RNA–Protein interactions for RNA: ENST00000432561.6

CHFR-203, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHFR, Length 2,648 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-203ENST00000432561 FOXD4L5Q5VV16 416 aaPredicted RBP20.33■□□□□ 0.85
CHFR-203ENST00000432561 FOXD4L4Q8WXT5 416 aaPredicted RBP20.33■□□□□ 0.85
CHFR-203ENST00000432561 ZNF142P52746 1687 aaPredicted RBP20.33■□□□□ 0.85
CHFR-203ENST00000432561 ADCY9O60503 1353 aa20.33■□□□□ 0.85
CHFR-203ENST00000432561 MCTP1Q6DN14 999 aa20.33■□□□□ 0.84
CHFR-203ENST00000432561 DDX17Q92841 729 aaKnown RBP20.33■□□□□ 0.84
CHFR-203ENST00000432561 RGPD5Q99666 1765 aa20.33■□□□□ 0.84
CHFR-203ENST00000432561 NPHP4O75161 1426 aaPredicted RBP20.33■□□□□ 0.84
CHFR-203ENST00000432561 LMO7Q8WWI1 1683 aa20.32■□□□□ 0.84
CHFR-203ENST00000432561 RHPN1Q8TCX5 695 aa20.32■□□□□ 0.84
CHFR-203ENST00000432561 STAP2Q9UGK3 403 aa20.32■□□□□ 0.84
CHFR-203ENST00000432561 GRPEL1Q9HAV7 217 aa20.31■□□□□ 0.84
CHFR-203ENST00000432561 POLA2Q14181 598 aa20.31■□□□□ 0.84
CHFR-203ENST00000432561 CWF19L2Q2TBE0 894 aaKnown RBP20.3■□□□□ 0.84
CHFR-203ENST00000432561 UPF3BQ9BZI7 483 aaKnown RBP20.3■□□□□ 0.84
CHFR-203ENST00000432561 MAP3K2Q9Y2U5 619 aa20.3■□□□□ 0.84
CHFR-203ENST00000432561 KRT28Q7Z3Y7 464 aa20.3■□□□□ 0.84
CHFR-203ENST00000432561 PROSER2Q86WR7 435 aaPredicted RBP20.29■□□□□ 0.84
CHFR-203ENST00000432561 CYP2E1P05181 493 aaPredicted RBP20.29■□□□□ 0.84
CHFR-203ENST00000432561 ZDHHC9Q9Y397 364 aa20.29■□□□□ 0.84
CHFR-203ENST00000432561 DDX49Q9Y6V7 483 aaKnown RBP20.29■□□□□ 0.84
CHFR-203ENST00000432561 GIGYF1O75420 1035 aaPredicted RBP20.28■□□□□ 0.84
CHFR-203ENST00000432561 MRE11P49959 708 aa20.28■□□□□ 0.84
CHFR-203ENST00000432561 TMX3Q96JJ7 454 aa20.28■□□□□ 0.84
CHFR-203ENST00000432561 RRAGDQ9NQL2 400 aaPredicted RBP20.28■□□□□ 0.84
CHFR-203ENST00000432561 AIMP1Q12904 312 aaKnown RBP20.28■□□□□ 0.84
CHFR-203ENST00000432561 AMOTQ4VCS5 1084 aa20.28■□□□□ 0.84
CHFR-203ENST00000432561 PI4K2BQ8TCG2 481 aa20.28■□□□□ 0.84
CHFR-203ENST00000432561 DBF4Q9UBU7 674 aaPredicted RBP20.28■□□□□ 0.84
CHFR-203ENST00000432561 GOLGA6L22H0YM25 854 aa20.27■□□□□ 0.84
CHFR-203ENST00000432561 HOXB7P09629 217 aa20.27■□□□□ 0.84
CHFR-203ENST00000432561 SLC39A6Q13433 755 aa20.27■□□□□ 0.84
CHFR-203ENST00000432561 PA2G4Q9UQ80 394 aaKnown RBP20.27■□□□□ 0.84
CHFR-203ENST00000432561 PHRF1Q9P1Y6 1649 aaKnown RBP20.27■□□□□ 0.84
CHFR-203ENST00000432561 NUCB2P80303 420 aa20.27■□□□□ 0.84
CHFR-203ENST00000432561 OS9Q13438 667 aaPredicted RBP20.27■□□□□ 0.84
CHFR-203ENST00000432561 NCLP19338 710 aaKnown RBP20.26■□□□□ 0.83
CHFR-203ENST00000432561 FAM43AQ8N2R8 423 aa20.26■□□□□ 0.83
CHFR-203ENST00000432561 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.26■□□□□ 0.83
CHFR-203ENST00000432561 ADAMTSL3P82987 1691 aa20.26■□□□□ 0.83
CHFR-203ENST00000432561 SKOR2Q2VWA4 1001 aaPredicted RBP20.26■□□□□ 0.83
CHFR-203ENST00000432561 KIF1BPQ96EK5 621 aa20.26■□□□□ 0.83
CHFR-203ENST00000432561 C9orf78Q9NZ63 289 aaPredicted RBP20.26■□□□□ 0.83
CHFR-203ENST00000432561 CLEC17AQ6ZS10 378 aa20.25■□□□□ 0.83
CHFR-203ENST00000432561 SLIT3O75094 1523 aa20.25■□□□□ 0.83
CHFR-203ENST00000432561 RAB11FIP3O75154 756 aa20.25■□□□□ 0.83
CHFR-203ENST00000432561 MCCP23508 829 aa20.24■□□□□ 0.83
CHFR-203ENST00000432561 CABLES1Q8TDN4 633 aa20.23■□□□□ 0.83
CHFR-203ENST00000432561 ANO8Q9HCE9 1232 aaPredicted RBP20.23■□□□□ 0.83
CHFR-203ENST00000432561 CWC22Q9HCG8 908 aaKnown RBP20.23■□□□□ 0.83
CHFR-203ENST00000432561 TRPM3Q9HCF6 1732 aaPredicted RBP20.23■□□□□ 0.83
CHFR-203ENST00000432561 NLRP2Q9NX02 1062 aa20.23■□□□□ 0.83
CHFR-203ENST00000432561 ERBB3P21860 1342 aa20.23■□□□□ 0.83
CHFR-203ENST00000432561 LMBRD1Q9NUN5 540 aa20.23■□□□□ 0.83
CHFR-203ENST00000432561 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.23■□□□□ 0.83
CHFR-203ENST00000432561 PRPF40AO75400 957 aaKnown RBP20.22■□□□□ 0.83
CHFR-203ENST00000432561 PIP4K2AP48426 406 aaPredicted RBP20.22■□□□□ 0.83
CHFR-203ENST00000432561 KLHL40Q2TBA0 621 aa20.22■□□□□ 0.83
CHFR-203ENST00000432561 CWC27Q6UX04 472 aaKnown RBP20.22■□□□□ 0.83
CHFR-203ENST00000432561 LARP6Q9BRS8 491 aaKnown RBP20.22■□□□□ 0.83
CHFR-203ENST00000432561 CAVIN1Q6NZI2 390 aaKnown RBP20.22■□□□□ 0.83
CHFR-203ENST00000432561 KSR2Q6VAB6 950 aa20.22■□□□□ 0.83
CHFR-203ENST00000432561 SPG7Q9UQ90 795 aa20.22■□□□□ 0.83
CHFR-203ENST00000432561 MYL6BP14649 208 aa20.21■□□□□ 0.83
CHFR-203ENST00000432561 FOXD4L6Q3SYB3 417 aaPredicted RBP20.21■□□□□ 0.83
CHFR-203ENST00000432561 FOXD4L3Q6VB84 417 aaPredicted RBP20.21■□□□□ 0.83
CHFR-203ENST00000432561 AOX1Q06278 1338 aa20.21■□□□□ 0.83
CHFR-203ENST00000432561 NCAPD2Q15021 1401 aa20.21■□□□□ 0.83
CHFR-203ENST00000432561 C1orf167Q5SNV9 1468 aa20.21■□□□□ 0.83
CHFR-203ENST00000432561 PTMSP20962 102 aa20.2■□□□□ 0.82
CHFR-203ENST00000432561 DTNBO60941 627 aa20.19■□□□□ 0.82
CHFR-203ENST00000432561 RBM27Q9P2N5 1060 aaKnown RBP20.19■□□□□ 0.82
CHFR-203ENST00000432561 HEG1Q9ULI3 1381 aa20.19■□□□□ 0.82
CHFR-203ENST00000432561 CHRNA2Q15822 529 aa20.19■□□□□ 0.82
CHFR-203ENST00000432561 NFATC2IPQ8NCF5 419 aa20.19■□□□□ 0.82
CHFR-203ENST00000432561 KAZALD1Q96I82 304 aa20.19■□□□□ 0.82
CHFR-203ENST00000432561 SUCLG2Q96I99 432 aa20.19■□□□□ 0.82
CHFR-203ENST00000432561 SIPA1L3O60292 1781 aaPredicted RBP20.18■□□□□ 0.82
CHFR-203ENST00000432561 SGSM2O43147 1006 aa20.18■□□□□ 0.82
CHFR-203ENST00000432561 HSPA4P34932 840 aa20.18■□□□□ 0.82
CHFR-203ENST00000432561 PDIA6Q15084 440 aa20.18■□□□□ 0.82
CHFR-203ENST00000432561 CNTROBQ8N137 903 aa20.18■□□□□ 0.82
CHFR-203ENST00000432561 ANAPC15P60006 121 aa20.18■□□□□ 0.82
CHFR-203ENST00000432561 RASEFQ8IZ41 740 aa20.18■□□□□ 0.82
CHFR-203ENST00000432561 KLHDC4Q8TBB5 520 aa20.18■□□□□ 0.82
CHFR-203ENST00000432561 RAPGEF4Q8WZA2 1011 aa20.18■□□□□ 0.82
CHFR-203ENST00000432561 JARID2Q92833 1246 aaPredicted RBP20.18■□□□□ 0.82
CHFR-203ENST00000432561 CPA1P15085 419 aa20.17■□□□□ 0.82
CHFR-203ENST00000432561 GPT2Q8TD30 523 aa20.17■□□□□ 0.82
CHFR-203ENST00000432561 SIL1Q9H173 461 aa20.17■□□□□ 0.82
CHFR-203ENST00000432561 BICC1Q9H694 974 aaKnown RBP20.17■□□□□ 0.82
CHFR-203ENST00000432561 C19orf44Q9H6X5 657 aa20.17■□□□□ 0.82
CHFR-203ENST00000432561 NSFL1CQ9UNZ2 370 aaKnown RBP20.17■□□□□ 0.82
CHFR-203ENST00000432561 ZNF790Q6PG37 636 aa20.17■□□□□ 0.82
CHFR-203ENST00000432561 CLASRPQ8N2M8 674 aaKnown RBP20.17■□□□□ 0.82
CHFR-203ENST00000432561 GRM8O00222 908 aa20.16■□□□□ 0.82
CHFR-203ENST00000432561 CHMP4AQ9BY43 222 aa20.16■□□□□ 0.82
CHFR-203ENST00000432561 LSG1Q9H089 658 aaKnown RBP20.16■□□□□ 0.82
CHFR-203ENST00000432561 HYPKQ9NX55 129 aa20.16■□□□□ 0.82
CHFR-203ENST00000432561 KDM6AO15550 1401 aaPredicted RBP20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms