RNA–Protein interactions for RNA: ENST00000430841.6

ECHDC1-207, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-207ENST00000430841 PCDH11YQ9BZA8 1340 aa11.01□□□□□ -0.65
ECHDC1-207ENST00000430841 A0A1W2PP64 1363 aa11.01□□□□□ -0.65
ECHDC1-207ENST00000430841 RTL1A6NKG5 1358 aa11.01□□□□□ -0.65
ECHDC1-207ENST00000430841 PHF14O94880 888 aa11□□□□□ -0.65
ECHDC1-207ENST00000430841 C16orf71Q8IYS4 520 aaPredicted RBP11□□□□□ -0.65
ECHDC1-207ENST00000430841 SMARCC1Q92922 1105 aaPredicted RBP11□□□□□ -0.65
ECHDC1-207ENST00000430841 RNF25Q96BH1 459 aaPredicted RBP11□□□□□ -0.65
ECHDC1-207ENST00000430841 TAOK2Q9UL54 1235 aa11□□□□□ -0.65
ECHDC1-207ENST00000430841 WWC3Q9ULE0 1092 aa11□□□□□ -0.65
ECHDC1-207ENST00000430841 IGSF1Q8N6C5 1336 aa11□□□□□ -0.65
ECHDC1-207ENST00000430841 PALLDQ8WX93 1383 aa11□□□□□ -0.65
ECHDC1-207ENST00000430841 HOXC9P31274 260 aa10.99□□□□□ -0.65
ECHDC1-207ENST00000430841 APLP1P51693 650 aa10.99□□□□□ -0.65
ECHDC1-207ENST00000430841 SLC12A5Q9H2X9 1139 aa10.99□□□□□ -0.65
ECHDC1-207ENST00000430841 MEGF6O75095 1541 aa10.99□□□□□ -0.65
ECHDC1-207ENST00000430841 MPRIPQ6WCQ1 1025 aa10.98□□□□□ -0.65
ECHDC1-207ENST00000430841 MAP3K19Q56UN5 1328 aa10.98□□□□□ -0.65
ECHDC1-207ENST00000430841 NSD2O96028 1365 aa10.98□□□□□ -0.65
ECHDC1-207ENST00000430841 ADCY9O60503 1353 aa10.97□□□□□ -0.65
ECHDC1-207ENST00000430841 CD163L1Q9NR16 1453 aa10.97□□□□□ -0.65
ECHDC1-207ENST00000430841 C4BP0C0L5 1744 aa10.97□□□□□ -0.65
ECHDC1-207ENST00000430841 RGPD2P0DJD1 1756 aa10.97□□□□□ -0.65
ECHDC1-207ENST00000430841 TONSLQ96HA7 1378 aa10.96□□□□□ -0.65
ECHDC1-207ENST00000430841 USHBP1Q8N6Y0 703 aa10.96□□□□□ -0.65
ECHDC1-207ENST00000430841 TAF1LQ8IZX4 1826 aa10.95□□□□□ -0.66
ECHDC1-207ENST00000430841 KIF3CO14782 793 aa10.95□□□□□ -0.66
ECHDC1-207ENST00000430841 SIN3AQ96ST3 1273 aa10.95□□□□□ -0.66
ECHDC1-207ENST00000430841 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.94□□□□□ -0.66
ECHDC1-207ENST00000430841 NUDT7P0C024 238 aa10.94□□□□□ -0.66
ECHDC1-207ENST00000430841 SSFA2P28290 1259 aa10.94□□□□□ -0.66
ECHDC1-207ENST00000430841 GNPATO15228 680 aa10.93□□□□□ -0.66
ECHDC1-207ENST00000430841 RRS1Q15050 365 aaKnown RBP10.93□□□□□ -0.66
ECHDC1-207ENST00000430841 PUS7Q96PZ0 661 aaKnown RBP10.93□□□□□ -0.66
ECHDC1-207ENST00000430841 TMOD3Q9NYL9 352 aa10.93□□□□□ -0.66
ECHDC1-207ENST00000430841 LHX6Q9UPM6 363 aa10.93□□□□□ -0.66
ECHDC1-207ENST00000430841 SPG7Q9UQ90 795 aa10.93□□□□□ -0.66
ECHDC1-207ENST00000430841 BCS1LQ9Y276 419 aa10.93□□□□□ -0.66
ECHDC1-207ENST00000430841 FLT4P35916 1363 aa10.92□□□□□ -0.66
ECHDC1-207ENST00000430841 TOMM70O94826 608 aa10.92□□□□□ -0.66
ECHDC1-207ENST00000430841 NBPF6Q5VWK0 638 aa10.92□□□□□ -0.66
ECHDC1-207ENST00000430841 PAXIP1Q6ZW49 1069 aaPredicted RBP10.92□□□□□ -0.66
ECHDC1-207ENST00000430841 NBPF4Q96M43 638 aa10.92□□□□□ -0.66
ECHDC1-207ENST00000430841 UBR3Q6ZT12 1888 aa10.91□□□□□ -0.66
ECHDC1-207ENST00000430841 PLEKHG2Q9H7P9 1386 aa10.91□□□□□ -0.66
ECHDC1-207ENST00000430841 KIF20BQ96Q89 1820 aa10.91□□□□□ -0.66
ECHDC1-207ENST00000430841 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.91□□□□□ -0.66
ECHDC1-207ENST00000430841 ARHGAP27Q6ZUM4 889 aa10.91□□□□□ -0.66
ECHDC1-207ENST00000430841 FBXO22Q8NEZ5 403 aa10.91□□□□□ -0.66
ECHDC1-207ENST00000430841 ZFP91Q96JP5 570 aaPredicted RBP10.91□□□□□ -0.66
ECHDC1-207ENST00000430841 CCDC87Q9NVE4 849 aa10.91□□□□□ -0.66
ECHDC1-207ENST00000430841 ITGB4P16144 1822 aa10.91□□□□□ -0.66
ECHDC1-207ENST00000430841 PPM1GO15355 546 aaPredicted RBP10.9□□□□□ -0.66
ECHDC1-207ENST00000430841 MMP10P09238 476 aa10.9□□□□□ -0.66
ECHDC1-207ENST00000430841 GGNBP2Q9H3C7 697 aa10.9□□□□□ -0.66
ECHDC1-207ENST00000430841 INSRP06213 1382 aa10.9□□□□□ -0.67
ECHDC1-207ENST00000430841 KDM2BQ8NHM5 1336 aa10.89□□□□□ -0.67
ECHDC1-207ENST00000430841 CICQ96RK0 1608 aaPredicted RBP10.89□□□□□ -0.67
ECHDC1-207ENST00000430841 LOC102724428A0A0B4J2F2 783 aa10.89□□□□□ -0.67
ECHDC1-207ENST00000430841 FCHSD2O94868 740 aa10.89□□□□□ -0.67
ECHDC1-207ENST00000430841 ATP6V1AP38606 617 aa10.89□□□□□ -0.67
ECHDC1-207ENST00000430841 SIK1P57059 783 aa10.89□□□□□ -0.67
ECHDC1-207ENST00000430841 SPRYD3Q8NCJ5 442 aa10.89□□□□□ -0.67
ECHDC1-207ENST00000430841 RTCBQ9Y3I0 505 aaKnown RBP10.89□□□□□ -0.67
ECHDC1-207ENST00000430841 PARP3Q9Y6F1 533 aa10.89□□□□□ -0.67
ECHDC1-207ENST00000430841 WDR90Q96KV7 1748 aa10.89□□□□□ -0.67
ECHDC1-207ENST00000430841 KIF24Q5T7B8 1368 aa10.89□□□□□ -0.67
ECHDC1-207ENST00000430841 FBLN1P23142 703 aa10.88□□□□□ -0.67
ECHDC1-207ENST00000430841 TGFB2P61812 414 aa10.88□□□□□ -0.67
ECHDC1-207ENST00000430841 TMF1P82094 1093 aa10.88□□□□□ -0.67
ECHDC1-207ENST00000430841 CDCA8Q53HL2 280 aa10.88□□□□□ -0.67
ECHDC1-207ENST00000430841 CFAP44Q96MT7 982 aa10.88□□□□□ -0.67
ECHDC1-207ENST00000430841 HCSTQ9UBK5 93 aa10.88□□□□□ -0.67
ECHDC1-207ENST00000430841 PKD1L3Q7Z443 1732 aa10.87□□□□□ -0.67
ECHDC1-207ENST00000430841 TOGARAM1Q9Y4F4 1720 aa10.87□□□□□ -0.67
ECHDC1-207ENST00000430841 PBX2P40425 430 aa10.87□□□□□ -0.67
ECHDC1-207ENST00000430841 TRAPPC3LQ5T215 181 aa10.87□□□□□ -0.67
ECHDC1-207ENST00000430841 TNS4Q8IZW8 715 aa10.87□□□□□ -0.67
ECHDC1-207ENST00000430841 NLGN1Q8N2Q7 840 aa10.87□□□□□ -0.67
ECHDC1-207ENST00000430841 PXDNLA1KZ92 1463 aa10.87□□□□□ -0.67
ECHDC1-207ENST00000430841 N4BP2Q86UW6 1770 aaPredicted RBP10.86□□□□□ -0.67
ECHDC1-207ENST00000430841 C2orf72A6NCS6 295 aa10.86□□□□□ -0.67
ECHDC1-207ENST00000430841 CYP27B1O15528 508 aa10.86□□□□□ -0.67
ECHDC1-207ENST00000430841 RFC4P35249 363 aa10.86□□□□□ -0.67
ECHDC1-207ENST00000430841 HSP90AB2PQ58FF8 381 aa10.86□□□□□ -0.67
ECHDC1-207ENST00000430841 LINC00116Q8NCU8 138 aa10.86□□□□□ -0.67
ECHDC1-207ENST00000430841 RBM46Q8TBY0 533 aaKnown RBP10.86□□□□□ -0.67
ECHDC1-207ENST00000430841 PIGBQ92521 554 aa10.86□□□□□ -0.67
ECHDC1-207ENST00000430841 ST20-MTHFSA0A0A6YYL1 179 aa10.85□□□□□ -0.67
ECHDC1-207ENST00000430841 A0A0G2JLW4 131 aa10.85□□□□□ -0.67
ECHDC1-207ENST00000430841 FSTL1Q12841 308 aa10.85□□□□□ -0.67
ECHDC1-207ENST00000430841 ADGRD1Q6QNK2 874 aa10.85□□□□□ -0.67
ECHDC1-207ENST00000430841 IFNL2Q8IZJ0 200 aa10.85□□□□□ -0.67
ECHDC1-207ENST00000430841 NMRK2Q9NPI5 230 aa10.85□□□□□ -0.67
ECHDC1-207ENST00000430841 C10orf71Q711Q0 1435 aa10.84□□□□□ -0.67
ECHDC1-207ENST00000430841 HRO43593 1189 aa10.84□□□□□ -0.67
ECHDC1-207ENST00000430841 C9orf131Q5VYM1 1079 aa10.84□□□□□ -0.67
ECHDC1-207ENST00000430841 SMIM5Q71RC9 77 aa10.84□□□□□ -0.67
ECHDC1-207ENST00000430841 KLRG1Q96E93 195 aa10.84□□□□□ -0.67
ECHDC1-207ENST00000430841 RNF181Q9P0P0 153 aa10.84□□□□□ -0.67
ECHDC1-207ENST00000430841 PCDHGA4Q9Y5G9 962 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms