RNA–Protein interactions for RNA: ENST00000431183.6

SMPD4-205, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-205ENST00000431183 EP400Q96L91 3159 aa14.04□□□□□ -0.16
SMPD4-205ENST00000431183 PCDH11XQ9BZA7 1347 aa14.04□□□□□ -0.16
SMPD4-205ENST00000431183 PCDH11YQ9BZA8 1340 aa14.04□□□□□ -0.16
SMPD4-205ENST00000431183 PTF1AQ7RTS3 328 aa14.03□□□□□ -0.16
SMPD4-205ENST00000431183 SIRT2Q8IXJ6 389 aa14.03□□□□□ -0.16
SMPD4-205ENST00000431183 HSP90AB1P08238 724 aaKnown RBP14.03□□□□□ -0.16
SMPD4-205ENST00000431183 DDX58O95786 925 aaKnown RBP14.02□□□□□ -0.17
SMPD4-205ENST00000431183 CERKQ8TCT0 537 aa14.02□□□□□ -0.17
SMPD4-205ENST00000431183 UBE2Q2Q8WVN8 375 aa14.02□□□□□ -0.17
SMPD4-205ENST00000431183 STRCQ7RTU9 1775 aa14.02□□□□□ -0.17
SMPD4-205ENST00000431183 KDM2BQ8NHM5 1336 aa14.02□□□□□ -0.17
SMPD4-205ENST00000431183 FAM161AQ3B820 660 aa14.02□□□□□ -0.17
SMPD4-205ENST00000431183 PHF14O94880 888 aa14.01□□□□□ -0.17
SMPD4-205ENST00000431183 CCT4P50991 539 aaKnown RBP14.01□□□□□ -0.17
SMPD4-205ENST00000431183 ANKRD13DQ6ZTN6 518 aa14.01□□□□□ -0.17
SMPD4-205ENST00000431183 PPP1R42Q7Z4L9 355 aa14.01□□□□□ -0.17
SMPD4-205ENST00000431183 CHD1LQ86WJ1 897 aa14.01□□□□□ -0.17
SMPD4-205ENST00000431183 MED1Q15648 1581 aaPredicted RBP14.01□□□□□ -0.17
SMPD4-205ENST00000431183 TOPAZ1Q8N9V7 1692 aa14.01□□□□□ -0.17
SMPD4-205ENST00000431183 CAMTA1Q9Y6Y1 1673 aa14□□□□□ -0.17
SMPD4-205ENST00000431183 A0A087WZG4 1122 aa14□□□□□ -0.17
SMPD4-205ENST00000431183 ATP6V1AP38606 617 aa14□□□□□ -0.17
SMPD4-205ENST00000431183 HMMRO75330 724 aa14□□□□□ -0.17
SMPD4-205ENST00000431183 USP44Q9H0E7 712 aa14□□□□□ -0.17
SMPD4-205ENST00000431183 FOXD4L1Q9NU39 408 aa14□□□□□ -0.17
SMPD4-205ENST00000431183 ANKRD26Q9UPS8 1709 aa13.99□□□□□ -0.17
SMPD4-205ENST00000431183 NFAT5O94916 1531 aa13.99□□□□□ -0.17
SMPD4-205ENST00000431183 CEP85Q6P2H3 762 aa13.99□□□□□ -0.17
SMPD4-205ENST00000431183 UPF2Q9HAU5 1272 aaKnown RBP13.99□□□□□ -0.17
SMPD4-205ENST00000431183 SYNE4Q8N205 404 aa13.99□□□□□ -0.17
SMPD4-205ENST00000431183 BACH2Q9BYV9 841 aa13.99□□□□□ -0.17
SMPD4-205ENST00000431183 CHMP4BQ9H444 224 aaKnown RBP13.98□□□□□ -0.17
SMPD4-205ENST00000431183 RGPD2P0DJD1 1756 aa13.98□□□□□ -0.17
SMPD4-205ENST00000431183 PTPRCP08575 1304 aa13.98□□□□□ -0.17
SMPD4-205ENST00000431183 GNAI3P08754 354 aa13.98□□□□□ -0.17
SMPD4-205ENST00000431183 NOL8Q76FK4 1167 aaKnown RBP13.98□□□□□ -0.17
SMPD4-205ENST00000431183 DCCP43146 1447 aa13.98□□□□□ -0.17
SMPD4-205ENST00000431183 KIF24Q5T7B8 1368 aa13.98□□□□□ -0.17
SMPD4-205ENST00000431183 GTF2E1P29083 439 aaPredicted RBP13.98□□□□□ -0.17
SMPD4-205ENST00000431183 LTN1O94822 1766 aa13.98□□□□□ -0.17
SMPD4-205ENST00000431183 ABCC4O15439 1325 aa13.97□□□□□ -0.17
SMPD4-205ENST00000431183 NRKQ7Z2Y5 1582 aa13.97□□□□□ -0.17
SMPD4-205ENST00000431183 ARHGAP45Q92619 1136 aa13.97□□□□□ -0.17
SMPD4-205ENST00000431183 TAOK2Q9UL54 1235 aa13.97□□□□□ -0.17
SMPD4-205ENST00000431183 FAM89AQ96GI7 184 aa13.97□□□□□ -0.17
SMPD4-205ENST00000431183 DDX21Q9NR30 783 aaKnown RBP eCLIP13.97□□□□□ -0.17
SMPD4-205ENST00000431183 TAF7LQ5H9L4 462 aa13.96□□□□□ -0.17
SMPD4-205ENST00000431183 KSR2Q6VAB6 950 aa13.96□□□□□ -0.17
SMPD4-205ENST00000431183 HYPKQ9NX55 129 aa13.96□□□□□ -0.17
SMPD4-205ENST00000431183 INTS3Q68E01 1043 aaKnown RBP13.96□□□□□ -0.17
SMPD4-205ENST00000431183 NEUROD6Q96NK8 337 aa13.96□□□□□ -0.17
SMPD4-205ENST00000431183 CCDC8Q9H0W5 538 aaPredicted RBP13.96□□□□□ -0.17
SMPD4-205ENST00000431183 NDUFB9Q9Y6M9 179 aa13.96□□□□□ -0.17
SMPD4-205ENST00000431183 MARCH10Q8NA82 808 aaPredicted RBP13.96□□□□□ -0.18
SMPD4-205ENST00000431183 SLKQ9H2G2 1235 aaPredicted RBP13.96□□□□□ -0.18
SMPD4-205ENST00000431183 ZBTB1Q9Y2K1 713 aa13.95□□□□□ -0.18
SMPD4-205ENST00000431183 KDM6AO15550 1401 aaPredicted RBP13.95□□□□□ -0.18
SMPD4-205ENST00000431183 NBPF26B4DH59 902 aa13.95□□□□□ -0.18
SMPD4-205ENST00000431183 NBPF14Q5TI25 921 aa13.95□□□□□ -0.18
SMPD4-205ENST00000431183 NBPF10Q6P3W6 841 aaKnown RBP13.95□□□□□ -0.18
SMPD4-205ENST00000431183 NBPF15Q8N660 670 aa13.95□□□□□ -0.18
SMPD4-205ENST00000431183 WWC3Q9ULE0 1092 aa13.95□□□□□ -0.18
SMPD4-205ENST00000431183 RGPD5Q99666 1765 aa13.94□□□□□ -0.18
SMPD4-205ENST00000431183 DLG5Q8TDM6 1919 aa13.94□□□□□ -0.18
SMPD4-205ENST00000431183 STARD3NLO95772 234 aa13.94□□□□□ -0.18
SMPD4-205ENST00000431183 BICC1Q9H694 974 aaKnown RBP13.94□□□□□ -0.18
SMPD4-205ENST00000431183 ATG3Q9NT62 314 aa13.94□□□□□ -0.18
SMPD4-205ENST00000431183 ZNF594Q96JF6 807 aaPredicted RBP13.94□□□□□ -0.18
SMPD4-205ENST00000431183 COL5A2P05997 1499 aaPredicted RBP13.94□□□□□ -0.18
SMPD4-205ENST00000431183 UTRNP46939 3433 aa13.94□□□□□ -0.18
SMPD4-205ENST00000431183 SUCLG2Q96I99 432 aa13.94□□□□□ -0.18
SMPD4-205ENST00000431183 QTRT2Q9H974 415 aaKnown RBP13.94□□□□□ -0.18
SMPD4-205ENST00000431183 AFF2P51816 1311 aa13.93□□□□□ -0.18
SMPD4-205ENST00000431183 CEMIPQ8WUJ3 1361 aa13.93□□□□□ -0.18
SMPD4-205ENST00000431183 UNC5CLQ8IV45 518 aa13.93□□□□□ -0.18
SMPD4-205ENST00000431183 ANKRD44Q8N8A2 993 aa13.93□□□□□ -0.18
SMPD4-205ENST00000431183 TPRNQ4KMQ1 711 aa13.93□□□□□ -0.18
SMPD4-205ENST00000431183 KIF6Q6ZMV9 814 aa13.93□□□□□ -0.18
SMPD4-205ENST00000431183 BEND3Q5T5X7 828 aa13.92□□□□□ -0.18
SMPD4-205ENST00000431183 NWD1Q149M9 1564 aa13.92□□□□□ -0.18
SMPD4-205ENST00000431183 GRM8O00222 908 aa13.92□□□□□ -0.18
SMPD4-205ENST00000431183 C8orf34Q49A92 452 aa13.92□□□□□ -0.18
SMPD4-205ENST00000431183 G3BP1Q13283 466 aaKnown RBP eCLIP13.92□□□□□ -0.184e-7■□□□□ 10.4
SMPD4-205ENST00000431183 LMBR1LQ6UX01 489 aa13.92□□□□□ -0.18
SMPD4-205ENST00000431183 NCBP3Q53F19 620 aaKnown RBP13.91□□□□□ -0.18
SMPD4-205ENST00000431183 LRRCC1Q9C099 1032 aa13.91□□□□□ -0.18
SMPD4-205ENST00000431183 BRPF3Q9ULD4 1205 aa13.91□□□□□ -0.18
SMPD4-205ENST00000431183 HDAC1Q13547 482 aaPredicted RBP13.91□□□□□ -0.18
SMPD4-205ENST00000431183 RPAP2Q8IXW5 612 aaPredicted RBP13.91□□□□□ -0.18
SMPD4-205ENST00000431183 NCOA3Q9Y6Q9 1424 aa13.91□□□□□ -0.18
SMPD4-205ENST00000431183 IGKV5-2P06315 115 aa13.91□□□□□ -0.18
SMPD4-205ENST00000431183 NUCB1Q02818 461 aa13.91□□□□□ -0.18
SMPD4-205ENST00000431183 EPHA10Q5JZY3 1008 aa13.91□□□□□ -0.18
SMPD4-205ENST00000431183 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.91□□□□□ -0.18
SMPD4-205ENST00000431183 HSP90AA1P07900 732 aaKnown RBP13.9□□□□□ -0.18
SMPD4-205ENST00000431183 PDIA6Q15084 440 aa13.9□□□□□ -0.18
SMPD4-205ENST00000431183 HLFQ16534 295 aa13.9□□□□□ -0.18
SMPD4-205ENST00000431183 CPDO75976 1380 aa13.9□□□□□ -0.18
SMPD4-205ENST00000431183 DTNBO60941 627 aa13.9□□□□□ -0.18
SMPD4-205ENST00000431183 AACSQ86V21 672 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 240.5 ms