RNA–Protein interactions for RNA: ENST00000435164.6

STRN4-203, Transcript of striatin 4, humanhuman

TSL 2

Gene STRN4, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN4-203ENST00000435164 ILDR2Q71H61 639 aa18.26■□□□□ 0.51
STRN4-203ENST00000435164 TSPYL6Q8N831 410 aa18.26■□□□□ 0.51
STRN4-203ENST00000435164 SLC52A2Q9HAB3 445 aa18.26■□□□□ 0.51
STRN4-203ENST00000435164 BTAF1O14981 1849 aa18.26■□□□□ 0.51
STRN4-203ENST00000435164 BCL11BQ9C0K0 894 aaPredicted RBP18.25■□□□□ 0.51
STRN4-203ENST00000435164 ABCC4O15439 1325 aa18.25■□□□□ 0.51
STRN4-203ENST00000435164 MRC1P22897 1456 aa18.25■□□□□ 0.51
STRN4-203ENST00000435164 SIPA1L3O60292 1781 aaPredicted RBP18.25■□□□□ 0.51
STRN4-203ENST00000435164 KCNQ2O43526 872 aa18.25■□□□□ 0.51
STRN4-203ENST00000435164 SF3B2Q13435 895 aaKnown RBP18.25■□□□□ 0.51
STRN4-203ENST00000435164 C8orf58Q8NAV2 365 aa18.25■□□□□ 0.51
STRN4-203ENST00000435164 SMC5Q8IY18 1101 aa18.24■□□□□ 0.51
STRN4-203ENST00000435164 NFATC2IPQ8NCF5 419 aa18.24■□□□□ 0.51
STRN4-203ENST00000435164 DAXXQ9UER7 740 aaPredicted RBP18.23■□□□□ 0.51
STRN4-203ENST00000435164 TNS1Q9HBL0 1735 aaKnown RBP18.23■□□□□ 0.51
STRN4-203ENST00000435164 ELL2O00472 640 aaPredicted RBP18.22■□□□□ 0.51
STRN4-203ENST00000435164 ZBTB7BO15156 539 aaPredicted RBP18.21■□□□□ 0.51
STRN4-203ENST00000435164 CCDC125Q86Z20 511 aa18.21■□□□□ 0.51
STRN4-203ENST00000435164 PIGBQ92521 554 aa18.21■□□□□ 0.51
STRN4-203ENST00000435164 UPF2Q9HAU5 1272 aaKnown RBP18.21■□□□□ 0.51
STRN4-203ENST00000435164 TAF7Q15545 349 aaPredicted RBP18.21■□□□□ 0.51
STRN4-203ENST00000435164 GCC1Q96CN9 775 aa18.21■□□□□ 0.51
STRN4-203ENST00000435164 BTBD11A6QL63 1104 aa18.2■□□□□ 0.5
STRN4-203ENST00000435164 BABAM1Q9NWV8 329 aa18.2■□□□□ 0.5
STRN4-203ENST00000435164 PTPRCP08575 1304 aa18.2■□□□□ 0.5
STRN4-203ENST00000435164 SOS1Q07889 1333 aaPredicted RBP18.2■□□□□ 0.5
STRN4-203ENST00000435164 APBA3O96018 575 aa18.19■□□□□ 0.5
STRN4-203ENST00000435164 SMARCC1Q92922 1105 aaPredicted RBP18.19■□□□□ 0.5
STRN4-203ENST00000435164 PTF1AQ7RTS3 328 aa18.18■□□□□ 0.5
STRN4-203ENST00000435164 TTC5Q8N0Z6 440 aa18.18■□□□□ 0.5
STRN4-203ENST00000435164 PAPPAQ13219 1627 aa18.17■□□□□ 0.5
STRN4-203ENST00000435164 BAG6P46379 1132 aa18.17■□□□□ 0.5
STRN4-203ENST00000435164 NUCB1Q02818 461 aa18.17■□□□□ 0.5
STRN4-203ENST00000435164 KDM3BQ7LBC6 1761 aa18.17■□□□□ 0.5
STRN4-203ENST00000435164 TSPYL4Q9UJ04 414 aa18.17■□□□□ 0.5
STRN4-203ENST00000435164 INTS3Q68E01 1043 aaKnown RBP18.16■□□□□ 0.5
STRN4-203ENST00000435164 ASAP1Q9ULH1 1129 aa18.16■□□□□ 0.5
STRN4-203ENST00000435164 RGPD3A6NKT7 1758 aaPredicted RBP18.15■□□□□ 0.5
STRN4-203ENST00000435164 RGPD4Q7Z3J3 1758 aa18.15■□□□□ 0.5
STRN4-203ENST00000435164 PALLDQ8WX93 1383 aa18.15■□□□□ 0.5
STRN4-203ENST00000435164 SLC39A6Q13433 755 aa18.15■□□□□ 0.5
STRN4-203ENST00000435164 ZNF790Q6PG37 636 aa18.15■□□□□ 0.5
STRN4-203ENST00000435164 UPF1Q92900 1129 aaKnown RBP eCLIP18.15■□□□□ 0.5
STRN4-203ENST00000435164 ATG3Q9NT62 314 aa18.15■□□□□ 0.5
STRN4-203ENST00000435164 LY75O60449 1722 aa18.15■□□□□ 0.5
STRN4-203ENST00000435164 UBR2Q8IWV8 1755 aa18.14■□□□□ 0.49
STRN4-203ENST00000435164 PLSCR1O15162 318 aa18.14■□□□□ 0.49
STRN4-203ENST00000435164 MIS18AQ9NYP9 233 aa18.14■□□□□ 0.49
STRN4-203ENST00000435164 RBM42Q9BTD8 480 aaKnown RBP18.13■□□□□ 0.49
STRN4-203ENST00000435164 PTCD1O75127 700 aaKnown RBP18.12■□□□□ 0.49
STRN4-203ENST00000435164 CHD1LQ86WJ1 897 aa18.12■□□□□ 0.49
STRN4-203ENST00000435164 FMNL2Q96PY5 1086 aa18.12■□□□□ 0.49
STRN4-203ENST00000435164 CHMP4AQ9BY43 222 aa18.12■□□□□ 0.49
STRN4-203ENST00000435164 BECN1Q14457 450 aa18.11■□□□□ 0.49
STRN4-203ENST00000435164 EN1Q05925 392 aaPredicted RBP18.1■□□□□ 0.49
STRN4-203ENST00000435164 RTL5Q5HYW3 569 aaPredicted RBP18.1■□□□□ 0.49
STRN4-203ENST00000435164 STK31Q9BXU1 1019 aa18.1■□□□□ 0.49
STRN4-203ENST00000435164 KCPQ6ZWJ8 1503 aa18.1■□□□□ 0.49
STRN4-203ENST00000435164 LOC102724428A0A0B4J2F2 783 aa18.09■□□□□ 0.49
STRN4-203ENST00000435164 EIF5BO60841 1220 aaKnown RBP18.09■□□□□ 0.49
STRN4-203ENST00000435164 SLC4A2P04920 1241 aa18.09■□□□□ 0.49
STRN4-203ENST00000435164 HMGB2P26583 209 aaKnown RBP18.09■□□□□ 0.49
STRN4-203ENST00000435164 SIK1P57059 783 aa18.09■□□□□ 0.49
STRN4-203ENST00000435164 RPAP2Q8IXW5 612 aaPredicted RBP18.09■□□□□ 0.49
STRN4-203ENST00000435164 ZNF831Q5JPB2 1677 aa18.09■□□□□ 0.49
STRN4-203ENST00000435164 KCNQ3O43525 872 aa18.08■□□□□ 0.49
STRN4-203ENST00000435164 SLC27A3Q5K4L6 730 aa18.08■□□□□ 0.49
STRN4-203ENST00000435164 CCDC30Q5VVM6 783 aa18.08■□□□□ 0.49
STRN4-203ENST00000435164 DEFB132Q7Z7B7 95 aa18.08■□□□□ 0.49
STRN4-203ENST00000435164 ZNF496Q96IT1 587 aaPredicted RBP18.08■□□□□ 0.49
STRN4-203ENST00000435164 CCNL1Q9UK58 526 aaPredicted RBP18.08■□□□□ 0.49
STRN4-203ENST00000435164 ATP6V1AP38606 617 aa18.08■□□□□ 0.48
STRN4-203ENST00000435164 CCT4P50991 539 aaKnown RBP18.08■□□□□ 0.48
STRN4-203ENST00000435164 TXNRD1Q16881 649 aa18.08■□□□□ 0.48
STRN4-203ENST00000435164 KRT24Q2M2I5 525 aa18.08■□□□□ 0.48
STRN4-203ENST00000435164 HEG1Q9ULI3 1381 aa18.08■□□□□ 0.48
STRN4-203ENST00000435164 TAF1LQ8IZX4 1826 aa18.07■□□□□ 0.48
STRN4-203ENST00000435164 EIF4A1P60842 406 aaKnown RBP18.07■□□□□ 0.48
STRN4-203ENST00000435164 EZH2Q15910 746 aaKnown RBP18.07■□□□□ 0.48
STRN4-203ENST00000435164 ANKRD45Q5TZF3 282 aa18.07■□□□□ 0.48
STRN4-203ENST00000435164 VSIG10Q8N0Z9 540 aa18.07■□□□□ 0.48
STRN4-203ENST00000435164 CAMKK2Q96RR4 588 aa18.07■□□□□ 0.48
STRN4-203ENST00000435164 RREB1Q92766 1687 aa18.06■□□□□ 0.48
STRN4-203ENST00000435164 SEC24BO95487 1268 aa18.06■□□□□ 0.48
STRN4-203ENST00000435164 TBC1D32Q96NH3 1257 aa18.06■□□□□ 0.48
STRN4-203ENST00000435164 C5P01031 1676 aa18.05■□□□□ 0.48
STRN4-203ENST00000435164 SNRPA1P09661 255 aaKnown RBP18.05■□□□□ 0.48
STRN4-203ENST00000435164 TEX13AQ9BXU3 409 aaPredicted RBP18.05■□□□□ 0.48
STRN4-203ENST00000435164 LNPKQ9C0E8 428 aa18.05■□□□□ 0.48
STRN4-203ENST00000435164 C1orf115Q9H7X2 142 aa18.05■□□□□ 0.48
STRN4-203ENST00000435164 TJP1Q07157 1748 aa18.05■□□□□ 0.48
STRN4-203ENST00000435164 CICQ96RK0 1608 aaPredicted RBP18.05■□□□□ 0.48
STRN4-203ENST00000435164 NBR1Q14596 966 aa18.04■□□□□ 0.48
STRN4-203ENST00000435164 BMP2KLQ5H9B9 411 aa18.04■□□□□ 0.48
STRN4-203ENST00000435164 ANKRD44Q8N8A2 993 aa18.04■□□□□ 0.48
STRN4-203ENST00000435164 LAMB4A4D0S4 1761 aa18.04■□□□□ 0.48
STRN4-203ENST00000435164 DCTPP1Q9H773 170 aa18.04■□□□□ 0.48
STRN4-203ENST00000435164 COL5A3P25940 1745 aaPredicted RBP18.03■□□□□ 0.48
STRN4-203ENST00000435164 CACNA1FO60840 1977 aa18.03■□□□□ 0.48
STRN4-203ENST00000435164 HMMRO75330 724 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 207.6 ms