RNA–Protein interactions for RNA: ENST00000434342.5

SEMA3F-206, Transcript of semaphorin 3F, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEMA3F, Length 3,541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-206ENST00000434342 CHMP4CQ96CF2 233 aa14.82□□□□□ -0.04
SEMA3F-206ENST00000434342 SURF6O75683 361 aaKnown RBP14.82□□□□□ -0.04
SEMA3F-206ENST00000434342 NUCB2P80303 420 aa14.82□□□□□ -0.04
SEMA3F-206ENST00000434342 CEP170BQ9Y4F5 1589 aaPredicted RBP14.82□□□□□ -0.04
SEMA3F-206ENST00000434342 KDRP35968 1356 aa14.82□□□□□ -0.04
SEMA3F-206ENST00000434342 KCNJ4P48050 445 aa14.82□□□□□ -0.04
SEMA3F-206ENST00000434342 USP44Q9H0E7 712 aa14.82□□□□□ -0.04
SEMA3F-206ENST00000434342 LGR6Q9HBX8 967 aa14.82□□□□□ -0.04
SEMA3F-206ENST00000434342 PEAK1Q9H792 1746 aa14.81□□□□□ -0.04
SEMA3F-206ENST00000434342 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.81□□□□□ -0.04
SEMA3F-206ENST00000434342 PSME1Q06323 249 aa14.81□□□□□ -0.04
SEMA3F-206ENST00000434342 HTATSF1O43719 755 aaKnown RBP14.8□□□□□ -0.04
SEMA3F-206ENST00000434342 ESCO1Q5FWF5 840 aa14.8□□□□□ -0.04
SEMA3F-206ENST00000434342 PRPF40AO75400 957 aaKnown RBP14.8□□□□□ -0.04
SEMA3F-206ENST00000434342 LETM1O95202 739 aaPredicted RBP14.8□□□□□ -0.04
SEMA3F-206ENST00000434342 FOXD4L6Q3SYB3 417 aaPredicted RBP14.8□□□□□ -0.04
SEMA3F-206ENST00000434342 CAVIN1Q6NZI2 390 aaKnown RBP14.8□□□□□ -0.04
SEMA3F-206ENST00000434342 FOXD4L3Q6VB84 417 aaPredicted RBP14.8□□□□□ -0.04
SEMA3F-206ENST00000434342 PHF8Q9UPP1 1060 aa14.8□□□□□ -0.04
SEMA3F-206ENST00000434342 UNC5CLQ8IV45 518 aa14.8□□□□□ -0.04
SEMA3F-206ENST00000434342 MAP3K5Q99683 1374 aa14.79□□□□□ -0.04
SEMA3F-206ENST00000434342 AKAP12Q02952 1782 aa14.79□□□□□ -0.04
SEMA3F-206ENST00000434342 TRERF1Q96PN7 1200 aa14.79□□□□□ -0.04
SEMA3F-206ENST00000434342 GTPBP4Q9BZE4 634 aaKnown RBP14.79□□□□□ -0.04
SEMA3F-206ENST00000434342 UPF3BQ9BZI7 483 aaKnown RBP14.79□□□□□ -0.04
SEMA3F-206ENST00000434342 KCNQ3O43525 872 aa14.79□□□□□ -0.04
SEMA3F-206ENST00000434342 PTMSP20962 102 aa14.79□□□□□ -0.04
SEMA3F-206ENST00000434342 NBPF6Q5VWK0 638 aa14.79□□□□□ -0.04
SEMA3F-206ENST00000434342 LRRC59Q96AG4 307 aaKnown RBP14.79□□□□□ -0.04
SEMA3F-206ENST00000434342 NBPF4Q96M43 638 aa14.79□□□□□ -0.04
SEMA3F-206ENST00000434342 ESYT1Q9BSJ8 1104 aa14.79□□□□□ -0.04
SEMA3F-206ENST00000434342 OSBPL3Q9H4L5 887 aa14.79□□□□□ -0.04
SEMA3F-206ENST00000434342 UBR1Q8IWV7 1749 aa14.79□□□□□ -0.04
SEMA3F-206ENST00000434342 PPP1R42Q7Z4L9 355 aa14.79□□□□□ -0.04
SEMA3F-206ENST00000434342 SRCIN1Q9C0H9 1055 aa14.79□□□□□ -0.04
SEMA3F-206ENST00000434342 PALD1Q9ULE6 856 aa14.79□□□□□ -0.04
SEMA3F-206ENST00000434342 SRGAP3O43295 1099 aa14.78□□□□□ -0.04
SEMA3F-206ENST00000434342 TEFQ10587 303 aa14.78□□□□□ -0.04
SEMA3F-206ENST00000434342 MPRIPQ6WCQ1 1025 aa14.78□□□□□ -0.04
SEMA3F-206ENST00000434342 MCCP23508 829 aa14.78□□□□□ -0.04
SEMA3F-206ENST00000434342 PI4KAP2A4QPH2 592 aa14.78□□□□□ -0.04
SEMA3F-206ENST00000434342 TRHP20396 242 aaPredicted RBP14.78□□□□□ -0.04
SEMA3F-206ENST00000434342 PI4KAP1Q8N8J0 262 aa14.78□□□□□ -0.04
SEMA3F-206ENST00000434342 CHPF2Q9P2E5 772 aa14.78□□□□□ -0.04
SEMA3F-206ENST00000434342 NBPF7P0C2Y1 421 aaPredicted RBP14.77□□□□□ -0.04
SEMA3F-206ENST00000434342 CHMLP26374 656 aa14.77□□□□□ -0.04
SEMA3F-206ENST00000434342 OS9Q13438 667 aaPredicted RBP14.77□□□□□ -0.04
SEMA3F-206ENST00000434342 CWC22Q9HCG8 908 aaKnown RBP14.77□□□□□ -0.04
SEMA3F-206ENST00000434342 NRKQ7Z2Y5 1582 aa14.77□□□□□ -0.05
SEMA3F-206ENST00000434342 RIMS1Q86UR5 1692 aaKnown RBP14.77□□□□□ -0.05
SEMA3F-206ENST00000434342 TERF1P54274 439 aa14.77□□□□□ -0.05
SEMA3F-206ENST00000434342 IRX3P78415 501 aaPredicted RBP14.77□□□□□ -0.05
SEMA3F-206ENST00000434342 KLHL40Q2TBA0 621 aa14.77□□□□□ -0.05
SEMA3F-206ENST00000434342 TPRNQ4KMQ1 711 aa14.77□□□□□ -0.05
SEMA3F-206ENST00000434342 TMX3Q96JJ7 454 aa14.77□□□□□ -0.05
SEMA3F-206ENST00000434342 IRX5P78411 483 aaPredicted RBP14.76□□□□□ -0.05
SEMA3F-206ENST00000434342 ZNF530Q6P9A1 599 aaPredicted RBP14.76□□□□□ -0.05
SEMA3F-206ENST00000434342 SASS6Q6UVJ0 657 aa14.76□□□□□ -0.05
SEMA3F-206ENST00000434342 ISY1Q9ULR0 285 aaKnown RBP14.75□□□□□ -0.05
SEMA3F-206ENST00000434342 IBTKQ9P2D0 1353 aaPredicted RBP14.75□□□□□ -0.05
SEMA3F-206ENST00000434342 RBM27Q9P2N5 1060 aaKnown RBP14.75□□□□□ -0.05
SEMA3F-206ENST00000434342 BTBD11A6QL63 1104 aa14.74□□□□□ -0.05
SEMA3F-206ENST00000434342 IP6K1Q92551 441 aa14.74□□□□□ -0.05
SEMA3F-206ENST00000434342 LMBRD1Q9NUN5 540 aa14.74□□□□□ -0.05
SEMA3F-206ENST00000434342 ZDHHC9Q9Y397 364 aa14.74□□□□□ -0.05
SEMA3F-206ENST00000434342 RHPN1Q8TCX5 695 aa14.74□□□□□ -0.05
SEMA3F-206ENST00000434342 PPP1R9BQ96SB3 815 aa14.74□□□□□ -0.05
SEMA3F-206ENST00000434342 EIF4A1P60842 406 aaKnown RBP14.73□□□□□ -0.05
SEMA3F-206ENST00000434342 LARP6Q9BRS8 491 aaKnown RBP14.73□□□□□ -0.05
SEMA3F-206ENST00000434342 IL25Q9H293 177 aa14.73□□□□□ -0.05
SEMA3F-206ENST00000434342 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.73□□□□□ -0.05
SEMA3F-206ENST00000434342 SOS1Q07889 1333 aaPredicted RBP14.73□□□□□ -0.05
SEMA3F-206ENST00000434342 DNAAF4Q8WXU2 420 aa14.73□□□□□ -0.05
SEMA3F-206ENST00000434342 DIP2AQ14689 1571 aa14.73□□□□□ -0.05
SEMA3F-206ENST00000434342 SALL3Q9BXA9 1300 aa14.73□□□□□ -0.05
SEMA3F-206ENST00000434342 CYP2E1P05181 493 aaPredicted RBP14.72□□□□□ -0.05
SEMA3F-206ENST00000434342 ZNF710Q8N1W2 664 aa14.72□□□□□ -0.05
SEMA3F-206ENST00000434342 CLEC17AQ6ZS10 378 aa14.72□□□□□ -0.05
SEMA3F-206ENST00000434342 SSH3Q8TE77 659 aa14.72□□□□□ -0.05
SEMA3F-206ENST00000434342 U2AF2P26368 475 aaKnown RBP eCLIP14.71□□□□□ -0.05
SEMA3F-206ENST00000434342 C9orf78Q9NZ63 289 aaPredicted RBP14.71□□□□□ -0.05
SEMA3F-206ENST00000434342 AK9Q5TCS8 1911 aa14.71□□□□□ -0.05
SEMA3F-206ENST00000434342 ZSCAN23Q3MJ62 389 aa14.71□□□□□ -0.05
SEMA3F-206ENST00000434342 C1orf141Q5JVX7 400 aa14.71□□□□□ -0.05
SEMA3F-206ENST00000434342 ANKLE2Q86XL3 938 aa14.71□□□□□ -0.05
SEMA3F-206ENST00000434342 PTMAP06454 111 aaKnown RBP14.71□□□□□ -0.06
SEMA3F-206ENST00000434342 AIMP1Q12904 312 aaKnown RBP14.71□□□□□ -0.06
SEMA3F-206ENST00000434342 CWC27Q6UX04 472 aaKnown RBP14.71□□□□□ -0.06
SEMA3F-206ENST00000434342 TEX2Q8IWB9 1127 aa14.71□□□□□ -0.06
SEMA3F-206ENST00000434342 ORAI2Q96SN7 254 aa14.71□□□□□ -0.06
SEMA3F-206ENST00000434342 STAP2Q9UGK3 403 aa14.71□□□□□ -0.06
SEMA3F-206ENST00000434342 NOL7Q9UMY1 257 aaKnown RBP14.71□□□□□ -0.06
SEMA3F-206ENST00000434342 BRD2P25440 801 aaKnown RBP14.7□□□□□ -0.06
SEMA3F-206ENST00000434342 DTNBO60941 627 aa14.7□□□□□ -0.06
SEMA3F-206ENST00000434342 PLEKHO1Q53GL0 409 aaPredicted RBP14.7□□□□□ -0.06
SEMA3F-206ENST00000434342 SETD1BQ9UPS6 1966 aaKnown RBP14.7□□□□□ -0.06
SEMA3F-206ENST00000434342 KIF1BPQ96EK5 621 aa14.7□□□□□ -0.06
SEMA3F-206ENST00000434342 SPG7Q9UQ90 795 aa14.7□□□□□ -0.06
SEMA3F-206ENST00000434342 PRAMEF22A3QJZ6 481 aa14.69□□□□□ -0.06
SEMA3F-206ENST00000434342 BEND3Q5T5X7 828 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms