RNA–Protein interactions for RNA: ENST00000431212.6

NEDD4L-206, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4L, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-206ENST00000431212 LARP6Q9BRS8 491 aaKnown RBP12.34□□□□□ -0.43
NEDD4L-206ENST00000431212 SNX14Q9Y5W7 946 aa12.34□□□□□ -0.43
NEDD4L-206ENST00000431212 RAD50Q92878 1312 aa12.34□□□□□ -0.43
NEDD4L-206ENST00000431212 RTF1Q92541 710 aaKnown RBP12.33□□□□□ -0.44
NEDD4L-206ENST00000431212 TTC14Q96N46 770 aa12.33□□□□□ -0.44
NEDD4L-206ENST00000431212 DNM1Q05193 864 aaKnown RBP12.33□□□□□ -0.44
NEDD4L-206ENST00000431212 RUFY3Q7L099 469 aa12.33□□□□□ -0.44
NEDD4L-206ENST00000431212 FEZ1Q99689 392 aa12.33□□□□□ -0.44
NEDD4L-206ENST00000431212 IL1RAPL2Q9NP60 686 aa12.33□□□□□ -0.44
NEDD4L-206ENST00000431212 A0A0U1RQG5 324 aaPredicted RBP12.32□□□□□ -0.44
NEDD4L-206ENST00000431212 NUDT16Q96DE0 195 aaKnown RBP12.32□□□□□ -0.44
NEDD4L-206ENST00000431212 SGSM2O43147 1006 aa12.32□□□□□ -0.44
NEDD4L-206ENST00000431212 MAP4K4O95819 1239 aaPredicted RBP12.32□□□□□ -0.44
NEDD4L-206ENST00000431212 CRB1P82279 1406 aa12.32□□□□□ -0.44
NEDD4L-206ENST00000431212 NUTM1Q86Y26 1132 aa12.32□□□□□ -0.44
NEDD4L-206ENST00000431212 LRRFIP2Q9Y608 721 aaKnown RBP12.32□□□□□ -0.44
NEDD4L-206ENST00000431212 DLC1Q96QB1 1528 aa12.31□□□□□ -0.44
NEDD4L-206ENST00000431212 GJB2P29033 226 aa12.31□□□□□ -0.44
NEDD4L-206ENST00000431212 FLIIQ13045 1269 aa12.31□□□□□ -0.44
NEDD4L-206ENST00000431212 FAM200AQ8TCP9 573 aa12.31□□□□□ -0.44
NEDD4L-206ENST00000431212 CCDC61Q9Y6R9 512 aa12.31□□□□□ -0.44
NEDD4L-206ENST00000431212 PTGS1P23219 599 aa12.31□□□□□ -0.44
NEDD4L-206ENST00000431212 TUBGCP6Q96RT7 1819 aa12.31□□□□□ -0.44
NEDD4L-206ENST00000431212 FBXO31Q5XUX0 539 aaPredicted RBP12.31□□□□□ -0.44
NEDD4L-206ENST00000431212 DRC7Q8IY82 874 aa12.31□□□□□ -0.44
NEDD4L-206ENST00000431212 RASEFQ8IZ41 740 aa12.31□□□□□ -0.44
NEDD4L-206ENST00000431212 CPS1P31327 1500 aa12.3□□□□□ -0.44
NEDD4L-206ENST00000431212 ARHGEF10O15013 1369 aa12.3□□□□□ -0.44
NEDD4L-206ENST00000431212 NCKAP5LQ9HCH0 1330 aa12.3□□□□□ -0.44
NEDD4L-206ENST00000431212 VPS37CA5D8V6 355 aaPredicted RBP12.3□□□□□ -0.44
NEDD4L-206ENST00000431212 CASTP20810 708 aaKnown RBP12.3□□□□□ -0.44
NEDD4L-206ENST00000431212 CCDC83Q8IWF9 413 aa12.3□□□□□ -0.44
NEDD4L-206ENST00000431212 LSG1Q9H089 658 aaKnown RBP12.3□□□□□ -0.44
NEDD4L-206ENST00000431212 OGFRQ9NZT2 677 aa12.3□□□□□ -0.44
NEDD4L-206ENST00000431212 MTMR6Q9Y217 621 aa12.3□□□□□ -0.44
NEDD4L-206ENST00000431212 MAP3K11Q16584 847 aa12.3□□□□□ -0.44
NEDD4L-206ENST00000431212 CNTROBQ8N137 903 aa12.3□□□□□ -0.44
NEDD4L-206ENST00000431212 SOS1Q07889 1333 aaPredicted RBP12.29□□□□□ -0.44
NEDD4L-206ENST00000431212 CCDC30Q5VVM6 783 aa12.29□□□□□ -0.44
NEDD4L-206ENST00000431212 RAB11FIP3O75154 756 aa12.29□□□□□ -0.44
NEDD4L-206ENST00000431212 UBTFL1P0CB47 393 aaPredicted RBP12.29□□□□□ -0.44
NEDD4L-206ENST00000431212 ZSCAN31Q96LW9 406 aaPredicted RBP12.29□□□□□ -0.44
NEDD4L-206ENST00000431212 NUP62CLQ9H1M0 184 aa12.29□□□□□ -0.44
NEDD4L-206ENST00000431212 PREX1Q8TCU6 1659 aa12.29□□□□□ -0.44
NEDD4L-206ENST00000431212 SURF6O75683 361 aaKnown RBP12.29□□□□□ -0.44
NEDD4L-206ENST00000431212 NCBP1Q09161 790 aaKnown RBP12.29□□□□□ -0.44
NEDD4L-206ENST00000431212 SYCP1Q15431 976 aa12.29□□□□□ -0.44
NEDD4L-206ENST00000431212 CCDC186Q7Z3E2 898 aa12.29□□□□□ -0.44
NEDD4L-206ENST00000431212 HYPKQ9NX55 129 aa12.29□□□□□ -0.44
NEDD4L-206ENST00000431212 CHMP3Q9Y3E7 222 aa12.29□□□□□ -0.44
NEDD4L-206ENST00000431212 SMTNL1A8MU46 457 aa12.28□□□□□ -0.44
NEDD4L-206ENST00000431212 CPA1P15085 419 aa12.28□□□□□ -0.44
NEDD4L-206ENST00000431212 TYRO3Q06418 890 aa12.28□□□□□ -0.44
NEDD4L-206ENST00000431212 HSP90AB2PQ58FF8 381 aa12.28□□□□□ -0.44
NEDD4L-206ENST00000431212 CWC27Q6UX04 472 aaKnown RBP12.28□□□□□ -0.44
NEDD4L-206ENST00000431212 ZNF771Q7L3S4 317 aaPredicted RBP12.28□□□□□ -0.44
NEDD4L-206ENST00000431212 C16orf45Q96MC5 204 aaPredicted RBP12.28□□□□□ -0.44
NEDD4L-206ENST00000431212 SH2B1Q9NRF2 756 aaPredicted RBP12.28□□□□□ -0.44
NEDD4L-206ENST00000431212 DIP2CQ9Y2E4 1556 aa12.28□□□□□ -0.44
NEDD4L-206ENST00000431212 FOXO3O43524 673 aa12.28□□□□□ -0.44
NEDD4L-206ENST00000431212 IGSF3O75054 1194 aa12.28□□□□□ -0.44
NEDD4L-206ENST00000431212 LARGE1O95461 756 aa12.28□□□□□ -0.44
NEDD4L-206ENST00000431212 KRT85P78386 507 aa12.28□□□□□ -0.44
NEDD4L-206ENST00000431212 CAMK4Q16566 473 aa12.28□□□□□ -0.44
NEDD4L-206ENST00000431212 LUZP1Q86V48 1076 aa12.28□□□□□ -0.44
NEDD4L-206ENST00000431212 PDRG1Q9NUG6 133 aa12.28□□□□□ -0.44
NEDD4L-206ENST00000431212 SPG7Q9UQ90 795 aa12.28□□□□□ -0.44
NEDD4L-206ENST00000431212 PI4K2BQ8TCG2 481 aa12.27□□□□□ -0.44
NEDD4L-206ENST00000431212 NECTIN2Q92692 538 aa12.27□□□□□ -0.44
NEDD4L-206ENST00000431212 TNNT1P13805 278 aa12.27□□□□□ -0.45
NEDD4L-206ENST00000431212 VPS53Q5VIR6 699 aa12.27□□□□□ -0.45
NEDD4L-206ENST00000431212 SSH3Q8TE77 659 aa12.27□□□□□ -0.45
NEDD4L-206ENST00000431212 PAXBP1Q9Y5B6 917 aa12.27□□□□□ -0.45
NEDD4L-206ENST00000431212 MRVI1Q9Y6F6 885 aa12.27□□□□□ -0.45
NEDD4L-206ENST00000431212 NRKQ7Z2Y5 1582 aa12.27□□□□□ -0.45
NEDD4L-206ENST00000431212 MTHFSDQ2M296 383 aaKnown RBP12.27□□□□□ -0.45
NEDD4L-206ENST00000431212 TAF3Q5VWG9 929 aa12.27□□□□□ -0.45
NEDD4L-206ENST00000431212 RHPN1Q8TCX5 695 aa12.27□□□□□ -0.45
NEDD4L-206ENST00000431212 JAKMIP1Q96N16 626 aaKnown RBP12.27□□□□□ -0.45
NEDD4L-206ENST00000431212 TRIM5Q9C035 493 aa12.27□□□□□ -0.45
NEDD4L-206ENST00000431212 USP44Q9H0E7 712 aa12.27□□□□□ -0.45
NEDD4L-206ENST00000431212 CGNQ9P2M7 1197 aaKnown RBP12.27□□□□□ -0.45
NEDD4L-206ENST00000431212 GOLGA6L4A6NEF3 574 aa12.26□□□□□ -0.45
NEDD4L-206ENST00000431212 DTNBO60941 627 aa12.26□□□□□ -0.45
NEDD4L-206ENST00000431212 TXNDC2Q86VQ3 553 aa12.26□□□□□ -0.45
NEDD4L-206ENST00000431212 CCDC112Q8NEF3 446 aa12.26□□□□□ -0.45
NEDD4L-206ENST00000431212 TNMDQ9H2S6 317 aa12.26□□□□□ -0.45
NEDD4L-206ENST00000431212 CYP46A1Q9Y6A2 500 aa12.26□□□□□ -0.45
NEDD4L-206ENST00000431212 LRMPQ12912 555 aa12.26□□□□□ -0.45
NEDD4L-206ENST00000431212 RUFY2Q8WXA3 655 aa12.26□□□□□ -0.45
NEDD4L-206ENST00000431212 PDIA4P13667 645 aaKnown RBP12.26□□□□□ -0.45
NEDD4L-206ENST00000431212 ANO6Q4KMQ2 910 aa12.26□□□□□ -0.45
NEDD4L-206ENST00000431212 LARP1BQ659C4 914 aaKnown RBP12.26□□□□□ -0.45
NEDD4L-206ENST00000431212 PPP1R42Q7Z4L9 355 aa12.26□□□□□ -0.45
NEDD4L-206ENST00000431212 TTC6Q86TZ1 520 aa12.26□□□□□ -0.45
NEDD4L-206ENST00000431212 KIF1BPQ96EK5 621 aa12.26□□□□□ -0.45
NEDD4L-206ENST00000431212 CTNNA3Q9UI47 895 aa12.26□□□□□ -0.45
NEDD4L-206ENST00000431212 CKAP2LQ8IYA6 745 aa12.25□□□□□ -0.45
NEDD4L-206ENST00000431212 TTC21BQ7Z4L5 1316 aa12.25□□□□□ -0.45
NEDD4L-206ENST00000431212 LIG1P18858 919 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms