RNA–Protein interactions for RNA: ENST00000433535.6

RPUSD3-206, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-206ENST00000433535 TEFQ10587 303 aa29.28■■■□□ 2.28
RPUSD3-206ENST00000433535 VSIG10Q8N0Z9 540 aa29.28■■■□□ 2.28
RPUSD3-206ENST00000433535 PHACTR3Q96KR7 559 aa29.28■■■□□ 2.28
RPUSD3-206ENST00000433535 RSPH6AQ9H0K4 717 aa29.28■■■□□ 2.28
RPUSD3-206ENST00000433535 POLRMTO00411 1230 aaKnown RBP29.26■■■□□ 2.27
RPUSD3-206ENST00000433535 GPBP1L1Q9HC44 474 aaPredicted RBP29.26■■■□□ 2.27
RPUSD3-206ENST00000433535 ZNF496Q96IT1 587 aaPredicted RBP29.25■■■□□ 2.27
RPUSD3-206ENST00000433535 CANXP27824 592 aaKnown RBP29.24■■■□□ 2.27
RPUSD3-206ENST00000433535 AFDNP55196 1824 aaKnown RBP29.23■■■□□ 2.27
RPUSD3-206ENST00000433535 ARFGEF1Q9Y6D6 1849 aa29.23■■■□□ 2.27
RPUSD3-206ENST00000433535 FCHSD2O94868 740 aa29.23■■■□□ 2.27
RPUSD3-206ENST00000433535 KCNA3P22001 575 aa29.23■■■□□ 2.27
RPUSD3-206ENST00000433535 TM4SF1P30408 202 aa29.23■■■□□ 2.27
RPUSD3-206ENST00000433535 ZNF790Q6PG37 636 aa29.23■■■□□ 2.27
RPUSD3-206ENST00000433535 NARFQ9UHQ1 456 aa29.23■■■□□ 2.27
RPUSD3-206ENST00000433535 CEMIPQ8WUJ3 1361 aa29.23■■■□□ 2.27
RPUSD3-206ENST00000433535 HEG1Q9ULI3 1381 aa29.23■■■□□ 2.27
RPUSD3-206ENST00000433535 NUDCQ9Y266 331 aa29.22■■■□□ 2.27
RPUSD3-206ENST00000433535 U2AF1L5P0DN76 240 aaPredicted RBP29.21■■■□□ 2.27
RPUSD3-206ENST00000433535 U2AF1Q01081 240 aaKnown RBP eCLIP29.21■■■□□ 2.27
RPUSD3-206ENST00000433535 BCL2L12Q9HB09 334 aa29.21■■■□□ 2.27
RPUSD3-206ENST00000433535 NRXN2Q9P2S2 1712 aa29.2■■■□□ 2.27
RPUSD3-206ENST00000433535 CHRNA5P30532 468 aa29.2■■■□□ 2.26
RPUSD3-206ENST00000433535 NFIXQ14938 502 aa29.2■■■□□ 2.26
RPUSD3-206ENST00000433535 STARD3NLO95772 234 aa29.19■■■□□ 2.26
RPUSD3-206ENST00000433535 ARHGAP27Q6ZUM4 889 aa29.19■■■□□ 2.26
RPUSD3-206ENST00000433535 SCN7AQ01118 1682 aa29.18■■■□□ 2.26
RPUSD3-206ENST00000433535 PIM2Q9P1W9 311 aa29.18■■■□□ 2.26
RPUSD3-206ENST00000433535 KCNQ3O43525 872 aa29.16■■■□□ 2.26
RPUSD3-206ENST00000433535 EIF5P55010 431 aaKnown RBP29.16■■■□□ 2.26
RPUSD3-206ENST00000433535 FMNL2Q96PY5 1086 aa29.16■■■□□ 2.26
RPUSD3-206ENST00000433535 ZNF330Q9Y3S2 320 aaPredicted RBP29.15■■■□□ 2.26
RPUSD3-206ENST00000433535 BTBD11A6QL63 1104 aa29.14■■■□□ 2.26
RPUSD3-206ENST00000433535 DALRD3Q5D0E6 543 aaKnown RBP29.14■■■□□ 2.26
RPUSD3-206ENST00000433535 MCM10Q7L590 875 aa29.13■■■□□ 2.25
RPUSD3-206ENST00000433535 DLEC1Q9Y238 1755 aa29.12■■■□□ 2.25
RPUSD3-206ENST00000433535 BICDL1Q6ZP65 573 aa29.12■■■□□ 2.25
RPUSD3-206ENST00000433535 TEX13AQ9BXU3 409 aaPredicted RBP29.12■■■□□ 2.25
RPUSD3-206ENST00000433535 CARMIL3Q8ND23 1372 aa29.12■■■□□ 2.25
RPUSD3-206ENST00000433535 SERPINB2P05120 415 aa29.11■■■□□ 2.25
RPUSD3-206ENST00000433535 A0A087WZG4 1122 aa29.1■■■□□ 2.25
RPUSD3-206ENST00000433535 A1BGP04217 495 aa29.1■■■□□ 2.25
RPUSD3-206ENST00000433535 RTF1Q92541 710 aaKnown RBP29.1■■■□□ 2.25
RPUSD3-206ENST00000433535 DCTN1Q14203 1278 aa29.09■■■□□ 2.25
RPUSD3-206ENST00000433535 TBC1D2BQ9UPU7 963 aa29.09■■■□□ 2.25
RPUSD3-206ENST00000433535 KIF3CO14782 793 aa29.07■■■□□ 2.24
RPUSD3-206ENST00000433535 IL6STP40189 918 aaPredicted RBP29.07■■■□□ 2.24
RPUSD3-206ENST00000433535 TBC1D9BQ66K14 1250 aa29.07■■■□□ 2.24
RPUSD3-206ENST00000433535 BCORQ6W2J9 1755 aa29.07■■■□□ 2.24
RPUSD3-206ENST00000433535 PRAMEF22A3QJZ6 481 aa29.06■■■□□ 2.24
RPUSD3-206ENST00000433535 PIP4K2AP48426 406 aaPredicted RBP29.06■■■□□ 2.24
RPUSD3-206ENST00000433535 C9orf131Q5VYM1 1079 aa29.06■■■□□ 2.24
RPUSD3-206ENST00000433535 ANKRD31Q8N7Z5 1873 aa29.06■■■□□ 2.24
RPUSD3-206ENST00000433535 DLG5Q8TDM6 1919 aa29.05■■■□□ 2.24
RPUSD3-206ENST00000433535 USP16Q9Y5T5 823 aa29.04■■■□□ 2.24
RPUSD3-206ENST00000433535 C2CD5Q86YS7 1000 aa29.02■■■□□ 2.24
RPUSD3-206ENST00000433535 COL11A2P13942 1736 aaPredicted RBP29.02■■■□□ 2.24
RPUSD3-206ENST00000433535 SBF1O95248 1867 aa29.02■■■□□ 2.24
RPUSD3-206ENST00000433535 CAMTA2O94983 1202 aa29.01■■■□□ 2.23
RPUSD3-206ENST00000433535 NPM2Q86SE8 214 aaKnown RBP29.01■■■□□ 2.23
RPUSD3-206ENST00000433535 RNF181Q9P0P0 153 aa29.01■■■□□ 2.23
RPUSD3-206ENST00000433535 HTATSF1O43719 755 aaKnown RBP29■■■□□ 2.23
RPUSD3-206ENST00000433535 CCDC24Q8N4L8 307 aa29■■■□□ 2.23
RPUSD3-206ENST00000433535 NMRK2Q9NPI5 230 aa29■■■□□ 2.23
RPUSD3-206ENST00000433535 SNRPA1P09661 255 aaKnown RBP28.99■■■□□ 2.23
RPUSD3-206ENST00000433535 RASSF7Q02833 373 aa28.99■■■□□ 2.23
RPUSD3-206ENST00000433535 DZIP3Q86Y13 1208 aaKnown RBP28.99■■■□□ 2.23
RPUSD3-206ENST00000433535 PRR5LQ6MZQ0 368 aa28.98■■■□□ 2.23
RPUSD3-206ENST00000433535 LAMB4A4D0S4 1761 aa28.98■■■□□ 2.23
RPUSD3-206ENST00000433535 H0YIN7 160 aa28.97■■■□□ 2.23
RPUSD3-206ENST00000433535 TTLL6Q8N841 843 aa28.97■■■□□ 2.23
RPUSD3-206ENST00000433535 MIS18AQ9NYP9 233 aa28.97■■■□□ 2.23
RPUSD3-206ENST00000433535 KDM3BQ7LBC6 1761 aa28.97■■■□□ 2.23
RPUSD3-206ENST00000433535 NEFMP07197 916 aa28.96■■■□□ 2.23
RPUSD3-206ENST00000433535 HSPA6P17066 643 aa28.96■■■□□ 2.23
RPUSD3-206ENST00000433535 TAF7Q15545 349 aaPredicted RBP28.95■■■□□ 2.22
RPUSD3-206ENST00000433535 PLEKHF1Q96S99 279 aa28.95■■■□□ 2.22
RPUSD3-206ENST00000433535 SETDB2Q96T68 719 aa28.94■■■□□ 2.22
RPUSD3-206ENST00000433535 CNBD1Q8NA66 436 aa28.93■■■□□ 2.22
RPUSD3-206ENST00000433535 NBPF26B4DH59 902 aa28.92■■■□□ 2.22
RPUSD3-206ENST00000433535 NBPF10Q6P3W6 841 aaKnown RBP28.92■■■□□ 2.22
RPUSD3-206ENST00000433535 NBPF15Q8N660 670 aa28.92■■■□□ 2.22
RPUSD3-206ENST00000433535 THUMPD2Q9BTF0 503 aaKnown RBP28.92■■■□□ 2.22
RPUSD3-206ENST00000433535 BRIP1Q9BX63 1249 aa28.92■■■□□ 2.22
RPUSD3-206ENST00000433535 TIAM2Q8IVF5 1701 aa28.91■■■□□ 2.22
RPUSD3-206ENST00000433535 NPHP1O15259 732 aa28.91■■■□□ 2.22
RPUSD3-206ENST00000433535 PDE6BP35913 854 aa28.91■■■□□ 2.22
RPUSD3-206ENST00000433535 PRELPP51888 382 aa28.91■■■□□ 2.22
RPUSD3-206ENST00000433535 ZNF622Q969S3 477 aaKnown RBP eCLIP28.91■■■□□ 2.22
RPUSD3-206ENST00000433535 CACNA1SQ13698 1873 aa28.91■■■□□ 2.22
RPUSD3-206ENST00000433535 NFE2L2Q16236 605 aa28.9■■■□□ 2.22
RPUSD3-206ENST00000433535 TNRC6CQ9HCJ0 1690 aaKnown RBP28.89■■■□□ 2.22
RPUSD3-206ENST00000433535 TOMM70O94826 608 aa28.89■■■□□ 2.22
RPUSD3-206ENST00000433535 KDM2BQ8NHM5 1336 aa28.89■■■□□ 2.21
RPUSD3-206ENST00000433535 MAPK8IP3Q9UPT6 1336 aa28.89■■■□□ 2.21
RPUSD3-206ENST00000433535 CCDC88AQ3V6T2 1871 aa28.89■■■□□ 2.21
RPUSD3-206ENST00000433535 ZNF219Q9P2Y4 722 aaPredicted RBP28.88■■■□□ 2.21
RPUSD3-206ENST00000433535 NFKBIEO00221 500 aa28.87■■■□□ 2.21
RPUSD3-206ENST00000433535 LMNB1P20700 586 aa28.87■■■□□ 2.21
RPUSD3-206ENST00000433535 ST5P78524 1137 aa28.87■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms