1-201ENST00000435914 HEG1Q9ULI3 1381 aa8.34□□□□□ -1.07
PNKDP1-201ENST00000435914 GNAT3A8MTJ3 354 aa8.33□□□□□ -1.08
PNKDP1-201ENST00000435914 FCHSD2O94868 740 aa8.33□□□□□ -1.08
PNKDP1-201ENST00000435914 CHRNA5P30532 468 aa8.33□□□□□ -1.08
PNKDP1-201ENST00000435914 ZNF790Q6PG37 636 aa8.33□□□□□ -1.08
PNKDP1-201ENST00000435914 ANKRD31Q8N7Z5 1873 aa8.33□□□□□ -1.08
PNKDP1-201ENST00000435914 GAS2L2Q8NHY3 880 aa8.33□□□□□ -1.08
PNKDP1-201ENST00000435914 ZNF526Q8TF50 670 aaPredicted RBP8.33□□□□□ -1.08
PNKDP1-201ENST00000435914 PIM2Q9P1W9 311 aa8.33□□□□□ -1.08
PNKDP1-201ENST00000435914 CARMIL3Q8ND23 1372 aa8.33□□□□□ -1.08
PNKDP1-201ENST00000435914 U2SURPO15042 1029 aaKnown RBP8.32□□□□□ -1.08
PNKDP1-201ENST00000435914 ZPR1O75312 459 aa8.32□□□□□ -1.08
PNKDP1-201ENST00000435914 PPP2R1AP30153 589 aa8.32□□□□□ -1.08
PNKDP1-201ENST00000435914 BCORQ6W2J9 1755 aa8.31□□□□□ -1.08
PNKDP1-201ENST00000435914 KCNQ3O43525 872 aa8.31□□□□□ -1.08
PNKDP1-201ENST00000435914 SERPINB2P05120 415 aa8.31□□□□□ -1.08
PNKDP1-201ENST00000435914 HSPA6P17066 643 aa8.31□□□□□ -1.08
PNKDP1-201ENST00000435914 PRKAR2BP31323 418 aa8.31□□□□□ -1.08
PNKDP1-201ENST00000435914 DALRD3Q5D0E6 543 aaKnown RBP8.31□□□□□ -1.08
PNKDP1-201ENST00000435914 ARHGAP27Q6ZUM4 889 aa8.31□□□□□ -1.08
PNKDP1-201ENST00000435914 COL11A2P13942 1736 aaPredicted RBP8.31□□□□□ -1.08
PNKDP1-201ENST00000435914 STARD3NLO95772 234 aa8.3□□□□□ -1.08
PNKDP1-201ENST00000435914 CANXP27824 592 aaKnown RBP8.3□□□□□ -1.08
PNKDP1-201ENST00000435914 IL6STP40189 918 aaPredicted RBP8.3□□□□□ -1.08
PNKDP1-201ENST00000435914 PRELPP51888 382 aa8.3□□□□□ -1.08
PNKDP1-201ENST00000435914 TEFQ10587 303 aa8.3□□□□□ -1.08
PNKDP1-201ENST00000435914 CNGB1Q14028 1251 aaPredicted RBP8.3□□□□□ -1.08
PNKDP1-201ENST00000435914 C9orf131Q5VYM1 1079 aa8.3□□□□□ -1.08
PNKDP1-201ENST00000435914 TTC5Q8N0Z6 440 aa8.3□□□□□ -1.08
PNKDP1-201ENST00000435914 TEX13AQ9BXU3 409 aaPredicted RBP8.3□□□□□ -1.08
PNKDP1-201ENST00000435914 NMRK2Q9NPI5 230 aa8.3□□□□□ -1.08
PNKDP1-201ENST00000435914 CAMTA2O94983 1202 aa8.29□□□□□ -1.08
PNKDP1-201ENST00000435914 A1BGP04217 495 aa8.29□□□□□ -1.08
PNKDP1-201ENST00000435914 TBC1D9BQ66K14 1250 aa8.29□□□□□ -1.08
PNKDP1-201ENST00000435914 CFAP53Q96M91 514 aa8.29□□□□□ -1.08
PNKDP1-201ENST00000435914 FMNL2Q96PY5 1086 aa8.29□□□□□ -1.08
PNKDP1-201ENST00000435914 USP16Q9Y5T5 823 aa8.29□□□□□ -1.08
PNKDP1-201ENST00000435914 DLG5Q8TDM6 1919 aa8.29□□□□□ -1.08
PNKDP1-201ENST00000435914 FER1L6Q2WGJ9 1857 aa8.28□□□□□ -1.08
PNKDP1-201ENST00000435914 TNRC6CQ9HCJ0 1690 aaKnown RBP8.28□□□□□ -1.08
PNKDP1-201ENST00000435914 A0A087WZG4 1122 aa8.28□□□□□ -1.08
PNKDP1-201ENST00000435914 PRAMEF22A3QJZ6 481 aa8.28□□□□□ -1.08
PNKDP1-201ENST00000435914 BTBD11A6QL63 1104 aa8.28□□□□□ -1.08
PNKDP1-201ENST00000435914 TOMM70O94826 608 aa8.28□□□□□ -1.08
PNKDP1-201ENST00000435914 PRR5LQ6MZQ0 368 aa8.28□□□□□ -1.08
PNKDP1-201ENST00000435914 TBC1D2BQ9UPU7 963 aa8.28□□□□□ -1.08
PNKDP1-201ENST00000435914 CCDC88AQ3V6T2 1871 aa8.28□□□□□ -1.08
PNKDP1-201ENST00000435914 KDM3BQ7LBC6 1761 aa8.27□□□□□ -1.08
PNKDP1-201ENST00000435914 ARFGEF2Q9Y6D5 1785 aa8.27□□□□□ -1.08
PNKDP1-201ENST00000435914 NFKBIEO00221 500 aa8.27□□□□□ -1.09
PNKDP1-201ENST00000435914 HTATSF1O43719 755 aaKnown RBP8.27□□□□□ -1.09
PNKDP1-201ENST00000435914 U2AF1L5P0DN76 240 aaPredicted RBP8.27□□□□□ -1.09
PNKDP1-201ENST00000435914 U2AF1Q01081 240 aaKnown RBP eCLIP8.27□□□□□ -1.09
PNKDP1-201ENST00000435914 RASSF7Q02833 373 aa8.27□□□□□ -1.09
PNKDP1-201ENST00000435914 MCM10Q7L590 875 aa8.27□□□□□ -1.09
PNKDP1-201ENST00000435914 BRIP1Q9BX63 1249 aa8.27□□□□□ -1.09
PNKDP1-201ENST00000435914 RNF181Q9P0P0 153 aa8.27□□□□□ -1.09
PNKDP1-201ENST00000435914 NUDCQ9Y266 331 aa8.27□□□□□ -1.09
PNKDP1-201ENST00000435914 DICER1Q9UPY3 1922 aaKnown RBP8.27□□□□□ -1.09
PNKDP1-201ENST00000435914 ZC3H4Q9UPT8 1303 aaKnown RBP8.27□□□□□ -1.09
PNKDP1-201ENST00000435914 TIAM2Q8IVF5 1701 aa8.26□□□□□ -1.09
PNKDP1-201ENST00000435914 LAMB4A4D0S4 1761 aa8.26□□□□□ -1.09
PNKDP1-201ENST00000435914 NBPF26B4DH59 902 aa8.26□□□□□ -1.09
PNKDP1-201ENST00000435914 DCTN1Q14203 1278 aa8.26□□□□□ -1.09
PNKDP1-201ENST00000435914 NBPF10Q6P3W6 841 aaKnown RBP8.26□□□□□ -1.09
PNKDP1-201ENST00000435914 BICDL1Q6ZP65 573 aa8.26□□□□□ -1.09
PNKDP1-201ENST00000435914 C2CD5Q86YS7 1000 aa8.26□□□□□ -1.09
PNKDP1-201ENST00000435914 NBPF15Q8N660 670 aa8.26□□□□□ -1.09
PNKDP1-201ENST00000435914 DNAJC5GQ8N7S2 189 aa8.26□□□□□ -1.09
PNKDP1-201ENST00000435914 TTLL6Q8N841 843 aa8.26□□□□□ -1.09
PNKDP1-201ENST00000435914 RBM46Q8TBY0 533 aaKnown RBP8.26□□□□□ -1.09
PNKDP1-201ENST00000435914 PLEKHF1Q96S99 279 aa8.26□□□□□ -1.09
PNKDP1-201ENST00000435914 SLX4Q8IY92 1834 aa8.26□□□□□ -1.09
PNKDP1-201ENST00000435914 WDR90Q96KV7 1748 aa8.26□□□□□ -1.09
PNKDP1-201ENST00000435914 H0YIN7 160 aa8.25□□□□□ -1.09
PNKDP1-201ENST00000435914 RGL2O15211 777 aa8.25□□□□□ -1.09
PNKDP1-201ENST00000435914 SNRPA1P09661 255 aaKnown RBP8.25□□□□□ -1.09
PNKDP1-201ENST00000435914 LMNB1P20700 586 aa8.25□□□□□ -1.09
PNKDP1-201ENST00000435914 PIP4K2AP48426 406 aaPredicted RBP8.25□□□□□ -1.09
PNKDP1-201ENST00000435914 CLEC4GQ6UXB4 293 aa8.25□□□□□ -1.09
PNKDP1-201ENST00000435914 DZIP3Q86Y13 1208 aaKnown RBP8.25□□□□□ -1.09
PNKDP1-201ENST00000435914 CCDC24Q8N4L8 307 aa8.25□□□□□ -1.09
PNKDP1-201ENST00000435914 PDZRN3Q9UPQ7 1066 aa8.25□□□□□ -1.09
PNKDP1-201ENST00000435914 PCNTO95613 3336 aa8.24□□□□□ -1.09
PNKDP1-201ENST00000435914 CACNA1SQ13698 1873 aa8.24□□□□□ -1.09
PNKDP1-201ENST00000435914 KLRG2A4D1S0 409 aaPredicted RBP8.24□□□□□ -1.09
PNKDP1-201ENST00000435914 SRGNP10124 158 aa8.24□□□□□ -1.09
PNKDP1-201ENST00000435914 PDE6BP35913 854 aa8.24□□□□□ -1.09
PNKDP1-201ENST00000435914 APLP1P51693 650 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms