RNA–Protein interactions for RNA: ENST00000430710.7

CHD8-202, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD8, Length 7,420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-202ENST00000430710 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.18□□□□□ -1.262e-6■■■■■ 149.1
CHD8-202ENST00000430710 TOP2BQ02880 1626 aa7.18□□□□□ -1.26
CHD8-202ENST00000430710 USO1O60763 962 aaKnown RBP7.18□□□□□ -1.26
CHD8-202ENST00000430710 GLRX3O76003 335 aaKnown RBP7.18□□□□□ -1.26
CHD8-202ENST00000430710 SLU7O95391 586 aaKnown RBP7.18□□□□□ -1.26
CHD8-202ENST00000430710 CCDC158Q5M9N0 1113 aa7.18□□□□□ -1.26
CHD8-202ENST00000430710 DUSP27Q5VZP5 1158 aa7.18□□□□□ -1.26
CHD8-202ENST00000430710 TBC1D9Q6ZT07 1266 aa7.18□□□□□ -1.26
CHD8-202ENST00000430710 TMC6Q7Z403 805 aa7.18□□□□□ -1.26
CHD8-202ENST00000430710 ANKRD30BQ9BXX2 1392 aa7.18□□□□□ -1.26
CHD8-202ENST00000430710 HCLS1P14317 486 aaPredicted RBP7.18□□□□□ -1.26
CHD8-202ENST00000430710 ZNF408Q9H9D4 720 aa7.18□□□□□ -1.26
CHD8-202ENST00000430710 ANKRD62A6NC57 917 aa7.18□□□□□ -1.26
CHD8-202ENST00000430710 MAP4K4O95819 1239 aaPredicted RBP7.18□□□□□ -1.26
CHD8-202ENST00000430710 MX1P20591 662 aa7.18□□□□□ -1.26
CHD8-202ENST00000430710 SPECC1LQ69YQ0 1117 aa7.18□□□□□ -1.26
CHD8-202ENST00000430710 ZSCAN25Q6NSZ9 544 aa7.18□□□□□ -1.26
CHD8-202ENST00000430710 KIF1BPQ96EK5 621 aa7.18□□□□□ -1.26
CHD8-202ENST00000430710 TMPOP42166 694 aaKnown RBP7.18□□□□□ -1.26
CHD8-202ENST00000430710 SKAP1Q86WV1 359 aa7.18□□□□□ -1.26
CHD8-202ENST00000430710 CKAP2LQ8IYA6 745 aa7.18□□□□□ -1.26
CHD8-202ENST00000430710 FYB1O15117 783 aa7.17□□□□□ -1.26
CHD8-202ENST00000430710 IFFO1Q0D2I5 559 aa7.17□□□□□ -1.26
CHD8-202ENST00000430710 RASSF4Q9H2L5 321 aa7.17□□□□□ -1.26
CHD8-202ENST00000430710 KRT18P05783 430 aaKnown RBP7.17□□□□□ -1.26
CHD8-202ENST00000430710 HMGB1P09429 215 aaKnown RBP7.17□□□□□ -1.26
CHD8-202ENST00000430710 CA8P35219 290 aa7.17□□□□□ -1.26
CHD8-202ENST00000430710 NLRP6P59044 892 aa7.17□□□□□ -1.26
CHD8-202ENST00000430710 SMC1AQ14683 1233 aaKnown RBP7.17□□□□□ -1.26
CHD8-202ENST00000430710 THEMISQ8N1K5 641 aaPredicted RBP7.17□□□□□ -1.26
CHD8-202ENST00000430710 NAIPQ13075 1403 aa7.17□□□□□ -1.26
CHD8-202ENST00000430710 NCKAP5LQ9HCH0 1330 aa7.17□□□□□ -1.26
CHD8-202ENST00000430710 KDM4AO75164 1064 aa7.17□□□□□ -1.26
CHD8-202ENST00000430710 HSPA4P34932 840 aa7.17□□□□□ -1.26
CHD8-202ENST00000430710 CCDC57Q2TAC2 916 aa7.17□□□□□ -1.26
CHD8-202ENST00000430710 HDGFL1Q5TGJ6 251 aa7.17□□□□□ -1.26
CHD8-202ENST00000430710 FERMT3Q86UX7 667 aa7.17□□□□□ -1.26
CHD8-202ENST00000430710 BIN2Q9UBW5 565 aaPredicted RBP7.17□□□□□ -1.26
CHD8-202ENST00000430710 FCHSD2O94868 740 aa7.17□□□□□ -1.26
CHD8-202ENST00000430710 TTC39AQ5SRH9 613 aa7.17□□□□□ -1.26
CHD8-202ENST00000430710 ABTB2Q8N961 1025 aa7.17□□□□□ -1.26
CHD8-202ENST00000430710 POGZQ7Z3K3 1410 aa7.17□□□□□ -1.26
CHD8-202ENST00000430710 C9orf84Q5VXU9 1444 aa7.17□□□□□ -1.26
CHD8-202ENST00000430710 ARHGAP5Q13017 1502 aa7.17□□□□□ -1.26
CHD8-202ENST00000430710 CKAP4Q07065 602 aaKnown RBP7.17□□□□□ -1.26
CHD8-202ENST00000430710 RAB3GAP1Q15042 981 aa7.17□□□□□ -1.26
CHD8-202ENST00000430710 AACSQ86V21 672 aa7.17□□□□□ -1.26
CHD8-202ENST00000430710 EHBP1Q8NDI1 1231 aa7.17□□□□□ -1.26
CHD8-202ENST00000430710 NACAP1Q9BZK3 213 aa7.17□□□□□ -1.26
CHD8-202ENST00000430710 U3KPZ7 1027 aaPredicted RBP7.17□□□□□ -1.26
CHD8-202ENST00000430710 SRGAP3O43295 1099 aa7.16□□□□□ -1.26
CHD8-202ENST00000430710 GABPB1Q06547 395 aaPredicted RBP7.16□□□□□ -1.26
CHD8-202ENST00000430710 YEATS4O95619 227 aa7.16□□□□□ -1.26
CHD8-202ENST00000430710 POLD1P28340 1107 aa7.16□□□□□ -1.26
CHD8-202ENST00000430710 FAM200AQ8TCP9 573 aa7.16□□□□□ -1.26
CHD8-202ENST00000430710 HSF2BPO75031 334 aa7.16□□□□□ -1.26
CHD8-202ENST00000430710 TUBBP07437 444 aa7.16□□□□□ -1.26
CHD8-202ENST00000430710 GNG11P61952 73 aa7.16□□□□□ -1.26
CHD8-202ENST00000430710 PLEKHO1Q53GL0 409 aaPredicted RBP7.16□□□□□ -1.26
CHD8-202ENST00000430710 FKBP15Q5T1M5 1219 aa7.16□□□□□ -1.26
CHD8-202ENST00000430710 PPM1FP49593 454 aaPredicted RBP7.16□□□□□ -1.26
CHD8-202ENST00000430710 C8orf34Q49A92 452 aa7.16□□□□□ -1.26
CHD8-202ENST00000430710 SSH1Q8WYL5 1049 aa7.16□□□□□ -1.26
CHD8-202ENST00000430710 RRAGDQ9NQL2 400 aaPredicted RBP7.16□□□□□ -1.26
CHD8-202ENST00000430710 FGFR1OPO95684 399 aaKnown RBP7.16□□□□□ -1.26
CHD8-202ENST00000430710 CAPN2P17655 700 aa7.16□□□□□ -1.26
CHD8-202ENST00000430710 FSIP1Q8NA03 581 aa7.16□□□□□ -1.26
CHD8-202ENST00000430710 BMP2KQ9NSY1 1161 aaPredicted RBP7.16□□□□□ -1.26
CHD8-202ENST00000430710 DAPK1P53355 1430 aa7.16□□□□□ -1.26
CHD8-202ENST00000430710 PRIM1P49642 420 aaKnown RBP7.16□□□□□ -1.26
CHD8-202ENST00000430710 MTMR7Q9Y216 660 aa7.16□□□□□ -1.26
CHD8-202ENST00000430710 SKILP12757 684 aa7.15□□□□□ -1.26
CHD8-202ENST00000430710 HDAC1Q13547 482 aaPredicted RBP7.15□□□□□ -1.26
CHD8-202ENST00000430710 NFE2L2Q16236 605 aa7.15□□□□□ -1.26
CHD8-202ENST00000430710 CCDC12Q8WUD4 166 aaPredicted RBP7.15□□□□□ -1.26
CHD8-202ENST00000430710 ALS2CR12Q96Q35 445 aa7.15□□□□□ -1.26
CHD8-202ENST00000430710 GDPD2Q9HCC8 539 aa7.15□□□□□ -1.26
CHD8-202ENST00000430710 RSPH14Q9UHP6 348 aa7.15□□□□□ -1.26
CHD8-202ENST00000430710 ZC3H6P61129 1189 aaKnown RBP7.15□□□□□ -1.26
CHD8-202ENST00000430710 CEP112Q8N8E3 955 aa7.15□□□□□ -1.26
CHD8-202ENST00000430710 C8orf76Q96K31 380 aa7.15□□□□□ -1.26
CHD8-202ENST00000430710 NUP88Q99567 741 aaPredicted RBP7.15□□□□□ -1.26
CHD8-202ENST00000430710 ZSCAN16Q9H4T2 348 aaPredicted RBP7.15□□□□□ -1.26
CHD8-202ENST00000430710 BCCIPQ9P287 314 aaKnown RBP eCLIP7.15□□□□□ -1.26
CHD8-202ENST00000430710 EBAG9O00559 213 aa7.15□□□□□ -1.26
CHD8-202ENST00000430710 SMC5Q8IY18 1101 aa7.15□□□□□ -1.26
CHD8-202ENST00000430710 GOLGA1Q92805 767 aa7.15□□□□□ -1.26
CHD8-202ENST00000430710 ZNF830Q96NB3 372 aaPredicted RBP7.15□□□□□ -1.26
CHD8-202ENST00000430710 ATAD2Q6PL18 1390 aa7.15□□□□□ -1.26
CHD8-202ENST00000430710 A0A1B0GUL7 405 aa7.15□□□□□ -1.27
CHD8-202ENST00000430710 KCNA4P22459 653 aa7.15□□□□□ -1.27
CHD8-202ENST00000430710 CCDC113Q9H0I3 377 aa7.15□□□□□ -1.27
CHD8-202ENST00000430710 PRDM11Q9NQV5 511 aa7.15□□□□□ -1.27
CHD8-202ENST00000430710 ZSCAN22P10073 491 aaPredicted RBP7.15□□□□□ -1.27
CHD8-202ENST00000430710 SPECC1Q5M775 1068 aa7.15□□□□□ -1.27
CHD8-202ENST00000430710 GIMAP6Q6P9H5 292 aa7.15□□□□□ -1.27
CHD8-202ENST00000430710 TAOK3Q9H2K8 898 aa7.15□□□□□ -1.27
CHD8-202ENST00000430710 PHAXQ9H814 394 aaKnown RBP7.15□□□□□ -1.27
CHD8-202ENST00000430710 OPA1O60313 960 aa7.15□□□□□ -1.27
CHD8-202ENST00000430710 GJB2P29033 226 aa7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms