RNA–Protein interactions for RNA: ENST00000433814.5

PCGF3-206, Transcript of polycomb group ring finger 3, humanhuman

TSL 4

Gene PCGF3, Length 639 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-206ENST00000433814 U2AF1Q01081 240 aaKnown RBP eCLIP20.82■□□□□ 0.923e-6■□□□□ 10.4
PCGF3-206ENST00000433814 RSPH6AQ9H0K4 717 aa20.82■□□□□ 0.92
PCGF3-206ENST00000433814 SENP3-EIF4A1A0A087X0R7 540 aa20.81■□□□□ 0.92
PCGF3-206ENST00000433814 VSIG10Q8N0Z9 540 aa20.81■□□□□ 0.92
PCGF3-206ENST00000433814 ZNF496Q96IT1 587 aaPredicted RBP20.81■□□□□ 0.92
PCGF3-206ENST00000433814 FCHSD2O94868 740 aa20.8■□□□□ 0.92
PCGF3-206ENST00000433814 COL15A1P39059 1388 aa20.8■□□□□ 0.92
PCGF3-206ENST00000433814 SIPA1L3O60292 1781 aaPredicted RBP20.8■□□□□ 0.92
PCGF3-206ENST00000433814 TM4SF1P30408 202 aa20.79■□□□□ 0.92
PCGF3-206ENST00000433814 ZNF790Q6PG37 636 aa20.79■□□□□ 0.92
PCGF3-206ENST00000433814 ARHGAP27Q6ZUM4 889 aa20.79■□□□□ 0.92
PCGF3-206ENST00000433814 GPBP1L1Q9HC44 474 aaPredicted RBP20.79■□□□□ 0.92
PCGF3-206ENST00000433814 NARFQ9UHQ1 456 aa20.79■□□□□ 0.92
PCGF3-206ENST00000433814 BRCA1P38398 1863 aaKnown RBP20.78■□□□□ 0.92
PCGF3-206ENST00000433814 POLRMTO00411 1230 aaKnown RBP20.78■□□□□ 0.92
PCGF3-206ENST00000433814 STARD3NLO95772 234 aa20.78■□□□□ 0.92
PCGF3-206ENST00000433814 KCNA3P22001 575 aa20.78■□□□□ 0.92
PCGF3-206ENST00000433814 KCNQ3O43525 872 aa20.77■□□□□ 0.92
PCGF3-206ENST00000433814 ZNF330Q9Y3S2 320 aaPredicted RBP20.77■□□□□ 0.92
PCGF3-206ENST00000433814 AFDNP55196 1824 aaKnown RBP20.76■□□□□ 0.91
PCGF3-206ENST00000433814 ADCY9O60503 1353 aa20.76■□□□□ 0.91
PCGF3-206ENST00000433814 HEG1Q9ULI3 1381 aa20.76■□□□□ 0.91
PCGF3-206ENST00000433814 BTBD11A6QL63 1104 aa20.76■□□□□ 0.91
PCGF3-206ENST00000433814 CHRNA5P30532 468 aa20.76■□□□□ 0.91
PCGF3-206ENST00000433814 NFIXQ14938 502 aa20.76■□□□□ 0.91
PCGF3-206ENST00000433814 PIM2Q9P1W9 311 aa20.76■□□□□ 0.91
PCGF3-206ENST00000433814 MCM10Q7L590 875 aa20.75■□□□□ 0.91
PCGF3-206ENST00000433814 BCL2L12Q9HB09 334 aa20.75■□□□□ 0.91
PCGF3-206ENST00000433814 BICDL1Q6ZP65 573 aa20.74■□□□□ 0.91
PCGF3-206ENST00000433814 RTF1Q92541 710 aaKnown RBP20.74■□□□□ 0.91
PCGF3-206ENST00000433814 FMNL2Q96PY5 1086 aa20.74■□□□□ 0.91
PCGF3-206ENST00000433814 CEMIPQ8WUJ3 1361 aa20.73■□□□□ 0.91
PCGF3-206ENST00000433814 EIF5P55010 431 aaKnown RBP20.73■□□□□ 0.91
PCGF3-206ENST00000433814 DCTN1Q14203 1278 aa20.73■□□□□ 0.91
PCGF3-206ENST00000433814 TEX13AQ9BXU3 409 aaPredicted RBP20.73■□□□□ 0.91
PCGF3-206ENST00000433814 ARFGEF1Q9Y6D6 1849 aa20.72■□□□□ 0.91
PCGF3-206ENST00000433814 A1BGP04217 495 aa20.72■□□□□ 0.91
PCGF3-206ENST00000433814 SERPINB2P05120 415 aa20.72■□□□□ 0.91
PCGF3-206ENST00000433814 DALRD3Q5D0E6 543 aaKnown RBP20.72■□□□□ 0.91
PCGF3-206ENST00000433814 TBC1D2BQ9UPU7 963 aa20.72■□□□□ 0.91
PCGF3-206ENST00000433814 A0A087WZG4 1122 aa20.71■□□□□ 0.91
PCGF3-206ENST00000433814 PIP4K2AP48426 406 aaPredicted RBP20.69■□□□□ 0.9
PCGF3-206ENST00000433814 NPM2Q86SE8 214 aaKnown RBP20.69■□□□□ 0.9
PCGF3-206ENST00000433814 PRAMEF22A3QJZ6 481 aa20.68■□□□□ 0.9
PCGF3-206ENST00000433814 TBC1D9BQ66K14 1250 aa20.68■□□□□ 0.9
PCGF3-206ENST00000433814 USP16Q9Y5T5 823 aa20.68■□□□□ 0.9
PCGF3-206ENST00000433814 IL6STP40189 918 aaPredicted RBP20.67■□□□□ 0.9
PCGF3-206ENST00000433814 C9orf131Q5VYM1 1079 aa20.67■□□□□ 0.9
PCGF3-206ENST00000433814 NRXN2Q9P2S2 1712 aa20.67■□□□□ 0.9
PCGF3-206ENST00000433814 DLG5Q8TDM6 1919 aa20.66■□□□□ 0.9
PCGF3-206ENST00000433814 CCDC24Q8N4L8 307 aa20.66■□□□□ 0.9
PCGF3-206ENST00000433814 MIS18AQ9NYP9 233 aa20.66■□□□□ 0.9
PCGF3-206ENST00000433814 NEFMP07197 916 aa20.65■□□□□ 0.9
PCGF3-206ENST00000433814 C2CD5Q86YS7 1000 aa20.65■□□□□ 0.9
PCGF3-206ENST00000433814 CARMIL3Q8ND23 1372 aa20.64■□□□□ 0.89
PCGF3-206ENST00000433814 SBF1O95248 1867 aa20.63■□□□□ 0.89
PCGF3-206ENST00000433814 HTATSF1O43719 755 aaKnown RBP20.63■□□□□ 0.89
PCGF3-206ENST00000433814 SNRPA1P09661 255 aaKnown RBP20.63■□□□□ 0.89
PCGF3-206ENST00000433814 TAF7Q15545 349 aaPredicted RBP20.63■□□□□ 0.89
PCGF3-206ENST00000433814 SCN7AQ01118 1682 aa20.63■□□□□ 0.89
PCGF3-206ENST00000433814 H0YIN7 160 aa20.62■□□□□ 0.89
PCGF3-206ENST00000433814 KIF3CO14782 793 aa20.62■□□□□ 0.89
PCGF3-206ENST00000433814 CAMTA2O94983 1202 aa20.62■□□□□ 0.89
PCGF3-206ENST00000433814 DZIP3Q86Y13 1208 aaKnown RBP20.62■□□□□ 0.89
PCGF3-206ENST00000433814 RNF181Q9P0P0 153 aa20.62■□□□□ 0.89
PCGF3-206ENST00000433814 ANKRD31Q8N7Z5 1873 aa20.61■□□□□ 0.89
PCGF3-206ENST00000433814 NPHP1O15259 732 aa20.61■□□□□ 0.89
PCGF3-206ENST00000433814 SETDB2Q96T68 719 aa20.61■□□□□ 0.89
PCGF3-206ENST00000433814 DLEC1Q9Y238 1755 aa20.61■□□□□ 0.89
PCGF3-206ENST00000433814 CEP350Q5VT06 3117 aa20.61■□□□□ 0.89
PCGF3-206ENST00000433814 TTLL6Q8N841 843 aa20.6■□□□□ 0.89
PCGF3-206ENST00000433814 ZNF622Q969S3 477 aaKnown RBP eCLIP20.6■□□□□ 0.892e-6■■■□□ 15.3
PCGF3-206ENST00000433814 PLEKHF1Q96S99 279 aa20.6■□□□□ 0.89
PCGF3-206ENST00000433814 NMRK2Q9NPI5 230 aa20.6■□□□□ 0.89
PCGF3-206ENST00000433814 RASSF7Q02833 373 aa20.59■□□□□ 0.89
PCGF3-206ENST00000433814 PRR5LQ6MZQ0 368 aa20.59■□□□□ 0.89
PCGF3-206ENST00000433814 THUMPD2Q9BTF0 503 aaKnown RBP20.59■□□□□ 0.89
PCGF3-206ENST00000433814 CCDC88AQ3V6T2 1871 aa20.58■□□□□ 0.89
PCGF3-206ENST00000433814 DDX10Q13206 875 aaKnown RBP20.58■□□□□ 0.89
PCGF3-206ENST00000433814 ZNF219Q9P2Y4 722 aaPredicted RBP20.58■□□□□ 0.89
PCGF3-206ENST00000433814 BCORQ6W2J9 1755 aa20.58■□□□□ 0.89
PCGF3-206ENST00000433814 NBPF26B4DH59 902 aa20.57■□□□□ 0.88
PCGF3-206ENST00000433814 PDE6BP35913 854 aa20.57■□□□□ 0.88
PCGF3-206ENST00000433814 NFE2L2Q16236 605 aa20.57■□□□□ 0.88
PCGF3-206ENST00000433814 NBPF10Q6P3W6 841 aaKnown RBP20.57■□□□□ 0.88
PCGF3-206ENST00000433814 NBPF15Q8N660 670 aa20.57■□□□□ 0.88
PCGF3-206ENST00000433814 CNBD1Q8NA66 436 aa20.57■□□□□ 0.88
PCGF3-206ENST00000433814 BRIP1Q9BX63 1249 aa20.57■□□□□ 0.88
PCGF3-206ENST00000433814 MAPK8IP3Q9UPT6 1336 aa20.56■□□□□ 0.88
PCGF3-206ENST00000433814 HSPA6P17066 643 aa20.56■□□□□ 0.88
PCGF3-206ENST00000433814 NGEFQ8N5V2 710 aa20.55■□□□□ 0.88
PCGF3-206ENST00000433814 PNNQ9H307 717 aaKnown RBP20.55■□□□□ 0.88
PCGF3-206ENST00000433814 CACNA1SQ13698 1873 aa20.55■□□□□ 0.88
PCGF3-206ENST00000433814 COL11A2P13942 1736 aaPredicted RBP20.54■□□□□ 0.88
PCGF3-206ENST00000433814 ST5P78524 1137 aa20.54■□□□□ 0.88
PCGF3-206ENST00000433814 RALBP1Q15311 655 aa20.54■□□□□ 0.88
PCGF3-206ENST00000433814 FAM177BA6PVY3 158 aa20.53■□□□□ 0.88
PCGF3-206ENST00000433814 C21orf2O43822 256 aa20.53■□□□□ 0.88
PCGF3-206ENST00000433814 TOMM70O94826 608 aa20.53■□□□□ 0.88
PCGF3-206ENST00000433814 PRELPP51888 382 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 113 ms