RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 OTUD6BQ8N6M0 293 aa10.53□□□□□ -0.72
CDC42BPA-206ENST00000429440 ITFG2Q969R8 447 aa10.53□□□□□ -0.72
CDC42BPA-206ENST00000429440 EXOC4Q96A65 974 aa10.53□□□□□ -0.72
CDC42BPA-206ENST00000429440 ABCC3O15438 1527 aa10.52□□□□□ -0.72
CDC42BPA-206ENST00000429440 LIG1P18858 919 aa10.52□□□□□ -0.72
CDC42BPA-206ENST00000429440 OS9Q13438 667 aaPredicted RBP10.52□□□□□ -0.72
CDC42BPA-206ENST00000429440 MVPQ14764 893 aaKnown RBP10.52□□□□□ -0.72
CDC42BPA-206ENST00000429440 ELF2Q15723 593 aa10.52□□□□□ -0.72
CDC42BPA-206ENST00000429440 E2F4Q16254 413 aa10.52□□□□□ -0.72
CDC42BPA-206ENST00000429440 SETBP1Q9Y6X0 1596 aa10.52□□□□□ -0.73
CDC42BPA-206ENST00000429440 ZC3H13Q5T200 1668 aaKnown RBP10.52□□□□□ -0.73
CDC42BPA-206ENST00000429440 ZRANB2O95218 330 aaKnown RBP eCLIP10.52□□□□□ -0.73
CDC42BPA-206ENST00000429440 SLU7O95391 586 aaKnown RBP10.52□□□□□ -0.73
CDC42BPA-206ENST00000429440 PPP2R1AP30153 589 aa10.52□□□□□ -0.73
CDC42BPA-206ENST00000429440 CCDC183Q5T5S1 534 aa10.52□□□□□ -0.73
CDC42BPA-206ENST00000429440 RTF1Q92541 710 aaKnown RBP10.52□□□□□ -0.73
CDC42BPA-206ENST00000429440 ADGRB1O14514 1584 aa10.51□□□□□ -0.73
CDC42BPA-206ENST00000429440 NOS1P29475 1434 aa10.51□□□□□ -0.73
CDC42BPA-206ENST00000429440 KIF2AO00139 706 aaPredicted RBP10.51□□□□□ -0.73
CDC42BPA-206ENST00000429440 ACTN2P35609 894 aa10.51□□□□□ -0.73
CDC42BPA-206ENST00000429440 IFT57Q9NWB7 429 aa10.51□□□□□ -0.73
CDC42BPA-206ENST00000429440 PIK3C2BO00750 1634 aa10.51□□□□□ -0.73
CDC42BPA-206ENST00000429440 CAMSAP1Q5T5Y3 1602 aa10.51□□□□□ -0.73
CDC42BPA-206ENST00000429440 CCDC171Q6TFL3 1326 aa10.51□□□□□ -0.73
CDC42BPA-206ENST00000429440 DIP2CQ9Y2E4 1556 aa10.51□□□□□ -0.73
CDC42BPA-206ENST00000429440 PIK3C2GO75747 1445 aa10.51□□□□□ -0.73
CDC42BPA-206ENST00000429440 RPS6KA5O75582 802 aa10.51□□□□□ -0.73
CDC42BPA-206ENST00000429440 ST5P78524 1137 aa10.51□□□□□ -0.73
CDC42BPA-206ENST00000429440 MAP9Q49MG5 647 aa10.51□□□□□ -0.73
CDC42BPA-206ENST00000429440 RICTORQ6R327 1708 aa10.51□□□□□ -0.73
CDC42BPA-206ENST00000429440 HCLS1P14317 486 aaPredicted RBP10.5□□□□□ -0.73
CDC42BPA-206ENST00000429440 CORO7P57737 925 aa10.5□□□□□ -0.73
CDC42BPA-206ENST00000429440 FAM210AQ96ND0 272 aa10.5□□□□□ -0.73
CDC42BPA-206ENST00000429440 SBNO2Q9Y2G9 1366 aa10.5□□□□□ -0.73
CDC42BPA-206ENST00000429440 REREQ9P2R6 1566 aa10.5□□□□□ -0.73
CDC42BPA-206ENST00000429440 ELP1O95163 1332 aa10.5□□□□□ -0.73
CDC42BPA-206ENST00000429440 EIF3CLB5ME19 914 aaKnown RBP10.5□□□□□ -0.73
CDC42BPA-206ENST00000429440 NUCB1Q02818 461 aa10.5□□□□□ -0.73
CDC42BPA-206ENST00000429440 BIRC2Q13490 618 aa10.5□□□□□ -0.73
CDC42BPA-206ENST00000429440 FAM212AQ96EL1 285 aa10.5□□□□□ -0.73
CDC42BPA-206ENST00000429440 EIF3CQ99613 913 aaKnown RBP10.5□□□□□ -0.73
CDC42BPA-206ENST00000429440 NBPF3Q9H094 633 aa10.5□□□□□ -0.73
CDC42BPA-206ENST00000429440 NEO1Q92859 1461 aa10.5□□□□□ -0.73
CDC42BPA-206ENST00000429440 APAF1O14727 1248 aa10.49□□□□□ -0.73
CDC42BPA-206ENST00000429440 C21orf2O43822 256 aa10.49□□□□□ -0.73
CDC42BPA-206ENST00000429440 BRD1O95696 1058 aa10.49□□□□□ -0.73
CDC42BPA-206ENST00000429440 NPM1P06748 294 aaKnown RBP eCLIP10.49□□□□□ -0.73
CDC42BPA-206ENST00000429440 CLCN6P51797 869 aa10.49□□□□□ -0.73
CDC42BPA-206ENST00000429440 PPP2R5AQ15172 486 aa10.49□□□□□ -0.73
CDC42BPA-206ENST00000429440 TPD52L1Q16890 204 aaPredicted RBP10.49□□□□□ -0.73
CDC42BPA-206ENST00000429440 ARGLU1Q9NWB6 273 aaPredicted RBP10.49□□□□□ -0.73
CDC42BPA-206ENST00000429440 ERBB3P21860 1342 aa10.49□□□□□ -0.73
CDC42BPA-206ENST00000429440 ATAD2Q6PL18 1390 aa10.49□□□□□ -0.73
CDC42BPA-206ENST00000429440 ANKRD33BA6NCL7 494 aa10.49□□□□□ -0.73
CDC42BPA-206ENST00000429440 MX1P20591 662 aa10.49□□□□□ -0.73
CDC42BPA-206ENST00000429440 REXO1L1PQ8IX06 675 aa10.49□□□□□ -0.73
CDC42BPA-206ENST00000429440 CALR3Q96L12 384 aaKnown RBP10.49□□□□□ -0.73
CDC42BPA-206ENST00000429440 POLR3GO15318 223 aaPredicted RBP10.48□□□□□ -0.73
CDC42BPA-206ENST00000429440 PTGS1P23219 599 aa10.48□□□□□ -0.73
CDC42BPA-206ENST00000429440 TBC1D9Q6ZT07 1266 aa10.48□□□□□ -0.73
CDC42BPA-206ENST00000429440 STAG1Q8WVM7 1258 aa10.48□□□□□ -0.73
CDC42BPA-206ENST00000429440 ZSCAN16Q9H4T2 348 aaPredicted RBP10.48□□□□□ -0.73
CDC42BPA-206ENST00000429440 AP5Z1O43299 807 aa10.48□□□□□ -0.73
CDC42BPA-206ENST00000429440 ST18O60284 1047 aa10.48□□□□□ -0.73
CDC42BPA-206ENST00000429440 NYAP1Q6ZVC0 841 aa10.48□□□□□ -0.73
CDC42BPA-206ENST00000429440 EFCAB13Q8IY85 973 aa10.48□□□□□ -0.73
CDC42BPA-206ENST00000429440 BORCS6Q96GS4 357 aa10.48□□□□□ -0.73
CDC42BPA-206ENST00000429440 FUCA2Q9BTY2 467 aa10.48□□□□□ -0.73
CDC42BPA-206ENST00000429440 CARD14Q9BXL6 1004 aa10.48□□□□□ -0.73
CDC42BPA-206ENST00000429440 QRICH2Q9H0J4 1663 aa10.47□□□□□ -0.73
CDC42BPA-206ENST00000429440 H0YHG0 523 aa10.47□□□□□ -0.73
CDC42BPA-206ENST00000429440 RAPGEF3O95398 923 aa10.47□□□□□ -0.73
CDC42BPA-206ENST00000429440 ERCC3P19447 782 aa10.47□□□□□ -0.73
CDC42BPA-206ENST00000429440 SARNPP82979 210 aaKnown RBP10.47□□□□□ -0.73
CDC42BPA-206ENST00000429440 TMCO3Q6UWJ1 677 aa10.47□□□□□ -0.73
CDC42BPA-206ENST00000429440 TMEM87AQ8NBN3 555 aa10.47□□□□□ -0.73
CDC42BPA-206ENST00000429440 SPC24Q8NBT2 197 aa10.47□□□□□ -0.73
CDC42BPA-206ENST00000429440 MKRN1Q9UHC7 482 aaKnown RBP10.47□□□□□ -0.73
CDC42BPA-206ENST00000429440 SGSM2O43147 1006 aa10.47□□□□□ -0.73
CDC42BPA-206ENST00000429440 TPM1P09493 284 aa10.47□□□□□ -0.73
CDC42BPA-206ENST00000429440 USP8P40818 1118 aa10.47□□□□□ -0.73
CDC42BPA-206ENST00000429440 IRX1P78414 480 aaPredicted RBP10.47□□□□□ -0.73
CDC42BPA-206ENST00000429440 ZRSR1Q15695 479 aaKnown RBP10.47□□□□□ -0.73
CDC42BPA-206ENST00000429440 GGT6Q6P531 493 aa10.47□□□□□ -0.73
CDC42BPA-206ENST00000429440 LEKR1Q6ZMV7 388 aa10.47□□□□□ -0.73
CDC42BPA-206ENST00000429440 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.47□□□□□ -0.73
CDC42BPA-206ENST00000429440 FILIP1Q7Z7B0 1213 aa10.47□□□□□ -0.73
CDC42BPA-206ENST00000429440 ZGPATQ8N5A5 531 aaKnown RBP10.47□□□□□ -0.73
CDC42BPA-206ENST00000429440 MRVI1Q9Y6F6 885 aa10.47□□□□□ -0.73
CDC42BPA-206ENST00000429440 L2HGDHQ9H9P8 463 aa10.46□□□□□ -0.73
CDC42BPA-206ENST00000429440 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.46□□□□□ -0.73
CDC42BPA-206ENST00000429440 EXOC6BQ9Y2D4 811 aa10.46□□□□□ -0.73
CDC42BPA-206ENST00000429440 SMC2O95347 1197 aa10.46□□□□□ -0.74
CDC42BPA-206ENST00000429440 PTPN14Q15678 1187 aa10.46□□□□□ -0.74
CDC42BPA-206ENST00000429440 ZSCAN25Q6NSZ9 544 aa10.46□□□□□ -0.74
CDC42BPA-206ENST00000429440 CCDC186Q7Z3E2 898 aa10.46□□□□□ -0.74
CDC42BPA-206ENST00000429440 DNAAF4Q8WXU2 420 aa10.46□□□□□ -0.74
CDC42BPA-206ENST00000429440 C14orf93Q9H972 538 aaKnown RBP10.46□□□□□ -0.74
CDC42BPA-206ENST00000429440 A1CFQ9NQ94 594 aaKnown RBP10.46□□□□□ -0.74
CDC42BPA-206ENST00000429440 KCND1Q9NSA2 647 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms