RNA–Protein interactions for RNA: ENST00000428101.6

LMO1-202, Transcript of LIM domain only 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LMO1, Length 1,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-202ENST00000428101 ZPR1O75312 459 aa36.42■■■■□ 3.42
LMO1-202ENST00000428101 TM4SF1P30408 202 aa36.41■■■■□ 3.42
LMO1-202ENST00000428101 COL15A1P39059 1388 aa36.4■■■■□ 3.42
LMO1-202ENST00000428101 HEG1Q9ULI3 1381 aa36.4■■■■□ 3.42
LMO1-202ENST00000428101 DPEP1P16444 411 aa36.39■■■■□ 3.42
LMO1-202ENST00000428101 NARFQ9UHQ1 456 aa36.39■■■■□ 3.42
LMO1-202ENST00000428101 BRCA1P38398 1863 aaKnown RBP36.38■■■■□ 3.41
LMO1-202ENST00000428101 POLRMTO00411 1230 aaKnown RBP36.37■■■■□ 3.41
LMO1-202ENST00000428101 STARD3NLO95772 234 aa36.37■■■■□ 3.41
LMO1-202ENST00000428101 CANXP27824 592 aaKnown RBP36.37■■■■□ 3.41
LMO1-202ENST00000428101 KCNQ3O43525 872 aa36.35■■■■□ 3.41
LMO1-202ENST00000428101 KCNA3P22001 575 aa36.35■■■■□ 3.41
LMO1-202ENST00000428101 BCL2L12Q9HB09 334 aa36.35■■■■□ 3.41
LMO1-202ENST00000428101 BTBD11A6QL63 1104 aa36.34■■■■□ 3.41
LMO1-202ENST00000428101 EIF5P55010 431 aaKnown RBP36.34■■■■□ 3.41
LMO1-202ENST00000428101 ADCY9O60503 1353 aa36.34■■■■□ 3.41
LMO1-202ENST00000428101 ATP10DQ9P241 1426 aa36.34■■■■□ 3.41
LMO1-202ENST00000428101 FMNL2Q96PY5 1086 aa36.33■■■■□ 3.41
LMO1-202ENST00000428101 TEX13AQ9BXU3 409 aaPredicted RBP36.33■■■■□ 3.41
LMO1-202ENST00000428101 BCS1LQ9Y276 419 aa36.33■■■■□ 3.41
LMO1-202ENST00000428101 MCM10Q7L590 875 aa36.32■■■■□ 3.4
LMO1-202ENST00000428101 C1QTNF8P60827 252 aa36.31■■■■□ 3.4
LMO1-202ENST00000428101 NFIXQ14938 502 aa36.31■■■■□ 3.4
LMO1-202ENST00000428101 AFDNP55196 1824 aaKnown RBP36.31■■■■□ 3.4
LMO1-202ENST00000428101 RTF1Q92541 710 aaKnown RBP36.3■■■■□ 3.4
LMO1-202ENST00000428101 GIGYF1O75420 1035 aaPredicted RBP36.28■■■■□ 3.4
LMO1-202ENST00000428101 DCTN1Q14203 1278 aa36.28■■■■□ 3.4
LMO1-202ENST00000428101 HTATSF1O43719 755 aaKnown RBP36.27■■■■□ 3.4
LMO1-202ENST00000428101 NRXN2Q9P2S2 1712 aa36.27■■■■□ 3.4
LMO1-202ENST00000428101 A0A087WZG4 1122 aa36.25■■■■□ 3.39
LMO1-202ENST00000428101 A1BGP04217 495 aa36.25■■■■□ 3.39
LMO1-202ENST00000428101 ARFGEF1Q9Y6D6 1849 aa36.24■■■■□ 3.39
LMO1-202ENST00000428101 PIM2Q9P1W9 311 aa36.24■■■■□ 3.39
LMO1-202ENST00000428101 CHRNA5P30532 468 aa36.23■■■■□ 3.39
LMO1-202ENST00000428101 IL6STP40189 918 aaPredicted RBP36.23■■■■□ 3.39
LMO1-202ENST00000428101 DLG5Q8TDM6 1919 aa36.22■■■■□ 3.39
LMO1-202ENST00000428101 PLEKHF1Q96S99 279 aa36.22■■■■□ 3.39
LMO1-202ENST00000428101 USP16Q9Y5T5 823 aa36.22■■■■□ 3.39
LMO1-202ENST00000428101 SERPINB2P05120 415 aa36.21■■■■□ 3.39
LMO1-202ENST00000428101 PRAMEF22A3QJZ6 481 aa36.2■■■■□ 3.39
LMO1-202ENST00000428101 ARHGAP27Q6ZUM4 889 aa36.2■■■■□ 3.39
LMO1-202ENST00000428101 TBC1D2BQ9UPU7 963 aa36.2■■■■□ 3.39
LMO1-202ENST00000428101 GPBP1L1Q9HC44 474 aaPredicted RBP36.19■■■■□ 3.38
LMO1-202ENST00000428101 ZNF330Q9Y3S2 320 aaPredicted RBP36.19■■■■□ 3.38
LMO1-202ENST00000428101 SCN7AQ01118 1682 aa36.19■■■■□ 3.38
LMO1-202ENST00000428101 DALRD3Q5D0E6 543 aaKnown RBP36.18■■■■□ 3.38
LMO1-202ENST00000428101 ZNF526Q8TF50 670 aaPredicted RBP36.18■■■■□ 3.38
LMO1-202ENST00000428101 TBC1D9BQ66K14 1250 aa36.17■■■■□ 3.38
LMO1-202ENST00000428101 BICDL1Q6ZP65 573 aa36.17■■■■□ 3.38
LMO1-202ENST00000428101 SNRPA1P09661 255 aaKnown RBP36.16■■■■□ 3.38
LMO1-202ENST00000428101 TAF7Q15545 349 aaPredicted RBP36.16■■■■□ 3.38
LMO1-202ENST00000428101 NEFMP07197 916 aa36.15■■■■□ 3.38
LMO1-202ENST00000428101 RALBP1Q15311 655 aa36.14■■■■□ 3.38
LMO1-202ENST00000428101 PIP4K2AP48426 406 aaPredicted RBP36.13■■■■□ 3.37
LMO1-202ENST00000428101 DDX10Q13206 875 aaKnown RBP36.13■■■■□ 3.37
LMO1-202ENST00000428101 MIS18AQ9NYP9 233 aa36.13■■■■□ 3.37
LMO1-202ENST00000428101 CAMTA2O94983 1202 aa36.12■■■■□ 3.37
LMO1-202ENST00000428101 CARMIL3Q8ND23 1372 aa36.12■■■■□ 3.37
LMO1-202ENST00000428101 NFE2L2Q16236 605 aa36.11■■■■□ 3.37
LMO1-202ENST00000428101 DLEC1Q9Y238 1755 aa36.1■■■■□ 3.37
LMO1-202ENST00000428101 NPM2Q86SE8 214 aaKnown RBP36.09■■■■□ 3.37
LMO1-202ENST00000428101 BCORQ6W2J9 1755 aa36.09■■■■□ 3.37
LMO1-202ENST00000428101 SENP3-EIF4A1A0A087X0R7 540 aa36.08■■■■□ 3.37
LMO1-202ENST00000428101 DZIP3Q86Y13 1208 aaKnown RBP36.08■■■■□ 3.37
LMO1-202ENST00000428101 PNNQ9H307 717 aaKnown RBP36.08■■■■□ 3.37
LMO1-202ENST00000428101 ANKRD31Q8N7Z5 1873 aa36.07■■■■□ 3.36
LMO1-202ENST00000428101 KDM3BQ7LBC6 1761 aa36.06■■■■□ 3.36
LMO1-202ENST00000428101 NBPF26B4DH59 902 aa36.05■■■■□ 3.36
LMO1-202ENST00000428101 NBPF10Q6P3W6 841 aaKnown RBP36.05■■■■□ 3.36
LMO1-202ENST00000428101 NBPF15Q8N660 670 aa36.05■■■■□ 3.36
LMO1-202ENST00000428101 THUMPD2Q9BTF0 503 aaKnown RBP36.05■■■■□ 3.36
LMO1-202ENST00000428101 C9orf131Q5VYM1 1079 aa36.04■■■■□ 3.36
LMO1-202ENST00000428101 C2CD5Q86YS7 1000 aa36.04■■■■□ 3.36
LMO1-202ENST00000428101 MAPK8IP3Q9UPT6 1336 aa36.04■■■■□ 3.36
LMO1-202ENST00000428101 SBF1O95248 1867 aa36.03■■■■□ 3.36
LMO1-202ENST00000428101 PRR5LQ6MZQ0 368 aa36.03■■■■□ 3.36
LMO1-202ENST00000428101 PNISRQ8TF01 805 aaKnown RBP36.03■■■■□ 3.36
LMO1-202ENST00000428101 SETDB2Q96T68 719 aa36.02■■■■□ 3.36
LMO1-202ENST00000428101 H0YIN7 160 aa36.01■■■■□ 3.36
LMO1-202ENST00000428101 CCDC24Q8N4L8 307 aa36.01■■■■□ 3.36
LMO1-202ENST00000428101 LAMB4A4D0S4 1761 aa36■■■■□ 3.35
LMO1-202ENST00000428101 KIF3CO14782 793 aa36■■■■□ 3.35
LMO1-202ENST00000428101 TTLL6Q8N841 843 aa36■■■■□ 3.35
LMO1-202ENST00000428101 BRIP1Q9BX63 1249 aa36■■■■□ 3.35
LMO1-202ENST00000428101 MYBBP1AQ9BQG0 1328 aaKnown RBP35.99■■■■□ 3.35
LMO1-202ENST00000428101 EIF4A1P60842 406 aaKnown RBP35.98■■■■□ 3.35
LMO1-202ENST00000428101 CLEC4GQ6UXB4 293 aa35.98■■■■□ 3.35
LMO1-202ENST00000428101 PDE6BP35913 854 aa35.96■■■■□ 3.35
LMO1-202ENST00000428101 COL11A2P13942 1736 aaPredicted RBP35.95■■■■□ 3.35
LMO1-202ENST00000428101 CNBD1Q8NA66 436 aa35.95■■■■□ 3.35
LMO1-202ENST00000428101 RNF181Q9P0P0 153 aa35.95■■■■□ 3.35
LMO1-202ENST00000428101 PDZRN3Q9UPQ7 1066 aa35.94■■■■□ 3.34
LMO1-202ENST00000428101 RIPK4P57078 832 aa35.93■■■■□ 3.34
LMO1-202ENST00000428101 ZNF652Q9Y2D9 606 aa35.93■■■■□ 3.34
LMO1-202ENST00000428101 RASSF7Q02833 373 aa35.92■■■■□ 3.34
LMO1-202ENST00000428101 RGL2O15211 777 aa35.91■■■■□ 3.34
LMO1-202ENST00000428101 ZNF622Q969S3 477 aaKnown RBP eCLIP35.91■■■■□ 3.34
LMO1-202ENST00000428101 CEP350Q5VT06 3117 aa35.9■■■■□ 3.34
LMO1-202ENST00000428101 NPHP1O15259 732 aa35.89■■■■□ 3.34
LMO1-202ENST00000428101 TMPOP42166 694 aaKnown RBP35.89■■■■□ 3.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms