RNA–Protein interactions for RNA: ENST00000434030.1

SEMA3B-205, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 1,011 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-205ENST00000434030 KIAA1551Q9HCM1 1747 aa29.42■■■□□ 2.3
SEMA3B-205ENST00000434030 STARD3NLO95772 234 aa29.42■■■□□ 2.3
SEMA3B-205ENST00000434030 NEFMP07197 916 aa29.42■■■□□ 2.3
SEMA3B-205ENST00000434030 FMNL2Q96PY5 1086 aa29.42■■■□□ 2.3
SEMA3B-205ENST00000434030 PARP3Q9Y6F1 533 aa29.42■■■□□ 2.3
SEMA3B-205ENST00000434030 GRIN3BO60391 1043 aa29.41■■■□□ 2.3
SEMA3B-205ENST00000434030 TEX13AQ9BXU3 409 aaPredicted RBP29.41■■■□□ 2.3
SEMA3B-205ENST00000434030 COL15A1P39059 1388 aa29.4■■■□□ 2.3
SEMA3B-205ENST00000434030 ZPR1O75312 459 aa29.4■■■□□ 2.3
SEMA3B-205ENST00000434030 CANXP27824 592 aaKnown RBP29.4■■■□□ 2.3
SEMA3B-205ENST00000434030 USPL1Q5W0Q7 1092 aa29.39■■■□□ 2.3
SEMA3B-205ENST00000434030 PNNQ9H307 717 aaKnown RBP29.38■■■□□ 2.29
SEMA3B-205ENST00000434030 NARFQ9UHQ1 456 aa29.38■■■□□ 2.29
SEMA3B-205ENST00000434030 C10orf71Q711Q0 1435 aa29.37■■■□□ 2.29
SEMA3B-205ENST00000434030 AFDNP55196 1824 aaKnown RBP29.37■■■□□ 2.29
SEMA3B-205ENST00000434030 TM4SF1P30408 202 aa29.36■■■□□ 2.29
SEMA3B-205ENST00000434030 EIF5P55010 431 aaKnown RBP29.36■■■□□ 2.29
SEMA3B-205ENST00000434030 TGFB2P61812 414 aa29.36■■■□□ 2.29
SEMA3B-205ENST00000434030 MYBBP1AQ9BQG0 1328 aaKnown RBP29.36■■■□□ 2.29
SEMA3B-205ENST00000434030 DDR1Q08345 913 aa29.35■■■□□ 2.29
SEMA3B-205ENST00000434030 WWC3Q9ULE0 1092 aa29.35■■■□□ 2.29
SEMA3B-205ENST00000434030 BRCA1P38398 1863 aaKnown RBP29.35■■■□□ 2.29
SEMA3B-205ENST00000434030 PXDNLA1KZ92 1463 aa29.35■■■□□ 2.29
SEMA3B-205ENST00000434030 TAF7Q15545 349 aaPredicted RBP29.34■■■□□ 2.29
SEMA3B-205ENST00000434030 NFE2L2Q16236 605 aa29.34■■■□□ 2.29
SEMA3B-205ENST00000434030 ZNF784Q8NCA9 323 aaPredicted RBP29.34■■■□□ 2.29
SEMA3B-205ENST00000434030 BCL2L12Q9HB09 334 aa29.32■■■□□ 2.28
SEMA3B-205ENST00000434030 USP16Q9Y5T5 823 aa29.32■■■□□ 2.28
SEMA3B-205ENST00000434030 MAPK8IP3Q9UPT6 1336 aa29.31■■■□□ 2.28
SEMA3B-205ENST00000434030 A0A0G2JLW4 131 aa29.31■■■□□ 2.28
SEMA3B-205ENST00000434030 POLRMTO00411 1230 aaKnown RBP29.31■■■□□ 2.28
SEMA3B-205ENST00000434030 A1BGP04217 495 aa29.31■■■□□ 2.28
SEMA3B-205ENST00000434030 ZEB1P37275 1124 aaPredicted RBP29.31■■■□□ 2.28
SEMA3B-205ENST00000434030 KDM3BQ7LBC6 1761 aa29.31■■■□□ 2.28
SEMA3B-205ENST00000434030 NRXN2Q9P2S2 1712 aa29.29■■■□□ 2.28
SEMA3B-205ENST00000434030 A0A087WZG4 1122 aa29.29■■■□□ 2.28
SEMA3B-205ENST00000434030 PRAMEF22A3QJZ6 481 aa29.29■■■□□ 2.28
SEMA3B-205ENST00000434030 IL6STP40189 918 aaPredicted RBP29.29■■■□□ 2.28
SEMA3B-205ENST00000434030 NFIXQ14938 502 aa29.29■■■□□ 2.28
SEMA3B-205ENST00000434030 MIS18AQ9NYP9 233 aa29.29■■■□□ 2.28
SEMA3B-205ENST00000434030 SNRPA1P09661 255 aaKnown RBP29.28■■■□□ 2.28
SEMA3B-205ENST00000434030 DPEP1P16444 411 aa29.27■■■□□ 2.28
SEMA3B-205ENST00000434030 ZNF330Q9Y3S2 320 aaPredicted RBP29.27■■■□□ 2.28
SEMA3B-205ENST00000434030 SCN7AQ01118 1682 aa29.27■■■□□ 2.28
SEMA3B-205ENST00000434030 THUMPD2Q9BTF0 503 aaKnown RBP29.25■■■□□ 2.27
SEMA3B-205ENST00000434030 PRKRIP1Q9H875 184 aaPredicted RBP29.25■■■□□ 2.27
SEMA3B-205ENST00000434030 TBC1D2BQ9UPU7 963 aa29.25■■■□□ 2.27
SEMA3B-205ENST00000434030 KCNA3P22001 575 aa29.24■■■□□ 2.27
SEMA3B-205ENST00000434030 PNISRQ8TF01 805 aaKnown RBP29.24■■■□□ 2.27
SEMA3B-205ENST00000434030 ARFGEF1Q9Y6D6 1849 aa29.24■■■□□ 2.27
SEMA3B-205ENST00000434030 LAMB4A4D0S4 1761 aa29.24■■■□□ 2.27
SEMA3B-205ENST00000434030 BCORQ6W2J9 1755 aa29.23■■■□□ 2.27
SEMA3B-205ENST00000434030 PIP4K2AP48426 406 aaPredicted RBP29.22■■■□□ 2.27
SEMA3B-205ENST00000434030 NPM2Q86SE8 214 aaKnown RBP29.22■■■□□ 2.27
SEMA3B-205ENST00000434030 BCS1LQ9Y276 419 aa29.22■■■□□ 2.27
SEMA3B-205ENST00000434030 SERPINB2P05120 415 aa29.21■■■□□ 2.27
SEMA3B-205ENST00000434030 RIPK4P57078 832 aa29.21■■■□□ 2.27
SEMA3B-205ENST00000434030 TMPOP42166 694 aaKnown RBP29.2■■■□□ 2.26
SEMA3B-205ENST00000434030 BICDL1Q6ZP65 573 aa29.2■■■□□ 2.26
SEMA3B-205ENST00000434030 TBC1D9BQ66K14 1250 aa29.19■■■□□ 2.26
SEMA3B-205ENST00000434030 CAMTA2O94983 1202 aa29.18■■■□□ 2.26
SEMA3B-205ENST00000434030 PIM2Q9P1W9 311 aa29.18■■■□□ 2.26
SEMA3B-205ENST00000434030 EIF4A1P60842 406 aaKnown RBP29.17■■■□□ 2.26
SEMA3B-205ENST00000434030 WDR43Q15061 677 aaKnown RBP eCLIP29.17■■■□□ 2.26
SEMA3B-205ENST00000434030 DZIP3Q86Y13 1208 aaKnown RBP29.17■■■□□ 2.26
SEMA3B-205ENST00000434030 CCDC146Q8IYE0 955 aa29.17■■■□□ 2.26
SEMA3B-205ENST00000434030 NBPF26B4DH59 902 aa29.16■■■□□ 2.26
SEMA3B-205ENST00000434030 CHRNA5P30532 468 aa29.16■■■□□ 2.26
SEMA3B-205ENST00000434030 NBPF10Q6P3W6 841 aaKnown RBP29.16■■■□□ 2.26
SEMA3B-205ENST00000434030 NBPF15Q8N660 670 aa29.16■■■□□ 2.26
SEMA3B-205ENST00000434030 DLEC1Q9Y238 1755 aa29.16■■■□□ 2.26
SEMA3B-205ENST00000434030 ANKRD31Q8N7Z5 1873 aa29.15■■■□□ 2.26
SEMA3B-205ENST00000434030 GIGYF1O75420 1035 aaPredicted RBP29.15■■■□□ 2.26
SEMA3B-205ENST00000434030 ADAMTS8Q9UP79 889 aa29.15■■■□□ 2.26
SEMA3B-205ENST00000434030 RUNDC1Q96C34 613 aa29.14■■■□□ 2.26
SEMA3B-205ENST00000434030 RRP7AQ9Y3A4 280 aaKnown RBP29.13■■■□□ 2.25
SEMA3B-205ENST00000434030 LMOD3Q0VAK6 560 aa29.12■■■□□ 2.25
SEMA3B-205ENST00000434030 NEUROD2Q15784 382 aa29.11■■■□□ 2.25
SEMA3B-205ENST00000434030 DALRD3Q5D0E6 543 aaKnown RBP29.11■■■□□ 2.25
SEMA3B-205ENST00000434030 SETDB2Q96T68 719 aa29.11■■■□□ 2.25
SEMA3B-205ENST00000434030 TSPYL4Q9UJ04 414 aa29.11■■■□□ 2.25
SEMA3B-205ENST00000434030 ADCY9O60503 1353 aa29.11■■■□□ 2.25
SEMA3B-205ENST00000434030 CARMIL3Q8ND23 1372 aa29.11■■■□□ 2.25
SEMA3B-205ENST00000434030 ARHGAP27Q6ZUM4 889 aa29.1■■■□□ 2.25
SEMA3B-205ENST00000434030 NUP98P52948 1817 aa29.09■■■□□ 2.25
SEMA3B-205ENST00000434030 CLEC4GQ6UXB4 293 aa29.09■■■□□ 2.25
SEMA3B-205ENST00000434030 ATP10DQ9P241 1426 aa29.09■■■□□ 2.25
SEMA3B-205ENST00000434030 SBF1O95248 1867 aa29.08■■■□□ 2.25
SEMA3B-205ENST00000434030 PRR5LQ6MZQ0 368 aa29.07■■■□□ 2.24
SEMA3B-205ENST00000434030 BABAM1Q9NWV8 329 aa29.07■■■□□ 2.24
SEMA3B-205ENST00000434030 TRIM35Q9UPQ4 493 aa29.06■■■□□ 2.24
SEMA3B-205ENST00000434030 ZNF652Q9Y2D9 606 aa29.06■■■□□ 2.24
SEMA3B-205ENST00000434030 C2CD5Q86YS7 1000 aa29.05■■■□□ 2.24
SEMA3B-205ENST00000434030 CCDC24Q8N4L8 307 aa29.05■■■□□ 2.24
SEMA3B-205ENST00000434030 H0YIN7 160 aa29.04■■■□□ 2.24
SEMA3B-205ENST00000434030 BRIP1Q9BX63 1249 aa29.04■■■□□ 2.24
SEMA3B-205ENST00000434030 ZNF316A6NFI3 1004 aaPredicted RBP29.03■■■□□ 2.24
SEMA3B-205ENST00000434030 RGL2O15211 777 aa29.03■■■□□ 2.24
SEMA3B-205ENST00000434030 NGEFQ8N5V2 710 aa29.03■■■□□ 2.24
SEMA3B-205ENST00000434030 COL11A2P13942 1736 aaPredicted RBP29.03■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms