RNA–Protein interactions for RNA: ENST00000435083.5

CHRNA1-207, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3

Gene CHRNA1, Length 1,596 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-207ENST00000435083 CYP19A1P11511 503 aaPredicted RBP15.79■□□□□ 0.12
CHRNA1-207ENST00000435083 SBF1O95248 1867 aa15.79■□□□□ 0.12
CHRNA1-207ENST00000435083 RNMTO43148 476 aaKnown RBP15.79■□□□□ 0.12
CHRNA1-207ENST00000435083 NFIXQ14938 502 aa15.79■□□□□ 0.12
CHRNA1-207ENST00000435083 KLRG1Q96E93 195 aa15.79■□□□□ 0.12
CHRNA1-207ENST00000435083 HMOX1P09601 288 aa15.78■□□□□ 0.12
CHRNA1-207ENST00000435083 RASSF7Q02833 373 aa15.78■□□□□ 0.12
CHRNA1-207ENST00000435083 NARFQ9UHQ1 456 aa15.78■□□□□ 0.12
CHRNA1-207ENST00000435083 AFDNP55196 1824 aaKnown RBP15.77■□□□□ 0.12
CHRNA1-207ENST00000435083 ZBTB1Q9Y2K1 713 aa15.77■□□□□ 0.11
CHRNA1-207ENST00000435083 TNRC6CQ9HCJ0 1690 aaKnown RBP15.77■□□□□ 0.11
CHRNA1-207ENST00000435083 COL15A1P39059 1388 aa15.76■□□□□ 0.11
CHRNA1-207ENST00000435083 SERPINB2P05120 415 aa15.76■□□□□ 0.11
CHRNA1-207ENST00000435083 VIRMAQ69YN4 1812 aaKnown RBP15.76■□□□□ 0.11
CHRNA1-207ENST00000435083 SMC1BQ8NDV3 1235 aa15.75■□□□□ 0.11
CHRNA1-207ENST00000435083 LMNB1P20700 586 aa15.75■□□□□ 0.11
CHRNA1-207ENST00000435083 CANXP27824 592 aaKnown RBP15.75■□□□□ 0.11
CHRNA1-207ENST00000435083 MTHFSDQ2M296 383 aaKnown RBP15.75■□□□□ 0.11
CHRNA1-207ENST00000435083 TTLL6Q8N841 843 aa15.75■□□□□ 0.11
CHRNA1-207ENST00000435083 JMYQ8N9B5 988 aa15.75■□□□□ 0.11
CHRNA1-207ENST00000435083 BCL2L12Q9HB09 334 aa15.75■□□□□ 0.11
CHRNA1-207ENST00000435083 MRC1P22897 1456 aa15.74■□□□□ 0.11
CHRNA1-207ENST00000435083 BICDL1Q6ZP65 573 aa15.74■□□□□ 0.11
CHRNA1-207ENST00000435083 C2CD5Q86YS7 1000 aa15.74■□□□□ 0.11
CHRNA1-207ENST00000435083 NRXN2Q9P2S2 1712 aa15.73■□□□□ 0.11
CHRNA1-207ENST00000435083 AMER1Q5JTC6 1135 aaPredicted RBP15.73■□□□□ 0.11
CHRNA1-207ENST00000435083 ZC3H4Q9UPT8 1303 aaKnown RBP15.73■□□□□ 0.11
CHRNA1-207ENST00000435083 GLTPD2A6NH11 291 aa15.72■□□□□ 0.11
CHRNA1-207ENST00000435083 H0YIN7 160 aa15.72■□□□□ 0.11
CHRNA1-207ENST00000435083 VEGFAP15692 232 aaPredicted RBP15.72■□□□□ 0.11
CHRNA1-207ENST00000435083 PRELPP51888 382 aa15.72■□□□□ 0.11
CHRNA1-207ENST00000435083 VSIG10Q8N0Z9 540 aa15.72■□□□□ 0.11
CHRNA1-207ENST00000435083 COL13A1Q5TAT6 717 aaPredicted RBP15.71■□□□□ 0.11
CHRNA1-207ENST00000435083 TTC5Q8N0Z6 440 aa15.71■□□□□ 0.11
CHRNA1-207ENST00000435083 DLEC1Q9Y238 1755 aa15.71■□□□□ 0.11
CHRNA1-207ENST00000435083 CCDC88AQ3V6T2 1871 aa15.71■□□□□ 0.11
CHRNA1-207ENST00000435083 DIAPH1O60610 1272 aaKnown RBP15.7■□□□□ 0.1
CHRNA1-207ENST00000435083 STARD3NLO95772 234 aa15.7■□□□□ 0.1
CHRNA1-207ENST00000435083 CARMIL3Q8ND23 1372 aa15.7■□□□□ 0.1
CHRNA1-207ENST00000435083 A0A087WZG4 1122 aa15.69■□□□□ 0.1
CHRNA1-207ENST00000435083 NFKBIEO00221 500 aa15.69■□□□□ 0.1
CHRNA1-207ENST00000435083 EIF5P55010 431 aaKnown RBP15.69■□□□□ 0.1
CHRNA1-207ENST00000435083 ZNF622Q969S3 477 aaKnown RBP eCLIP15.69■□□□□ 0.1
CHRNA1-207ENST00000435083 ZNF219Q9P2Y4 722 aaPredicted RBP15.69■□□□□ 0.1
CHRNA1-207ENST00000435083 ZNF330Q9Y3S2 320 aaPredicted RBP15.69■□□□□ 0.1
CHRNA1-207ENST00000435083 UBR2Q8IWV8 1755 aa15.68■□□□□ 0.1
CHRNA1-207ENST00000435083 TIAM2Q8IVF5 1701 aa15.68■□□□□ 0.1
CHRNA1-207ENST00000435083 CC2D1BQ5T0F9 858 aaKnown RBP15.68■□□□□ 0.1
CHRNA1-207ENST00000435083 TBC1D9BQ66K14 1250 aa15.68■□□□□ 0.1
CHRNA1-207ENST00000435083 CAPN15O75808 1086 aa15.67■□□□□ 0.1
CHRNA1-207ENST00000435083 TEFQ10587 303 aa15.67■□□□□ 0.1
CHRNA1-207ENST00000435083 DPY19L2Q6NUT2 758 aa15.67■□□□□ 0.1
CHRNA1-207ENST00000435083 CCDC24Q8N4L8 307 aa15.67■□□□□ 0.1
CHRNA1-207ENST00000435083 C21orf2O43822 256 aa15.66■□□□□ 0.1
CHRNA1-207ENST00000435083 CNGB1Q14028 1251 aaPredicted RBP15.66■□□□□ 0.1
CHRNA1-207ENST00000435083 CCER1Q8TC90 406 aaPredicted RBP15.66■□□□□ 0.1
CHRNA1-207ENST00000435083 ZNF496Q96IT1 587 aaPredicted RBP15.66■□□□□ 0.1
CHRNA1-207ENST00000435083 TBC1D2BQ9UPU7 963 aa15.66■□□□□ 0.1
CHRNA1-207ENST00000435083 KIF7Q2M1P5 1343 aa15.66■□□□□ 0.1
CHRNA1-207ENST00000435083 U2SURPO15042 1029 aaKnown RBP15.66■□□□□ 0.1
CHRNA1-207ENST00000435083 PDE6BP35913 854 aa15.66■□□□□ 0.1
CHRNA1-207ENST00000435083 TNS4Q8IZW8 715 aa15.66■□□□□ 0.1
CHRNA1-207ENST00000435083 BRIP1Q9BX63 1249 aa15.66■□□□□ 0.1
CHRNA1-207ENST00000435083 TEX13AQ9BXU3 409 aaPredicted RBP15.66■□□□□ 0.1
CHRNA1-207ENST00000435083 HEG1Q9ULI3 1381 aa15.65■□□□□ 0.1
CHRNA1-207ENST00000435083 ANKRD31Q8N7Z5 1873 aa15.65■□□□□ 0.1
CHRNA1-207ENST00000435083 GNAT3A8MTJ3 354 aa15.65■□□□□ 0.1
CHRNA1-207ENST00000435083 NPHP1O15259 732 aa15.65■□□□□ 0.1
CHRNA1-207ENST00000435083 PRR5LQ6MZQ0 368 aa15.65■□□□□ 0.1
CHRNA1-207ENST00000435083 ZNF790Q6PG37 636 aa15.65■□□□□ 0.1
CHRNA1-207ENST00000435083 NPM2Q86SE8 214 aaKnown RBP15.65■□□□□ 0.1
CHRNA1-207ENST00000435083 IL17REQ8NFR9 667 aa15.65■□□□□ 0.1
CHRNA1-207ENST00000435083 PDZRN3Q9UPQ7 1066 aa15.65■□□□□ 0.1
CHRNA1-207ENST00000435083 POTECB2RU33 542 aa15.64■□□□□ 0.09
CHRNA1-207ENST00000435083 PER1O15534 1290 aaPredicted RBP15.64■□□□□ 0.09
CHRNA1-207ENST00000435083 ERFEQ4G0M1 354 aa15.64■□□□□ 0.09
CHRNA1-207ENST00000435083 A1BGP04217 495 aa15.63■□□□□ 0.09
CHRNA1-207ENST00000435083 HSPA1AP0DMV8 641 aaKnown RBP15.63■□□□□ 0.09
CHRNA1-207ENST00000435083 HSPA1BP0DMV9 641 aaKnown RBP15.63■□□□□ 0.09
CHRNA1-207ENST00000435083 GAS2L2Q8NHY3 880 aa15.63■□□□□ 0.09
CHRNA1-207ENST00000435083 IL6STP40189 918 aaPredicted RBP15.62■□□□□ 0.09
CHRNA1-207ENST00000435083 FMNL2Q96PY5 1086 aa15.62■□□□□ 0.09
CHRNA1-207ENST00000435083 SETDB2Q96T68 719 aa15.62■□□□□ 0.09
CHRNA1-207ENST00000435083 SCN7AQ01118 1682 aa15.62■□□□□ 0.09
CHRNA1-207ENST00000435083 COL11A2P13942 1736 aaPredicted RBP15.62■□□□□ 0.09
CHRNA1-207ENST00000435083 CNBD1Q8NA66 436 aa15.62■□□□□ 0.09
CHRNA1-207ENST00000435083 DICER1Q9UPY3 1922 aaKnown RBP15.61■□□□□ 0.09
CHRNA1-207ENST00000435083 FER1L6Q2WGJ9 1857 aa15.61■□□□□ 0.09
CHRNA1-207ENST00000435083 SIPA1L3O60292 1781 aaPredicted RBP15.6■□□□□ 0.09
CHRNA1-207ENST00000435083 CAMTA2O94983 1202 aa15.6■□□□□ 0.09
CHRNA1-207ENST00000435083 ST5P78524 1137 aa15.6■□□□□ 0.09
CHRNA1-207ENST00000435083 CNKSR1Q969H4 720 aa15.6■□□□□ 0.09
CHRNA1-207ENST00000435083 TAOK3Q9H2K8 898 aa15.6■□□□□ 0.09
CHRNA1-207ENST00000435083 CACNA1SQ13698 1873 aa15.6■□□□□ 0.09
CHRNA1-207ENST00000435083 KCNQ3O43525 872 aa15.59■□□□□ 0.09
CHRNA1-207ENST00000435083 DDNO94850 711 aaPredicted RBP15.59■□□□□ 0.09
CHRNA1-207ENST00000435083 STYK1Q6J9G0 422 aa15.59■□□□□ 0.09
CHRNA1-207ENST00000435083 DZIP3Q86Y13 1208 aaKnown RBP15.59■□□□□ 0.09
CHRNA1-207ENST00000435083 COL3A1P02461 1466 aaPredicted RBP15.59■□□□□ 0.09
CHRNA1-207ENST00000435083 LTBP3Q9NS15 1303 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms