RNA–Protein interactions for RNA: ENST00000431352.1

SEC13-211, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 832 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-211ENST00000431352 DALRD3Q5D0E6 543 aaKnown RBP18.73■□□□□ 0.59
SEC13-211ENST00000431352 NPC1L1Q9UHC9 1359 aa18.72■□□□□ 0.59
SEC13-211ENST00000431352 HSPA6P17066 643 aa18.72■□□□□ 0.59
SEC13-211ENST00000431352 NFIXQ14938 502 aa18.72■□□□□ 0.59
SEC13-211ENST00000431352 UBR2Q8IWV8 1755 aa18.72■□□□□ 0.59
SEC13-211ENST00000431352 CEP350Q5VT06 3117 aa18.71■□□□□ 0.59
SEC13-211ENST00000431352 TM4SF1P30408 202 aa18.71■□□□□ 0.59
SEC13-211ENST00000431352 TEFQ10587 303 aa18.71■□□□□ 0.59
SEC13-211ENST00000431352 C9orf131Q5VYM1 1079 aa18.71■□□□□ 0.59
SEC13-211ENST00000431352 GAS2L2Q8NHY3 880 aa18.71■□□□□ 0.59
SEC13-211ENST00000431352 NARFQ9UHQ1 456 aa18.71■□□□□ 0.59
SEC13-211ENST00000431352 ZNF330Q9Y3S2 320 aaPredicted RBP18.71■□□□□ 0.59
SEC13-211ENST00000431352 ARFGEF1Q9Y6D6 1849 aa18.71■□□□□ 0.59
SEC13-211ENST00000431352 GNAT3A8MTJ3 354 aa18.7■□□□□ 0.58
SEC13-211ENST00000431352 BICDL1Q6ZP65 573 aa18.69■□□□□ 0.58
SEC13-211ENST00000431352 VSIG10Q8N0Z9 540 aa18.69■□□□□ 0.58
SEC13-211ENST00000431352 ZNF496Q96IT1 587 aaPredicted RBP18.69■□□□□ 0.58
SEC13-211ENST00000431352 BCL2L12Q9HB09 334 aa18.69■□□□□ 0.58
SEC13-211ENST00000431352 NMRK2Q9NPI5 230 aa18.69■□□□□ 0.58
SEC13-211ENST00000431352 STARD3NLO95772 234 aa18.68■□□□□ 0.58
SEC13-211ENST00000431352 IL17REQ8NFR9 667 aa18.68■□□□□ 0.58
SEC13-211ENST00000431352 AFDNP55196 1824 aaKnown RBP18.67■□□□□ 0.58
SEC13-211ENST00000431352 PRKAR2BP31323 418 aa18.67■□□□□ 0.58
SEC13-211ENST00000431352 ZNF790Q6PG37 636 aa18.67■□□□□ 0.58
SEC13-211ENST00000431352 CFAP53Q96M91 514 aa18.67■□□□□ 0.58
SEC13-211ENST00000431352 RNF181Q9P0P0 153 aa18.67■□□□□ 0.58
SEC13-211ENST00000431352 HEG1Q9ULI3 1381 aa18.67■□□□□ 0.58
SEC13-211ENST00000431352 SERPINB2P05120 415 aa18.66■□□□□ 0.58
SEC13-211ENST00000431352 PHACTR3Q96KR7 559 aa18.66■□□□□ 0.58
SEC13-211ENST00000431352 CARMIL3Q8ND23 1372 aa18.66■□□□□ 0.58
SEC13-211ENST00000431352 RASSF7Q02833 373 aa18.65■□□□□ 0.58
SEC13-211ENST00000431352 SIPA1L3O60292 1781 aaPredicted RBP18.65■□□□□ 0.58
SEC13-211ENST00000431352 NRXN2Q9P2S2 1712 aa18.64■□□□□ 0.57
SEC13-211ENST00000431352 RSPH6AQ9H0K4 717 aa18.64■□□□□ 0.57
SEC13-211ENST00000431352 SCN7AQ01118 1682 aa18.63■□□□□ 0.57
SEC13-211ENST00000431352 A0A087WZG4 1122 aa18.63■□□□□ 0.57
SEC13-211ENST00000431352 KCNQ3O43525 872 aa18.63■□□□□ 0.57
SEC13-211ENST00000431352 TOMM70O94826 608 aa18.63■□□□□ 0.57
SEC13-211ENST00000431352 EIF5P55010 431 aaKnown RBP18.63■□□□□ 0.57
SEC13-211ENST00000431352 C2CD5Q86YS7 1000 aa18.63■□□□□ 0.57
SEC13-211ENST00000431352 FMNL2Q96PY5 1086 aa18.63■□□□□ 0.57
SEC13-211ENST00000431352 TBC1D2BQ9UPU7 963 aa18.63■□□□□ 0.57
SEC13-211ENST00000431352 BTBD11A6QL63 1104 aa18.62■□□□□ 0.57
SEC13-211ENST00000431352 U2AF1L5P0DN76 240 aaPredicted RBP18.62■□□□□ 0.57
SEC13-211ENST00000431352 U2AF1Q01081 240 aaKnown RBP eCLIP18.62■□□□□ 0.57
SEC13-211ENST00000431352 TBC1D9BQ66K14 1250 aa18.62■□□□□ 0.57
SEC13-211ENST00000431352 CCDC24Q8N4L8 307 aa18.62■□□□□ 0.57
SEC13-211ENST00000431352 CEMIPQ8WUJ3 1361 aa18.61■□□□□ 0.57
SEC13-211ENST00000431352 PPP2R1AP30153 589 aa18.61■□□□□ 0.57
SEC13-211ENST00000431352 C16orf71Q8IYS4 520 aaPredicted RBP18.61■□□□□ 0.57
SEC13-211ENST00000431352 TEX13AQ9BXU3 409 aaPredicted RBP18.61■□□□□ 0.57
SEC13-211ENST00000431352 NUDCQ9Y266 331 aa18.61■□□□□ 0.57
SEC13-211ENST00000431352 KDM2BQ8NHM5 1336 aa18.6■□□□□ 0.57
SEC13-211ENST00000431352 H0YIN7 160 aa18.6■□□□□ 0.57
SEC13-211ENST00000431352 A1BGP04217 495 aa18.6■□□□□ 0.57
SEC13-211ENST00000431352 PIP4K2AP48426 406 aaPredicted RBP18.6■□□□□ 0.57
SEC13-211ENST00000431352 NPM2Q86SE8 214 aaKnown RBP18.6■□□□□ 0.57
SEC13-211ENST00000431352 DLEC1Q9Y238 1755 aa18.6■□□□□ 0.57
SEC13-211ENST00000431352 MCM10Q7L590 875 aa18.59■□□□□ 0.57
SEC13-211ENST00000431352 TTLL6Q8N841 843 aa18.59■□□□□ 0.57
SEC13-211ENST00000431352 NPHP1O15259 732 aa18.58■□□□□ 0.56
SEC13-211ENST00000431352 IL6STP40189 918 aaPredicted RBP18.58■□□□□ 0.56
SEC13-211ENST00000431352 APLP1P51693 650 aa18.58■□□□□ 0.56
SEC13-211ENST00000431352 RTF1Q92541 710 aaKnown RBP18.58■□□□□ 0.56
SEC13-211ENST00000431352 ZNF219Q9P2Y4 722 aaPredicted RBP18.58■□□□□ 0.56
SEC13-211ENST00000431352 DCTN1Q14203 1278 aa18.57■□□□□ 0.56
SEC13-211ENST00000431352 ZNF622Q969S3 477 aaKnown RBP eCLIP18.57■□□□□ 0.56
SEC13-211ENST00000431352 RRAGCQ9HB90 399 aa18.57■□□□□ 0.56
SEC13-211ENST00000431352 SBF1O95248 1867 aa18.56■□□□□ 0.56
SEC13-211ENST00000431352 ANKRD31Q8N7Z5 1873 aa18.56■□□□□ 0.56
SEC13-211ENST00000431352 PRAMEF22A3QJZ6 481 aa18.56■□□□□ 0.56
SEC13-211ENST00000431352 PRR5LQ6MZQ0 368 aa18.56■□□□□ 0.56
SEC13-211ENST00000431352 COL11A2P13942 1736 aaPredicted RBP18.55■□□□□ 0.56
SEC13-211ENST00000431352 TNRC6CQ9HCJ0 1690 aaKnown RBP18.55■□□□□ 0.56
SEC13-211ENST00000431352 CAMTA2O94983 1202 aa18.55■□□□□ 0.56
SEC13-211ENST00000431352 LMNB1P20700 586 aa18.55■□□□□ 0.56
SEC13-211ENST00000431352 PRELPP51888 382 aa18.55■□□□□ 0.56
SEC13-211ENST00000431352 DZIP3Q86Y13 1208 aaKnown RBP18.55■□□□□ 0.56
SEC13-211ENST00000431352 CNBD1Q8NA66 436 aa18.55■□□□□ 0.56
SEC13-211ENST00000431352 RBM46Q8TBY0 533 aaKnown RBP18.55■□□□□ 0.56
SEC13-211ENST00000431352 USP16Q9Y5T5 823 aa18.55■□□□□ 0.56
SEC13-211ENST00000431352 PDE6BP35913 854 aa18.54■□□□□ 0.56
SEC13-211ENST00000431352 SETDB2Q96T68 719 aa18.54■□□□□ 0.56
SEC13-211ENST00000431352 TIAM2Q8IVF5 1701 aa18.54■□□□□ 0.56
SEC13-211ENST00000431352 BCORQ6W2J9 1755 aa18.53■□□□□ 0.56
SEC13-211ENST00000431352 NFKBIEO00221 500 aa18.53■□□□□ 0.56
SEC13-211ENST00000431352 HTRA3P83110 453 aa18.53■□□□□ 0.56
SEC13-211ENST00000431352 BRIP1Q9BX63 1249 aa18.53■□□□□ 0.56
SEC13-211ENST00000431352 C21orf2O43822 256 aa18.52■□□□□ 0.56
SEC13-211ENST00000431352 SNRPA1P09661 255 aaKnown RBP18.51■□□□□ 0.55
SEC13-211ENST00000431352 ST5P78524 1137 aa18.51■□□□□ 0.55
SEC13-211ENST00000431352 WDR90Q96KV7 1748 aa18.51■□□□□ 0.55
SEC13-211ENST00000431352 ZC3H4Q9UPT8 1303 aaKnown RBP18.5■□□□□ 0.55
SEC13-211ENST00000431352 MIS18AQ9NYP9 233 aa18.5■□□□□ 0.55
SEC13-211ENST00000431352 FSTL1Q12841 308 aa18.49■□□□□ 0.55
SEC13-211ENST00000431352 NBPF5PQ86XG9 351 aaPredicted RBP18.49■□□□□ 0.55
SEC13-211ENST00000431352 NEFMP07197 916 aa18.48■□□□□ 0.55
SEC13-211ENST00000431352 PDZRN3Q9UPQ7 1066 aa18.48■□□□□ 0.55
SEC13-211ENST00000431352 ZNF652Q9Y2D9 606 aa18.48■□□□□ 0.55
SEC13-211ENST00000431352 CACNA1SQ13698 1873 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms