RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 CHL1O00533 1208 aa14.97□□□□□ -0.01
CPNE4-201ENST00000429747 SIRT2Q8IXJ6 389 aa14.97□□□□□ -0.01
CPNE4-201ENST00000429747 NAT10Q9H0A0 1025 aaKnown RBP14.97□□□□□ -0.01
CPNE4-201ENST00000429747 TMEM63CQ9P1W3 806 aa14.97□□□□□ -0.01
CPNE4-201ENST00000429747 MYO5CQ9NQX4 1742 aa14.97□□□□□ -0.01
CPNE4-201ENST00000429747 CPA1P15085 419 aa14.97□□□□□ -0.01
CPNE4-201ENST00000429747 CBX1P83916 185 aa14.97□□□□□ -0.01
CPNE4-201ENST00000429747 CCDC34Q96HJ3 373 aa14.97□□□□□ -0.01
CPNE4-201ENST00000429747 TRIM29Q14134 588 aa14.96□□□□□ -0.01
CPNE4-201ENST00000429747 STK38Q15208 465 aa14.96□□□□□ -0.01
CPNE4-201ENST00000429747 PDCL2Q8N4E4 241 aa14.96□□□□□ -0.01
CPNE4-201ENST00000429747 DNM1Q05193 864 aaKnown RBP14.96□□□□□ -0.01
CPNE4-201ENST00000429747 HS1BP3Q53T59 392 aa14.96□□□□□ -0.01
CPNE4-201ENST00000429747 POLR1AO95602 1720 aaPredicted RBP14.96□□□□□ -0.02
CPNE4-201ENST00000429747 CEBPAP49715 358 aaPredicted RBP14.95□□□□□ -0.02
CPNE4-201ENST00000429747 CROCC2H7BZ55 1655 aa14.95□□□□□ -0.02
CPNE4-201ENST00000429747 DYNC1I1O14576 645 aa14.95□□□□□ -0.02
CPNE4-201ENST00000429747 PIK3R4Q99570 1358 aa14.95□□□□□ -0.02
CPNE4-201ENST00000429747 PNMA6EA0A0J9YXQ4 647 aa14.95□□□□□ -0.02
CPNE4-201ENST00000429747 PPFIA3O75145 1194 aa14.95□□□□□ -0.02
CPNE4-201ENST00000429747 AK2P54819 239 aa14.95□□□□□ -0.02
CPNE4-201ENST00000429747 NFXL1Q6ZNB6 911 aa14.95□□□□□ -0.02
CPNE4-201ENST00000429747 SCAND2PQ9GZW5 306 aaPredicted RBP14.95□□□□□ -0.02
CPNE4-201ENST00000429747 CHPF2Q9P2E5 772 aa14.95□□□□□ -0.02
CPNE4-201ENST00000429747 NOL7Q9UMY1 257 aaKnown RBP14.95□□□□□ -0.02
CPNE4-201ENST00000429747 NOLC1Q14978 699 aaKnown RBP eCLIP14.95□□□□□ -0.02
CPNE4-201ENST00000429747 INTS4Q96HW7 963 aaKnown RBP14.94□□□□□ -0.02
CPNE4-201ENST00000429747 ZNF396Q96N95 335 aaPredicted RBP14.94□□□□□ -0.02
CPNE4-201ENST00000429747 EYA1Q99502 592 aa14.94□□□□□ -0.02
CPNE4-201ENST00000429747 IQGAP3Q86VI3 1631 aa14.94□□□□□ -0.02
CPNE4-201ENST00000429747 MYOM2P54296 1465 aa14.94□□□□□ -0.02
CPNE4-201ENST00000429747 UVSSAQ2YD98 709 aa14.94□□□□□ -0.02
CPNE4-201ENST00000429747 THEMISQ8N1K5 641 aaPredicted RBP14.94□□□□□ -0.02
CPNE4-201ENST00000429747 C16orf45Q96MC5 204 aaPredicted RBP14.94□□□□□ -0.02
CPNE4-201ENST00000429747 CFAP45Q9UL16 551 aa14.94□□□□□ -0.02
CPNE4-201ENST00000429747 MAP3K2Q9Y2U5 619 aa14.94□□□□□ -0.02
CPNE4-201ENST00000429747 PHAXQ9H814 394 aaKnown RBP14.94□□□□□ -0.02
CPNE4-201ENST00000429747 DBF4Q9UBU7 674 aaPredicted RBP14.94□□□□□ -0.02
CPNE4-201ENST00000429747 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.93□□□□□ -0.02
CPNE4-201ENST00000429747 MAP3K19Q56UN5 1328 aa14.93□□□□□ -0.02
CPNE4-201ENST00000429747 F13A1P00488 732 aa14.93□□□□□ -0.02
CPNE4-201ENST00000429747 KRT32Q14532 448 aa14.93□□□□□ -0.02
CPNE4-201ENST00000429747 MNS1Q8NEH6 495 aa14.93□□□□□ -0.02
CPNE4-201ENST00000429747 GUCY1B3Q02153 619 aa14.93□□□□□ -0.02
CPNE4-201ENST00000429747 EVI5LQ96CN4 794 aa14.93□□□□□ -0.02
CPNE4-201ENST00000429747 PA2G4Q9UQ80 394 aaKnown RBP14.93□□□□□ -0.02
CPNE4-201ENST00000429747 PES1O00541 588 aaKnown RBP14.92□□□□□ -0.02
CPNE4-201ENST00000429747 GADD45BO75293 160 aaPredicted RBP14.92□□□□□ -0.02
CPNE4-201ENST00000429747 SYT1P21579 422 aa14.92□□□□□ -0.02
CPNE4-201ENST00000429747 RASSF8Q8NHQ8 419 aa14.92□□□□□ -0.02
CPNE4-201ENST00000429747 ATP2B1P20020 1258 aa14.92□□□□□ -0.02
CPNE4-201ENST00000429747 PALD1Q9ULE6 856 aa14.92□□□□□ -0.02
CPNE4-201ENST00000429747 SOS1Q07889 1333 aaPredicted RBP14.91□□□□□ -0.02
CPNE4-201ENST00000429747 JARID2Q92833 1246 aaPredicted RBP14.91□□□□□ -0.02
CPNE4-201ENST00000429747 RTL1A6NKG5 1358 aa14.91□□□□□ -0.02
CPNE4-201ENST00000429747 ZC3H6P61129 1189 aaKnown RBP14.91□□□□□ -0.02
CPNE4-201ENST00000429747 PDILTQ8N807 584 aa14.91□□□□□ -0.02
CPNE4-201ENST00000429747 PPP1R9BQ96SB3 815 aa14.91□□□□□ -0.02
CPNE4-201ENST00000429747 RBM8AQ9Y5S9 174 aaKnown RBP14.91□□□□□ -0.02
CPNE4-201ENST00000429747 TULP1O00294 542 aaPredicted RBP14.91□□□□□ -0.02
CPNE4-201ENST00000429747 GPT2Q8TD30 523 aa14.91□□□□□ -0.02
CPNE4-201ENST00000429747 FAM177BA6PVY3 158 aa14.9□□□□□ -0.02
CPNE4-201ENST00000429747 ZNF165P49910 485 aa14.9□□□□□ -0.02
CPNE4-201ENST00000429747 FKBP4Q02790 459 aaKnown RBP eCLIP14.9□□□□□ -0.02
CPNE4-201ENST00000429747 MYD88Q99836 296 aa14.9□□□□□ -0.02
CPNE4-201ENST00000429747 AKAP17AQ02040 695 aaKnown RBP14.9□□□□□ -0.02
CPNE4-201ENST00000429747 CEP57L1Q8IYX8 460 aa14.9□□□□□ -0.02
CPNE4-201ENST00000429747 UNC13BO14795 1591 aa14.9□□□□□ -0.02
CPNE4-201ENST00000429747 PLXNC1O60486 1568 aa14.9□□□□□ -0.02
CPNE4-201ENST00000429747 CLIP2Q9UDT6 1046 aa14.9□□□□□ -0.02
CPNE4-201ENST00000429747 EDC4Q6P2E9 1401 aaKnown RBP14.89□□□□□ -0.03
CPNE4-201ENST00000429747 CLTCL1P53675 1640 aa14.89□□□□□ -0.03
CPNE4-201ENST00000429747 C17orf53Q8N3J3 647 aaPredicted RBP14.89□□□□□ -0.03
CPNE4-201ENST00000429747 PDIA4P13667 645 aaKnown RBP14.89□□□□□ -0.03
CPNE4-201ENST00000429747 STK11IPQ8N1F8 1099 aa14.89□□□□□ -0.03
CPNE4-201ENST00000429747 POGZQ7Z3K3 1410 aa14.89□□□□□ -0.03
CPNE4-201ENST00000429747 BRD1O95696 1058 aa14.89□□□□□ -0.03
CPNE4-201ENST00000429747 TNNT1P13805 278 aa14.89□□□□□ -0.03
CPNE4-201ENST00000429747 TATP17735 454 aaPredicted RBP14.89□□□□□ -0.03
CPNE4-201ENST00000429747 DACT1Q9NYF0 836 aa14.89□□□□□ -0.03
CPNE4-201ENST00000429747 SPDYE4A6NLX3 237 aa14.88□□□□□ -0.03
CPNE4-201ENST00000429747 CCT2P78371 535 aaKnown RBP14.88□□□□□ -0.03
CPNE4-201ENST00000429747 PPP4R3BQ5MIZ7 849 aa14.88□□□□□ -0.03
CPNE4-201ENST00000429747 LARP1Q6PKG0 1096 aaKnown RBP14.88□□□□□ -0.03
CPNE4-201ENST00000429747 PRIMPOLQ96LW4 560 aa14.88□□□□□ -0.03
CPNE4-201ENST00000429747 CCDC85AQ96PX6 553 aaPredicted RBP14.88□□□□□ -0.03
CPNE4-201ENST00000429747 LRRC2Q9BYS8 371 aa14.88□□□□□ -0.03
CPNE4-201ENST00000429747 DDX19AQ9NUU7 478 aaKnown RBP14.88□□□□□ -0.03
CPNE4-201ENST00000429747 ERBB4Q15303 1308 aa14.88□□□□□ -0.03
CPNE4-201ENST00000429747 BRPF1P55201 1214 aaPredicted RBP14.88□□□□□ -0.03
CPNE4-201ENST00000429747 TRMT1Q9NXH9 659 aaKnown RBP14.88□□□□□ -0.03
CPNE4-201ENST00000429747 TNNT3P45378 269 aaPredicted RBP14.88□□□□□ -0.03
CPNE4-201ENST00000429747 OLFM4Q6UX06 510 aa14.88□□□□□ -0.03
CPNE4-201ENST00000429747 CCDC186Q7Z3E2 898 aa14.88□□□□□ -0.03
CPNE4-201ENST00000429747 PHF8Q9UPP1 1060 aa14.88□□□□□ -0.03
CPNE4-201ENST00000429747 FAM173BQ6P4H8 233 aa14.87□□□□□ -0.03
CPNE4-201ENST00000429747 MADDQ8WXG6 1647 aa14.87□□□□□ -0.03
CPNE4-201ENST00000429747 DHX16O60231 1041 aaKnown RBP14.87□□□□□ -0.03
CPNE4-201ENST00000429747 FAM177A1Q8N128 213 aaPredicted RBP14.87□□□□□ -0.03
CPNE4-201ENST00000429747 ZHX1Q9UKY1 873 aaPredicted RBP14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms