RNA–Protein interactions for RNA: ENST00000430982.1

PTCD1-204, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-204ENST00000430982 MYH14Q7Z406 1995 aaKnown RBP20.23■□□□□ 0.83
PTCD1-204ENST00000430982 LGR6Q9HBX8 967 aa20.22■□□□□ 0.83
PTCD1-204ENST00000430982 SBF1O95248 1867 aa20.22■□□□□ 0.83
PTCD1-204ENST00000430982 RNMTO43148 476 aaKnown RBP20.21■□□□□ 0.83
PTCD1-204ENST00000430982 RPS6KA4O75676 772 aa20.2■□□□□ 0.82
PTCD1-204ENST00000430982 C16orf71Q8IYS4 520 aaPredicted RBP20.2■□□□□ 0.82
PTCD1-204ENST00000430982 NFATC2IPQ8NCF5 419 aa20.2■□□□□ 0.82
PTCD1-204ENST00000430982 KDM2BQ8NHM5 1336 aa20.2■□□□□ 0.82
PTCD1-204ENST00000430982 NEFMP07197 916 aa20.19■□□□□ 0.82
PTCD1-204ENST00000430982 PRELPP51888 382 aa20.19■□□□□ 0.82
PTCD1-204ENST00000430982 PARP3Q9Y6F1 533 aa20.19■□□□□ 0.82
PTCD1-204ENST00000430982 GNAT3A8MTJ3 354 aa20.18■□□□□ 0.82
PTCD1-204ENST00000430982 PIM2Q9P1W9 311 aa20.18■□□□□ 0.82
PTCD1-204ENST00000430982 ADAMTS7Q9UKP4 1686 aa20.18■□□□□ 0.82
PTCD1-204ENST00000430982 RBM42Q9BTD8 480 aaKnown RBP20.17■□□□□ 0.82
PTCD1-204ENST00000430982 SLC52A2Q9HAB3 445 aa20.17■□□□□ 0.82
PTCD1-204ENST00000430982 RFC4P35249 363 aa20.16■□□□□ 0.82
PTCD1-204ENST00000430982 TNS4Q8IZW8 715 aa20.16■□□□□ 0.82
PTCD1-204ENST00000430982 PNNQ9H307 717 aaKnown RBP20.15■□□□□ 0.82
PTCD1-204ENST00000430982 RNF181Q9P0P0 153 aa20.15■□□□□ 0.82
PTCD1-204ENST00000430982 ZC3H4Q9UPT8 1303 aaKnown RBP20.15■□□□□ 0.82
PTCD1-204ENST00000430982 DDR1Q08345 913 aa20.14■□□□□ 0.81
PTCD1-204ENST00000430982 WDR43Q15061 677 aaKnown RBP eCLIP20.14■□□□□ 0.81
PTCD1-204ENST00000430982 DALRD3Q5D0E6 543 aaKnown RBP20.14■□□□□ 0.81
PTCD1-204ENST00000430982 SMC1BQ8NDV3 1235 aa20.14■□□□□ 0.81
PTCD1-204ENST00000430982 IL17REQ8NFR9 667 aa20.14■□□□□ 0.81
PTCD1-204ENST00000430982 RRAGCQ9HB90 399 aa20.14■□□□□ 0.81
PTCD1-204ENST00000430982 TJP1Q07157 1748 aa20.13■□□□□ 0.81
PTCD1-204ENST00000430982 USP42Q9H9J4 1324 aaKnown RBP20.13■□□□□ 0.81
PTCD1-204ENST00000430982 MAPK8IP3Q9UPT6 1336 aa20.13■□□□□ 0.81
PTCD1-204ENST00000430982 ANP32CO43423 234 aa20.13■□□□□ 0.81
PTCD1-204ENST00000430982 PTCD1O75127 700 aaKnown RBP20.13■□□□□ 0.81
PTCD1-204ENST00000430982 TEFQ10587 303 aa20.13■□□□□ 0.81
PTCD1-204ENST00000430982 RTF1Q92541 710 aaKnown RBP20.13■□□□□ 0.81
PTCD1-204ENST00000430982 PLEKHF1Q96S99 279 aa20.13■□□□□ 0.81
PTCD1-204ENST00000430982 SCN11AQ9UI33 1791 aa20.13■□□□□ 0.81
PTCD1-204ENST00000430982 MRC1P22897 1456 aa20.11■□□□□ 0.81
PTCD1-204ENST00000430982 CAPN15O75808 1086 aa20.11■□□□□ 0.81
PTCD1-204ENST00000430982 SLC39A6Q13433 755 aa20.11■□□□□ 0.81
PTCD1-204ENST00000430982 NRXN2Q9P2S2 1712 aa20.1■□□□□ 0.81
PTCD1-204ENST00000430982 FKBP8Q14318 412 aa20.1■□□□□ 0.81
PTCD1-204ENST00000430982 MCM10Q7L590 875 aa20.1■□□□□ 0.81
PTCD1-204ENST00000430982 DLEC1Q9Y238 1755 aa20.1■□□□□ 0.81
PTCD1-204ENST00000430982 POLRMTO00411 1230 aaKnown RBP20.09■□□□□ 0.81
PTCD1-204ENST00000430982 NFE2L2Q16236 605 aa20.09■□□□□ 0.81
PTCD1-204ENST00000430982 SRP68Q9UHB9 627 aaKnown RBP20.09■□□□□ 0.81
PTCD1-204ENST00000430982 CHRNA5P30532 468 aa20.08■□□□□ 0.81
PTCD1-204ENST00000430982 CRKLP46109 303 aaKnown RBP20.08■□□□□ 0.81
PTCD1-204ENST00000430982 DCTN1Q14203 1278 aa20.08■□□□□ 0.81
PTCD1-204ENST00000430982 CCDC146Q8IYE0 955 aa20.08■□□□□ 0.81
PTCD1-204ENST00000430982 TIAM2Q8IVF5 1701 aa20.07■□□□□ 0.8
PTCD1-204ENST00000430982 HTATSF1O43719 755 aaKnown RBP20.07■□□□□ 0.8
PTCD1-204ENST00000430982 HSPA1AP0DMV8 641 aaKnown RBP20.07■□□□□ 0.8
PTCD1-204ENST00000430982 HSPA1BP0DMV9 641 aaKnown RBP20.07■□□□□ 0.8
PTCD1-204ENST00000430982 TM4SF1P30408 202 aa20.07■□□□□ 0.8
PTCD1-204ENST00000430982 TTC5Q8N0Z6 440 aa20.07■□□□□ 0.8
PTCD1-204ENST00000430982 CEMIPQ8WUJ3 1361 aa20.07■□□□□ 0.8
PTCD1-204ENST00000430982 ADAMTS8Q9UP79 889 aa20.06■□□□□ 0.8
PTCD1-204ENST00000430982 AFDNP55196 1824 aaKnown RBP20.06■□□□□ 0.8
PTCD1-204ENST00000430982 GLTPD2A6NH11 291 aa20.05■□□□□ 0.8
PTCD1-204ENST00000430982 RASSF7Q02833 373 aa20.05■□□□□ 0.8
PTCD1-204ENST00000430982 BTBD11A6QL63 1104 aa20.04■□□□□ 0.8
PTCD1-204ENST00000430982 VEGFAP15692 232 aaPredicted RBP20.04■□□□□ 0.8
PTCD1-204ENST00000430982 CCDC184Q52MB2 194 aa20.04■□□□□ 0.8
PTCD1-204ENST00000430982 INTS5Q6P9B9 1019 aaKnown RBP20.03■□□□□ 0.8
PTCD1-204ENST00000430982 RUNDC1Q96C34 613 aa20.03■□□□□ 0.8
PTCD1-204ENST00000430982 VIRMAQ69YN4 1812 aaKnown RBP20.02■□□□□ 0.8
PTCD1-204ENST00000430982 LMNB1P20700 586 aa20.02■□□□□ 0.8
PTCD1-204ENST00000430982 RIPK4P57078 832 aa20.02■□□□□ 0.8
PTCD1-204ENST00000430982 ZNF790Q6PG37 636 aa20.02■□□□□ 0.8
PTCD1-204ENST00000430982 DNAJC10Q8IXB1 793 aa20.02■□□□□ 0.8
PTCD1-204ENST00000430982 RRP7AQ9Y3A4 280 aaKnown RBP20.02■□□□□ 0.8
PTCD1-204ENST00000430982 TMPOP42166 694 aaKnown RBP20.01■□□□□ 0.79
PTCD1-204ENST00000430982 THUMPD2Q9BTF0 503 aaKnown RBP20.01■□□□□ 0.79
PTCD1-204ENST00000430982 MRS2Q9HD23 443 aa20.01■□□□□ 0.79
PTCD1-204ENST00000430982 POTECB2RU33 542 aa20■□□□□ 0.79
PTCD1-204ENST00000430982 KCNQ3O43525 872 aa20■□□□□ 0.79
PTCD1-204ENST00000430982 NEUROD2Q15784 382 aa20■□□□□ 0.79
PTCD1-204ENST00000430982 ZNF496Q96IT1 587 aaPredicted RBP20■□□□□ 0.79
PTCD1-204ENST00000430982 SOS1Q07889 1333 aaPredicted RBP20■□□□□ 0.79
PTCD1-204ENST00000430982 TAF7Q15545 349 aaPredicted RBP19.99■□□□□ 0.79
PTCD1-204ENST00000430982 CCDC88AQ3V6T2 1871 aa19.99■□□□□ 0.79
PTCD1-204ENST00000430982 NFKBIEO00221 500 aa19.98■□□□□ 0.79
PTCD1-204ENST00000430982 LMOD3Q0VAK6 560 aa19.98■□□□□ 0.79
PTCD1-204ENST00000430982 USPL1Q5W0Q7 1092 aa19.98■□□□□ 0.79
PTCD1-204ENST00000430982 VSIG10Q8N0Z9 540 aa19.98■□□□□ 0.79
PTCD1-204ENST00000430982 FMNL2Q96PY5 1086 aa19.98■□□□□ 0.79
PTCD1-204ENST00000430982 NFIXQ14938 502 aa19.97■□□□□ 0.79
PTCD1-204ENST00000430982 MIS18AQ9NYP9 233 aa19.97■□□□□ 0.79
PTCD1-204ENST00000430982 HEG1Q9ULI3 1381 aa19.96■□□□□ 0.79
PTCD1-204ENST00000430982 SIPA1L3O60292 1781 aaPredicted RBP19.96■□□□□ 0.79
PTCD1-204ENST00000430982 CYP19A1P11511 503 aaPredicted RBP19.96■□□□□ 0.79
PTCD1-204ENST00000430982 DICER1Q9UPY3 1922 aaKnown RBP19.96■□□□□ 0.79
PTCD1-204ENST00000430982 ZPR1O75312 459 aa19.95■□□□□ 0.78
PTCD1-204ENST00000430982 PNISRQ8TF01 805 aaKnown RBP19.95■□□□□ 0.78
PTCD1-204ENST00000430982 BCL2L12Q9HB09 334 aa19.95■□□□□ 0.78
PTCD1-204ENST00000430982 NARFQ9UHQ1 456 aa19.95■□□□□ 0.78
PTCD1-204ENST00000430982 DLG5Q8TDM6 1919 aa19.94■□□□□ 0.78
PTCD1-204ENST00000430982 STARD3NLO95772 234 aa19.94■□□□□ 0.78
PTCD1-204ENST00000430982 TTLL6Q8N841 843 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 1930.6 ms