RNA–Protein interactions for RNA: ENST00000431116.2

HMGN1P38-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 38, humanhuman

BASIC

Gene HMGN1P38, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P38-201ENST00000431116 PHACTR3Q96KR7 559 aa13.6□□□□□ -0.23
HMGN1P38-201ENST00000431116 RSPH6AQ9H0K4 717 aa13.6□□□□□ -0.23
HMGN1P38-201ENST00000431116 NUDCQ9Y266 331 aa13.6□□□□□ -0.23
HMGN1P38-201ENST00000431116 AFDNP55196 1824 aaKnown RBP13.6□□□□□ -0.23
HMGN1P38-201ENST00000431116 ARFGEF1Q9Y6D6 1849 aa13.6□□□□□ -0.23
HMGN1P38-201ENST00000431116 GOLGB1Q14789 3259 aaKnown RBP13.59□□□□□ -0.23
HMGN1P38-201ENST00000431116 U2AF1L5P0DN76 240 aaPredicted RBP13.59□□□□□ -0.23
HMGN1P38-201ENST00000431116 TGFB2P61812 414 aa13.59□□□□□ -0.23
HMGN1P38-201ENST00000431116 U2AF1Q01081 240 aaKnown RBP eCLIP13.59□□□□□ -0.23
HMGN1P38-201ENST00000431116 DDR1Q08345 913 aa13.59□□□□□ -0.23
HMGN1P38-201ENST00000431116 FKBP8Q14318 412 aa13.59□□□□□ -0.23
HMGN1P38-201ENST00000431116 VSIG10Q8N0Z9 540 aa13.59□□□□□ -0.23
HMGN1P38-201ENST00000431116 IL17REQ8NFR9 667 aa13.59□□□□□ -0.23
HMGN1P38-201ENST00000431116 ZBTB1Q9Y2K1 713 aa13.59□□□□□ -0.23
HMGN1P38-201ENST00000431116 ADCY9O60503 1353 aa13.58□□□□□ -0.23
HMGN1P38-201ENST00000431116 A0A0G2JLW4 131 aa13.58□□□□□ -0.24
HMGN1P38-201ENST00000431116 ZPR1O75312 459 aa13.58□□□□□ -0.24
HMGN1P38-201ENST00000431116 GIGYF1O75420 1035 aaPredicted RBP13.58□□□□□ -0.24
HMGN1P38-201ENST00000431116 USPL1Q5W0Q7 1092 aa13.58□□□□□ -0.24
HMGN1P38-201ENST00000431116 SCN7AQ01118 1682 aa13.58□□□□□ -0.24
HMGN1P38-201ENST00000431116 CEMIPQ8WUJ3 1361 aa13.58□□□□□ -0.24
HMGN1P38-201ENST00000431116 DLG5Q8TDM6 1919 aa13.57□□□□□ -0.24
HMGN1P38-201ENST00000431116 DPEP1P16444 411 aa13.57□□□□□ -0.24
HMGN1P38-201ENST00000431116 ZNF790Q6PG37 636 aa13.57□□□□□ -0.24
HMGN1P38-201ENST00000431116 ZNF496Q96IT1 587 aaPredicted RBP13.57□□□□□ -0.24
HMGN1P38-201ENST00000431116 BCS1LQ9Y276 419 aa13.57□□□□□ -0.24
HMGN1P38-201ENST00000431116 HEG1Q9ULI3 1381 aa13.57□□□□□ -0.24
HMGN1P38-201ENST00000431116 NRXN2Q9P2S2 1712 aa13.56□□□□□ -0.24
HMGN1P38-201ENST00000431116 CANXP27824 592 aaKnown RBP13.56□□□□□ -0.24
HMGN1P38-201ENST00000431116 NARFQ9UHQ1 456 aa13.56□□□□□ -0.24
HMGN1P38-201ENST00000431116 DLEC1Q9Y238 1755 aa13.55□□□□□ -0.24
HMGN1P38-201ENST00000431116 POLRMTO00411 1230 aaKnown RBP13.55□□□□□ -0.24
HMGN1P38-201ENST00000431116 STARD3NLO95772 234 aa13.55□□□□□ -0.24
HMGN1P38-201ENST00000431116 C1QTNF8P60827 252 aa13.55□□□□□ -0.24
HMGN1P38-201ENST00000431116 BCORQ6W2J9 1755 aa13.54□□□□□ -0.24
HMGN1P38-201ENST00000431116 FCHSD2O94868 740 aa13.54□□□□□ -0.24
HMGN1P38-201ENST00000431116 FMNL2Q96PY5 1086 aa13.54□□□□□ -0.24
HMGN1P38-201ENST00000431116 BTBD11A6QL63 1104 aa13.53□□□□□ -0.24
HMGN1P38-201ENST00000431116 TM4SF1P30408 202 aa13.53□□□□□ -0.24
HMGN1P38-201ENST00000431116 NFIXQ14938 502 aa13.53□□□□□ -0.24
HMGN1P38-201ENST00000431116 MCM10Q7L590 875 aa13.53□□□□□ -0.24
HMGN1P38-201ENST00000431116 ZNF526Q8TF50 670 aaPredicted RBP13.53□□□□□ -0.24
HMGN1P38-201ENST00000431116 RTF1Q92541 710 aaKnown RBP13.53□□□□□ -0.24
HMGN1P38-201ENST00000431116 GPBP1L1Q9HC44 474 aaPredicted RBP13.53□□□□□ -0.24
HMGN1P38-201ENST00000431116 ZNF330Q9Y3S2 320 aaPredicted RBP13.53□□□□□ -0.24
HMGN1P38-201ENST00000431116 A0A087WZG4 1122 aa13.52□□□□□ -0.25
HMGN1P38-201ENST00000431116 SENP3-EIF4A1A0A087X0R7 540 aa13.52□□□□□ -0.25
HMGN1P38-201ENST00000431116 KCNQ3O43525 872 aa13.52□□□□□ -0.25
HMGN1P38-201ENST00000431116 EIF5P55010 431 aaKnown RBP13.52□□□□□ -0.25
HMGN1P38-201ENST00000431116 TEX13AQ9BXU3 409 aaPredicted RBP13.52□□□□□ -0.25
HMGN1P38-201ENST00000431116 BCL2L12Q9HB09 334 aa13.52□□□□□ -0.25
HMGN1P38-201ENST00000431116 PIM2Q9P1W9 311 aa13.52□□□□□ -0.25
HMGN1P38-201ENST00000431116 LAMB4A4D0S4 1761 aa13.52□□□□□ -0.25
HMGN1P38-201ENST00000431116 ANKRD31Q8N7Z5 1873 aa13.51□□□□□ -0.25
HMGN1P38-201ENST00000431116 KCNA3P22001 575 aa13.51□□□□□ -0.25
HMGN1P38-201ENST00000431116 CHRNA5P30532 468 aa13.51□□□□□ -0.25
HMGN1P38-201ENST00000431116 ARHGAP27Q6ZUM4 889 aa13.51□□□□□ -0.25
HMGN1P38-201ENST00000431116 KDM3BQ7LBC6 1761 aa13.5□□□□□ -0.25
HMGN1P38-201ENST00000431116 DCTN1Q14203 1278 aa13.5□□□□□ -0.25
HMGN1P38-201ENST00000431116 DALRD3Q5D0E6 543 aaKnown RBP13.5□□□□□ -0.25
HMGN1P38-201ENST00000431116 BICDL1Q6ZP65 573 aa13.5□□□□□ -0.25
HMGN1P38-201ENST00000431116 CARMIL3Q8ND23 1372 aa13.49□□□□□ -0.25
HMGN1P38-201ENST00000431116 SERPINB2P05120 415 aa13.49□□□□□ -0.25
HMGN1P38-201ENST00000431116 NEFMP07197 916 aa13.49□□□□□ -0.25
HMGN1P38-201ENST00000431116 IL6STP40189 918 aaPredicted RBP13.49□□□□□ -0.25
HMGN1P38-201ENST00000431116 TBC1D2BQ9UPU7 963 aa13.49□□□□□ -0.25
HMGN1P38-201ENST00000431116 COL11A2P13942 1736 aaPredicted RBP13.49□□□□□ -0.25
HMGN1P38-201ENST00000431116 SBF1O95248 1867 aa13.48□□□□□ -0.25
HMGN1P38-201ENST00000431116 HTATSF1O43719 755 aaKnown RBP13.48□□□□□ -0.25
HMGN1P38-201ENST00000431116 A1BGP04217 495 aa13.48□□□□□ -0.25
HMGN1P38-201ENST00000431116 NPM2Q86SE8 214 aaKnown RBP13.48□□□□□ -0.25
HMGN1P38-201ENST00000431116 CACNA1SQ13698 1873 aa13.47□□□□□ -0.25
HMGN1P38-201ENST00000431116 PRAMEF22A3QJZ6 481 aa13.47□□□□□ -0.25
HMGN1P38-201ENST00000431116 PIP4K2AP48426 406 aaPredicted RBP13.47□□□□□ -0.25
HMGN1P38-201ENST00000431116 TBC1D9BQ66K14 1250 aa13.47□□□□□ -0.25
HMGN1P38-201ENST00000431116 SNRPA1P09661 255 aaKnown RBP13.46□□□□□ -0.25
HMGN1P38-201ENST00000431116 USP16Q9Y5T5 823 aa13.46□□□□□ -0.25
HMGN1P38-201ENST00000431116 MAPK8IP3Q9UPT6 1336 aa13.45□□□□□ -0.26
HMGN1P38-201ENST00000431116 CAMTA2O94983 1202 aa13.45□□□□□ -0.26
HMGN1P38-201ENST00000431116 C9orf131Q5VYM1 1079 aa13.45□□□□□ -0.26
HMGN1P38-201ENST00000431116 DZIP3Q86Y13 1208 aaKnown RBP13.45□□□□□ -0.26
HMGN1P38-201ENST00000431116 C2CD5Q86YS7 1000 aa13.45□□□□□ -0.26
HMGN1P38-201ENST00000431116 PLEKHF1Q96S99 279 aa13.45□□□□□ -0.26
HMGN1P38-201ENST00000431116 TIAM2Q8IVF5 1701 aa13.44□□□□□ -0.26
HMGN1P38-201ENST00000431116 CCDC88AQ3V6T2 1871 aa13.44□□□□□ -0.26
HMGN1P38-201ENST00000431116 RALBP1Q15311 655 aa13.44□□□□□ -0.26
HMGN1P38-201ENST00000431116 TAF7Q15545 349 aaPredicted RBP13.44□□□□□ -0.26
HMGN1P38-201ENST00000431116 NFE2L2Q16236 605 aa13.44□□□□□ -0.26
HMGN1P38-201ENST00000431116 FOXD4L1Q9NU39 408 aa13.44□□□□□ -0.26
HMGN1P38-201ENST00000431116 MIS18AQ9NYP9 233 aa13.44□□□□□ -0.26
HMGN1P38-201ENST00000431116 H0YIN7 160 aa13.43□□□□□ -0.26
HMGN1P38-201ENST00000431116 MYCNP04198 464 aaPredicted RBP13.43□□□□□ -0.26
HMGN1P38-201ENST00000431116 PRR5LQ6MZQ0 368 aa13.43□□□□□ -0.26
HMGN1P38-201ENST00000431116 CNBD1Q8NA66 436 aa13.43□□□□□ -0.26
HMGN1P38-201ENST00000431116 THUMPD2Q9BTF0 503 aaKnown RBP13.43□□□□□ -0.26
HMGN1P38-201ENST00000431116 TNRC6CQ9HCJ0 1690 aaKnown RBP13.43□□□□□ -0.26
HMGN1P38-201ENST00000431116 ARFGEF2Q9Y6D5 1785 aa13.43□□□□□ -0.26
HMGN1P38-201ENST00000431116 NBPF26B4DH59 902 aa13.42□□□□□ -0.26
HMGN1P38-201ENST00000431116 KIF3CO14782 793 aa13.42□□□□□ -0.26
HMGN1P38-201ENST00000431116 NPHP1O15259 732 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms