RNA–Protein interactions for RNA: ENST00000427755.2

DEPDC7-203, Transcript of DEP domain containing 7, humanhuman

TSL 2

Gene DEPDC7, Length 1,212 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-203ENST00000427755 KIF3CO14782 793 aa17.58■□□□□ 0.4
DEPDC7-203ENST00000427755 ARHGAP27Q6ZUM4 889 aa17.58■□□□□ 0.4
DEPDC7-203ENST00000427755 PIM2Q9P1W9 311 aa17.58■□□□□ 0.4
DEPDC7-203ENST00000427755 N4BP2Q86UW6 1770 aaPredicted RBP17.58■□□□□ 0.4
DEPDC7-203ENST00000427755 GNAT3A8MTJ3 354 aa17.57■□□□□ 0.4
DEPDC7-203ENST00000427755 CHRNA5P30532 468 aa17.57■□□□□ 0.4
DEPDC7-203ENST00000427755 NFIXQ14938 502 aa17.57■□□□□ 0.4
DEPDC7-203ENST00000427755 ZNF496Q96IT1 587 aaPredicted RBP17.57■□□□□ 0.4
DEPDC7-203ENST00000427755 ZNF790Q6PG37 636 aa17.56■□□□□ 0.4
DEPDC7-203ENST00000427755 TTC5Q8N0Z6 440 aa17.56■□□□□ 0.4
DEPDC7-203ENST00000427755 PHACTR3Q96KR7 559 aa17.56■□□□□ 0.4
DEPDC7-203ENST00000427755 RSPH6AQ9H0K4 717 aa17.56■□□□□ 0.4
DEPDC7-203ENST00000427755 CEMIPQ8WUJ3 1361 aa17.55■□□□□ 0.4
DEPDC7-203ENST00000427755 CANXP27824 592 aaKnown RBP17.55■□□□□ 0.4
DEPDC7-203ENST00000427755 EIF5P55010 431 aaKnown RBP17.55■□□□□ 0.4
DEPDC7-203ENST00000427755 DALRD3Q5D0E6 543 aaKnown RBP17.55■□□□□ 0.4
DEPDC7-203ENST00000427755 HEG1Q9ULI3 1381 aa17.54■□□□□ 0.4
DEPDC7-203ENST00000427755 STARD3NLO95772 234 aa17.54■□□□□ 0.4
DEPDC7-203ENST00000427755 PRKAR2BP31323 418 aa17.54■□□□□ 0.4
DEPDC7-203ENST00000427755 TEFQ10587 303 aa17.54■□□□□ 0.4
DEPDC7-203ENST00000427755 CFAP53Q96M91 514 aa17.53■□□□□ 0.4
DEPDC7-203ENST00000427755 SERPINB2P05120 415 aa17.52■□□□□ 0.4
DEPDC7-203ENST00000427755 HSPA6P17066 643 aa17.52■□□□□ 0.4
DEPDC7-203ENST00000427755 PPP2R1AP30153 589 aa17.52■□□□□ 0.4
DEPDC7-203ENST00000427755 C9orf131Q5VYM1 1079 aa17.52■□□□□ 0.4
DEPDC7-203ENST00000427755 UBR2Q8IWV8 1755 aa17.52■□□□□ 0.4
DEPDC7-203ENST00000427755 BRCA1P38398 1863 aaKnown RBP17.52■□□□□ 0.39
DEPDC7-203ENST00000427755 KCNQ3O43525 872 aa17.51■□□□□ 0.39
DEPDC7-203ENST00000427755 TEX13AQ9BXU3 409 aaPredicted RBP17.51■□□□□ 0.39
DEPDC7-203ENST00000427755 A0A087WZG4 1122 aa17.5■□□□□ 0.39
DEPDC7-203ENST00000427755 FMNL2Q96PY5 1086 aa17.5■□□□□ 0.39
DEPDC7-203ENST00000427755 NUDCQ9Y266 331 aa17.5■□□□□ 0.39
DEPDC7-203ENST00000427755 NMRK2Q9NPI5 230 aa17.49■□□□□ 0.39
DEPDC7-203ENST00000427755 CARMIL3Q8ND23 1372 aa17.49■□□□□ 0.39
DEPDC7-203ENST00000427755 NRXN2Q9P2S2 1712 aa17.48■□□□□ 0.39
DEPDC7-203ENST00000427755 BTBD11A6QL63 1104 aa17.48■□□□□ 0.39
DEPDC7-203ENST00000427755 A1BGP04217 495 aa17.48■□□□□ 0.39
DEPDC7-203ENST00000427755 U2AF1L5P0DN76 240 aaPredicted RBP17.48■□□□□ 0.39
DEPDC7-203ENST00000427755 IL6STP40189 918 aaPredicted RBP17.48■□□□□ 0.39
DEPDC7-203ENST00000427755 U2AF1Q01081 240 aaKnown RBP eCLIP17.48■□□□□ 0.39
DEPDC7-203ENST00000427755 TBC1D9BQ66K14 1250 aa17.48■□□□□ 0.39
DEPDC7-203ENST00000427755 BICDL1Q6ZP65 573 aa17.48■□□□□ 0.39
DEPDC7-203ENST00000427755 RNF181Q9P0P0 153 aa17.47■□□□□ 0.39
DEPDC7-203ENST00000427755 TBC1D2BQ9UPU7 963 aa17.47■□□□□ 0.39
DEPDC7-203ENST00000427755 TOMM70O94826 608 aa17.46■□□□□ 0.39
DEPDC7-203ENST00000427755 MCM10Q7L590 875 aa17.46■□□□□ 0.39
DEPDC7-203ENST00000427755 USP16Q9Y5T5 823 aa17.46■□□□□ 0.39
DEPDC7-203ENST00000427755 SIPA1L3O60292 1781 aaPredicted RBP17.45■□□□□ 0.38
DEPDC7-203ENST00000427755 VIRMAQ69YN4 1812 aaKnown RBP17.45■□□□□ 0.38
DEPDC7-203ENST00000427755 ARFGEF1Q9Y6D6 1849 aa17.45■□□□□ 0.38
DEPDC7-203ENST00000427755 CAMTA2O94983 1202 aa17.45■□□□□ 0.38
DEPDC7-203ENST00000427755 RASSF7Q02833 373 aa17.45■□□□□ 0.38
DEPDC7-203ENST00000427755 C2CD5Q86YS7 1000 aa17.45■□□□□ 0.38
DEPDC7-203ENST00000427755 TTLL6Q8N841 843 aa17.45■□□□□ 0.38
DEPDC7-203ENST00000427755 ZNF330Q9Y3S2 320 aaPredicted RBP17.45■□□□□ 0.38
DEPDC7-203ENST00000427755 PRAMEF22A3QJZ6 481 aa17.44■□□□□ 0.38
DEPDC7-203ENST00000427755 PRELPP51888 382 aa17.44■□□□□ 0.38
DEPDC7-203ENST00000427755 CEP350Q5VT06 3117 aa17.44■□□□□ 0.38
DEPDC7-203ENST00000427755 DCTN1Q14203 1278 aa17.43■□□□□ 0.38
DEPDC7-203ENST00000427755 PRR5LQ6MZQ0 368 aa17.43■□□□□ 0.38
DEPDC7-203ENST00000427755 RTF1Q92541 710 aaKnown RBP17.43■□□□□ 0.38
DEPDC7-203ENST00000427755 H0YIN7 160 aa17.42■□□□□ 0.38
DEPDC7-203ENST00000427755 HTATSF1O43719 755 aaKnown RBP17.42■□□□□ 0.38
DEPDC7-203ENST00000427755 PIP4K2AP48426 406 aaPredicted RBP17.42■□□□□ 0.38
DEPDC7-203ENST00000427755 BRIP1Q9BX63 1249 aa17.42■□□□□ 0.38
DEPDC7-203ENST00000427755 AFDNP55196 1824 aaKnown RBP17.42■□□□□ 0.38
DEPDC7-203ENST00000427755 SNRPA1P09661 255 aaKnown RBP17.41■□□□□ 0.38
DEPDC7-203ENST00000427755 DZIP3Q86Y13 1208 aaKnown RBP17.41■□□□□ 0.38
DEPDC7-203ENST00000427755 CCDC24Q8N4L8 307 aa17.41■□□□□ 0.38
DEPDC7-203ENST00000427755 RBM46Q8TBY0 533 aaKnown RBP17.41■□□□□ 0.38
DEPDC7-203ENST00000427755 SCN7AQ01118 1682 aa17.41■□□□□ 0.38
DEPDC7-203ENST00000427755 NFKBIEO00221 500 aa17.4■□□□□ 0.38
DEPDC7-203ENST00000427755 LMNB1P20700 586 aa17.4■□□□□ 0.38
DEPDC7-203ENST00000427755 KDM2BQ8NHM5 1336 aa17.4■□□□□ 0.38
DEPDC7-203ENST00000427755 ZC3H4Q9UPT8 1303 aaKnown RBP17.4■□□□□ 0.38
DEPDC7-203ENST00000427755 PDE6BP35913 854 aa17.39■□□□□ 0.37
DEPDC7-203ENST00000427755 APLP1P51693 650 aa17.39■□□□□ 0.37
DEPDC7-203ENST00000427755 SETDB2Q96T68 719 aa17.39■□□□□ 0.37
DEPDC7-203ENST00000427755 PDZRN3Q9UPQ7 1066 aa17.39■□□□□ 0.37
DEPDC7-203ENST00000427755 NBPF26B4DH59 902 aa17.38■□□□□ 0.37
DEPDC7-203ENST00000427755 NBPF10Q6P3W6 841 aaKnown RBP17.38■□□□□ 0.37
DEPDC7-203ENST00000427755 NPM2Q86SE8 214 aaKnown RBP17.38■□□□□ 0.37
DEPDC7-203ENST00000427755 NBPF15Q8N660 670 aa17.38■□□□□ 0.37
DEPDC7-203ENST00000427755 CNBD1Q8NA66 436 aa17.38■□□□□ 0.37
DEPDC7-203ENST00000427755 ZNF622Q969S3 477 aaKnown RBP eCLIP17.38■□□□□ 0.37
DEPDC7-203ENST00000427755 PLEKHF1Q96S99 279 aa17.38■□□□□ 0.37
DEPDC7-203ENST00000427755 RRAGCQ9HB90 399 aa17.38■□□□□ 0.37
DEPDC7-203ENST00000427755 TAF7Q15545 349 aaPredicted RBP17.37■□□□□ 0.37
DEPDC7-203ENST00000427755 CLEC4GQ6UXB4 293 aa17.37■□□□□ 0.37
DEPDC7-203ENST00000427755 DLEC1Q9Y238 1755 aa17.36■□□□□ 0.37
DEPDC7-203ENST00000427755 DNAJC5GQ8N7S2 189 aa17.36■□□□□ 0.37
DEPDC7-203ENST00000427755 MIS18AQ9NYP9 233 aa17.36■□□□□ 0.37
DEPDC7-203ENST00000427755 GLTPD2A6NH11 291 aa17.35■□□□□ 0.37
DEPDC7-203ENST00000427755 C21orf2O43822 256 aa17.35■□□□□ 0.37
DEPDC7-203ENST00000427755 SRGNP10124 158 aa17.35■□□□□ 0.37
DEPDC7-203ENST00000427755 FSTL1Q12841 308 aa17.35■□□□□ 0.37
DEPDC7-203ENST00000427755 C16orf71Q8IYS4 520 aaPredicted RBP17.35■□□□□ 0.37
DEPDC7-203ENST00000427755 RGL2O15211 777 aa17.34■□□□□ 0.37
DEPDC7-203ENST00000427755 ST5P78524 1137 aa17.34■□□□□ 0.37
DEPDC7-203ENST00000427755 STYK1Q6J9G0 422 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms