RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 PHACTR3Q96KR7 559 aa19.2■□□□□ 0.66
SMARCE1-205ENST00000431889 ZNF330Q9Y3S2 320 aaPredicted RBP19.2■□□□□ 0.66
SMARCE1-205ENST00000431889 UBR2Q8IWV8 1755 aa19.2■□□□□ 0.66
SMARCE1-205ENST00000431889 COL15A1P39059 1388 aa19.19■□□□□ 0.66
SMARCE1-205ENST00000431889 BICDL1Q6ZP65 573 aa19.19■□□□□ 0.66
SMARCE1-205ENST00000431889 KCNQ3O43525 872 aa19.19■□□□□ 0.66
SMARCE1-205ENST00000431889 TM4SF1P30408 202 aa19.19■□□□□ 0.66
SMARCE1-205ENST00000431889 NFIXQ14938 502 aa19.19■□□□□ 0.66
SMARCE1-205ENST00000431889 TTC5Q8N0Z6 440 aa19.18■□□□□ 0.66
SMARCE1-205ENST00000431889 ZNF496Q96IT1 587 aaPredicted RBP19.18■□□□□ 0.66
SMARCE1-205ENST00000431889 BCL2L12Q9HB09 334 aa19.18■□□□□ 0.66
SMARCE1-205ENST00000431889 GNAT3A8MTJ3 354 aa19.17■□□□□ 0.66
SMARCE1-205ENST00000431889 PRKAR2BP31323 418 aa19.17■□□□□ 0.66
SMARCE1-205ENST00000431889 TEFQ10587 303 aa19.17■□□□□ 0.66
SMARCE1-205ENST00000431889 CCDC24Q8N4L8 307 aa19.17■□□□□ 0.66
SMARCE1-205ENST00000431889 PIM2Q9P1W9 311 aa19.17■□□□□ 0.66
SMARCE1-205ENST00000431889 KIF3CO14782 793 aa19.16■□□□□ 0.66
SMARCE1-205ENST00000431889 PIP4K2AP48426 406 aaPredicted RBP19.16■□□□□ 0.66
SMARCE1-205ENST00000431889 SIPA1L3O60292 1781 aaPredicted RBP19.16■□□□□ 0.66
SMARCE1-205ENST00000431889 ARFGEF1Q9Y6D6 1849 aa19.16■□□□□ 0.66
SMARCE1-205ENST00000431889 DALRD3Q5D0E6 543 aaKnown RBP19.15■□□□□ 0.66
SMARCE1-205ENST00000431889 C9orf131Q5VYM1 1079 aa19.15■□□□□ 0.66
SMARCE1-205ENST00000431889 NMRK2Q9NPI5 230 aa19.15■□□□□ 0.66
SMARCE1-205ENST00000431889 NARFQ9UHQ1 456 aa19.15■□□□□ 0.66
SMARCE1-205ENST00000431889 GAS2L2Q8NHY3 880 aa19.15■□□□□ 0.66
SMARCE1-205ENST00000431889 TBC1D2BQ9UPU7 963 aa19.15■□□□□ 0.66
SMARCE1-205ENST00000431889 CARMIL3Q8ND23 1372 aa19.14■□□□□ 0.65
SMARCE1-205ENST00000431889 NPC1L1Q9UHC9 1359 aa19.14■□□□□ 0.65
SMARCE1-205ENST00000431889 ZNF790Q6PG37 636 aa19.14■□□□□ 0.65
SMARCE1-205ENST00000431889 RSPH6AQ9H0K4 717 aa19.14■□□□□ 0.65
SMARCE1-205ENST00000431889 PRAMEF22A3QJZ6 481 aa19.13■□□□□ 0.65
SMARCE1-205ENST00000431889 A1BGP04217 495 aa19.13■□□□□ 0.65
SMARCE1-205ENST00000431889 SERPINB2P05120 415 aa19.13■□□□□ 0.65
SMARCE1-205ENST00000431889 RASSF7Q02833 373 aa19.13■□□□□ 0.65
SMARCE1-205ENST00000431889 DCTN1Q14203 1278 aa19.13■□□□□ 0.65
SMARCE1-205ENST00000431889 U2AF1L5P0DN76 240 aaPredicted RBP19.12■□□□□ 0.65
SMARCE1-205ENST00000431889 PPP2R1AP30153 589 aa19.12■□□□□ 0.65
SMARCE1-205ENST00000431889 U2AF1Q01081 240 aaKnown RBP eCLIP19.12■□□□□ 0.65
SMARCE1-205ENST00000431889 MCM10Q7L590 875 aa19.12■□□□□ 0.65
SMARCE1-205ENST00000431889 HEG1Q9ULI3 1381 aa19.12■□□□□ 0.65
SMARCE1-205ENST00000431889 STARD3NLO95772 234 aa19.11■□□□□ 0.65
SMARCE1-205ENST00000431889 TBC1D9BQ66K14 1250 aa19.11■□□□□ 0.65
SMARCE1-205ENST00000431889 VSIG10Q8N0Z9 540 aa19.11■□□□□ 0.65
SMARCE1-205ENST00000431889 CFAP53Q96M91 514 aa19.11■□□□□ 0.65
SMARCE1-205ENST00000431889 RNF181Q9P0P0 153 aa19.11■□□□□ 0.65
SMARCE1-205ENST00000431889 BTBD11A6QL63 1104 aa19.1■□□□□ 0.65
SMARCE1-205ENST00000431889 ZNF219Q9P2Y4 722 aaPredicted RBP19.1■□□□□ 0.65
SMARCE1-205ENST00000431889 HSPA6P17066 643 aa19.1■□□□□ 0.65
SMARCE1-205ENST00000431889 EIF5P55010 431 aaKnown RBP19.1■□□□□ 0.65
SMARCE1-205ENST00000431889 SBF1O95248 1867 aa19.1■□□□□ 0.65
SMARCE1-205ENST00000431889 NRXN2Q9P2S2 1712 aa19.09■□□□□ 0.65
SMARCE1-205ENST00000431889 C2CD5Q86YS7 1000 aa19.09■□□□□ 0.65
SMARCE1-205ENST00000431889 ANKRD31Q8N7Z5 1873 aa19.07■□□□□ 0.64
SMARCE1-205ENST00000431889 FMNL2Q96PY5 1086 aa19.07■□□□□ 0.64
SMARCE1-205ENST00000431889 USP16Q9Y5T5 823 aa19.07■□□□□ 0.64
SMARCE1-205ENST00000431889 PRELPP51888 382 aa19.06■□□□□ 0.64
SMARCE1-205ENST00000431889 MIS18AQ9NYP9 233 aa19.06■□□□□ 0.64
SMARCE1-205ENST00000431889 NUDCQ9Y266 331 aa19.06■□□□□ 0.64
SMARCE1-205ENST00000431889 CCDC88AQ3V6T2 1871 aa19.06■□□□□ 0.64
SMARCE1-205ENST00000431889 SCN7AQ01118 1682 aa19.06■□□□□ 0.64
SMARCE1-205ENST00000431889 CEMIPQ8WUJ3 1361 aa19.06■□□□□ 0.64
SMARCE1-205ENST00000431889 CACNA1SQ13698 1873 aa19.06■□□□□ 0.64
SMARCE1-205ENST00000431889 DLEC1Q9Y238 1755 aa19.06■□□□□ 0.64
SMARCE1-205ENST00000431889 ZNF622Q969S3 477 aaKnown RBP eCLIP19.05■□□□□ 0.648e-14■■■□□ 17.5
SMARCE1-205ENST00000431889 RRAGCQ9HB90 399 aa19.05■□□□□ 0.64
SMARCE1-205ENST00000431889 HTRA3P83110 453 aa19.04■□□□□ 0.64
SMARCE1-205ENST00000431889 RTF1Q92541 710 aaKnown RBP19.04■□□□□ 0.64
SMARCE1-205ENST00000431889 COL11A2P13942 1736 aaPredicted RBP19.04■□□□□ 0.64
SMARCE1-205ENST00000431889 A0A087WZG4 1122 aa19.03■□□□□ 0.64
SMARCE1-205ENST00000431889 H0YIN7 160 aa19.03■□□□□ 0.64
SMARCE1-205ENST00000431889 NPHP1O15259 732 aa19.02■□□□□ 0.63
SMARCE1-205ENST00000431889 TOMM70O94826 608 aa19.02■□□□□ 0.63
SMARCE1-205ENST00000431889 CAMTA2O94983 1202 aa19.02■□□□□ 0.63
SMARCE1-205ENST00000431889 IL6STP40189 918 aaPredicted RBP19.02■□□□□ 0.63
SMARCE1-205ENST00000431889 PRR5LQ6MZQ0 368 aa19.02■□□□□ 0.63
SMARCE1-205ENST00000431889 DZIP3Q86Y13 1208 aaKnown RBP19.02■□□□□ 0.63
SMARCE1-205ENST00000431889 TTLL6Q8N841 843 aa19.02■□□□□ 0.63
SMARCE1-205ENST00000431889 TEX13AQ9BXU3 409 aaPredicted RBP19.02■□□□□ 0.63
SMARCE1-205ENST00000431889 DLG5Q8TDM6 1919 aa19.01■□□□□ 0.63
SMARCE1-205ENST00000431889 NPM2Q86SE8 214 aaKnown RBP19.01■□□□□ 0.63
SMARCE1-205ENST00000431889 BCORQ6W2J9 1755 aa19■□□□□ 0.63
SMARCE1-205ENST00000431889 FAM177BA6PVY3 158 aa19■□□□□ 0.63
SMARCE1-205ENST00000431889 C21orf2O43822 256 aa19■□□□□ 0.63
SMARCE1-205ENST00000431889 C16orf71Q8IYS4 520 aaPredicted RBP19■□□□□ 0.63
SMARCE1-205ENST00000431889 THUMPD2Q9BTF0 503 aaKnown RBP19■□□□□ 0.63
SMARCE1-205ENST00000431889 NGEFQ8N5V2 710 aa18.99■□□□□ 0.63
SMARCE1-205ENST00000431889 TIAM2Q8IVF5 1701 aa18.99■□□□□ 0.63
SMARCE1-205ENST00000431889 NFKBIEO00221 500 aa18.98■□□□□ 0.63
SMARCE1-205ENST00000431889 SETDB2Q96T68 719 aa18.98■□□□□ 0.63
SMARCE1-205ENST00000431889 NBPF26B4DH59 902 aa18.98■□□□□ 0.63
SMARCE1-205ENST00000431889 NBPF10Q6P3W6 841 aaKnown RBP18.98■□□□□ 0.63
SMARCE1-205ENST00000431889 NBPF15Q8N660 670 aa18.98■□□□□ 0.63
SMARCE1-205ENST00000431889 KDM2BQ8NHM5 1336 aa18.97■□□□□ 0.63
SMARCE1-205ENST00000431889 SNRPA1P09661 255 aaKnown RBP18.97■□□□□ 0.63
SMARCE1-205ENST00000431889 CNBD1Q8NA66 436 aa18.97■□□□□ 0.63
SMARCE1-205ENST00000431889 SLX4Q8IY92 1834 aa18.96■□□□□ 0.63
SMARCE1-205ENST00000431889 LMNB1P20700 586 aa18.96■□□□□ 0.63
SMARCE1-205ENST00000431889 BRIP1Q9BX63 1249 aa18.96■□□□□ 0.63
SMARCE1-205ENST00000431889 PDE6BP35913 854 aa18.95■□□□□ 0.62
SMARCE1-205ENST00000431889 TNRC6CQ9HCJ0 1690 aaKnown RBP18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms