RNA–Protein interactions for RNA: ENST00000427469.5

RCC1-207, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 5

Gene RCC1, Length 903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-207ENST00000427469 ZNF496Q96IT1 587 aaPredicted RBP17.51■□□□□ 0.39
RCC1-207ENST00000427469 SBF1O95248 1867 aa17.5■□□□□ 0.39
RCC1-207ENST00000427469 FKBP8Q14318 412 aa17.5■□□□□ 0.39
RCC1-207ENST00000427469 ZNF784Q8NCA9 323 aaPredicted RBP17.5■□□□□ 0.39
RCC1-207ENST00000427469 COL11A2P13942 1736 aaPredicted RBP17.5■□□□□ 0.39
RCC1-207ENST00000427469 DDR1Q08345 913 aa17.49■□□□□ 0.39
RCC1-207ENST00000427469 TEFQ10587 303 aa17.49■□□□□ 0.39
RCC1-207ENST00000427469 PLEKHF1Q96S99 279 aa17.49■□□□□ 0.39
RCC1-207ENST00000427469 ADCY9O60503 1353 aa17.49■□□□□ 0.39
RCC1-207ENST00000427469 KCNQ3O43525 872 aa17.47■□□□□ 0.39
RCC1-207ENST00000427469 PELP1Q8IZL8 1130 aaKnown RBP17.47■□□□□ 0.39
RCC1-207ENST00000427469 TTC5Q8N0Z6 440 aa17.47■□□□□ 0.39
RCC1-207ENST00000427469 BCL2L12Q9HB09 334 aa17.47■□□□□ 0.39
RCC1-207ENST00000427469 ARFGEF2Q9Y6D5 1785 aa17.47■□□□□ 0.39
RCC1-207ENST00000427469 POLRMTO00411 1230 aaKnown RBP17.46■□□□□ 0.39
RCC1-207ENST00000427469 HTATSF1O43719 755 aaKnown RBP17.46■□□□□ 0.39
RCC1-207ENST00000427469 GRIN3BO60391 1043 aa17.46■□□□□ 0.39
RCC1-207ENST00000427469 TM4SF1P30408 202 aa17.46■□□□□ 0.39
RCC1-207ENST00000427469 EIF5P55010 431 aaKnown RBP17.46■□□□□ 0.39
RCC1-207ENST00000427469 CACNA1SQ13698 1873 aa17.46■□□□□ 0.38
RCC1-207ENST00000427469 NUP98P52948 1817 aa17.45■□□□□ 0.38
RCC1-207ENST00000427469 RALBP1Q15311 655 aa17.45■□□□□ 0.38
RCC1-207ENST00000427469 MCM10Q7L590 875 aa17.45■□□□□ 0.38
RCC1-207ENST00000427469 NARFQ9UHQ1 456 aa17.45■□□□□ 0.38
RCC1-207ENST00000427469 CCDC88AQ3V6T2 1871 aa17.44■□□□□ 0.38
RCC1-207ENST00000427469 TGFB2P61812 414 aa17.44■□□□□ 0.38
RCC1-207ENST00000427469 DCTN1Q14203 1278 aa17.44■□□□□ 0.38
RCC1-207ENST00000427469 USPL1Q5W0Q7 1092 aa17.44■□□□□ 0.38
RCC1-207ENST00000427469 FMNL2Q96PY5 1086 aa17.44■□□□□ 0.38
RCC1-207ENST00000427469 BTBD11A6QL63 1104 aa17.43■□□□□ 0.38
RCC1-207ENST00000427469 KCNA3P22001 575 aa17.43■□□□□ 0.38
RCC1-207ENST00000427469 PARP3Q9Y6F1 533 aa17.43■□□□□ 0.38
RCC1-207ENST00000427469 STARD3NLO95772 234 aa17.42■□□□□ 0.38
RCC1-207ENST00000427469 DDX10Q13206 875 aaKnown RBP17.42■□□□□ 0.38
RCC1-207ENST00000427469 PRAMEF22A3QJZ6 481 aa17.41■□□□□ 0.38
RCC1-207ENST00000427469 ZPR1O75312 459 aa17.41■□□□□ 0.38
RCC1-207ENST00000427469 NFIXQ14938 502 aa17.41■□□□□ 0.38
RCC1-207ENST00000427469 TEX13AQ9BXU3 409 aaPredicted RBP17.41■□□□□ 0.38
RCC1-207ENST00000427469 MYBBP1AQ9BQG0 1328 aaKnown RBP17.41■□□□□ 0.38
RCC1-207ENST00000427469 CARMIL3Q8ND23 1372 aa17.4■□□□□ 0.38
RCC1-207ENST00000427469 DPEP1P16444 411 aa17.4■□□□□ 0.38
RCC1-207ENST00000427469 CANXP27824 592 aaKnown RBP17.4■□□□□ 0.38
RCC1-207ENST00000427469 IL6STP40189 918 aaPredicted RBP17.4■□□□□ 0.38
RCC1-207ENST00000427469 RTF1Q92541 710 aaKnown RBP17.4■□□□□ 0.38
RCC1-207ENST00000427469 WWC3Q9ULE0 1092 aa17.4■□□□□ 0.38
RCC1-207ENST00000427469 CEP350Q5VT06 3117 aa17.4■□□□□ 0.38
RCC1-207ENST00000427469 FER1L6Q2WGJ9 1857 aa17.39■□□□□ 0.38
RCC1-207ENST00000427469 ATP10DQ9P241 1426 aa17.39■□□□□ 0.38
RCC1-207ENST00000427469 A0A0G2JLW4 131 aa17.39■□□□□ 0.37
RCC1-207ENST00000427469 NFE2L2Q16236 605 aa17.39■□□□□ 0.37
RCC1-207ENST00000427469 DICER1Q9UPY3 1922 aaKnown RBP17.39■□□□□ 0.37
RCC1-207ENST00000427469 A1BGP04217 495 aa17.38■□□□□ 0.37
RCC1-207ENST00000427469 USP16Q9Y5T5 823 aa17.38■□□□□ 0.37
RCC1-207ENST00000427469 ANKRD36CQ5JPF3 1778 aa17.38■□□□□ 0.37
RCC1-207ENST00000427469 TIAM2Q8IVF5 1701 aa17.37■□□□□ 0.37
RCC1-207ENST00000427469 A0A087WZG4 1122 aa17.36■□□□□ 0.37
RCC1-207ENST00000427469 CAMTA2O94983 1202 aa17.36■□□□□ 0.37
RCC1-207ENST00000427469 TAF7Q15545 349 aaPredicted RBP17.36■□□□□ 0.37
RCC1-207ENST00000427469 SNRPA1P09661 255 aaKnown RBP17.35■□□□□ 0.37
RCC1-207ENST00000427469 THUMPD2Q9BTF0 503 aaKnown RBP17.35■□□□□ 0.37
RCC1-207ENST00000427469 TNRC6CQ9HCJ0 1690 aaKnown RBP17.35■□□□□ 0.37
RCC1-207ENST00000427469 SLX4Q8IY92 1834 aa17.35■□□□□ 0.37
RCC1-207ENST00000427469 NBPF26B4DH59 902 aa17.34■□□□□ 0.37
RCC1-207ENST00000427469 TBC1D9BQ66K14 1250 aa17.34■□□□□ 0.37
RCC1-207ENST00000427469 NBPF10Q6P3W6 841 aaKnown RBP17.34■□□□□ 0.37
RCC1-207ENST00000427469 NBPF15Q8N660 670 aa17.34■□□□□ 0.37
RCC1-207ENST00000427469 MAPK8IP3Q9UPT6 1336 aa17.33■□□□□ 0.36
RCC1-207ENST00000427469 SERPINB2P05120 415 aa17.33■□□□□ 0.36
RCC1-207ENST00000427469 CHRNA5P30532 468 aa17.33■□□□□ 0.36
RCC1-207ENST00000427469 PIP4K2AP48426 406 aaPredicted RBP17.33■□□□□ 0.36
RCC1-207ENST00000427469 PRKRIP1Q9H875 184 aaPredicted RBP17.33■□□□□ 0.36
RCC1-207ENST00000427469 MIS18AQ9NYP9 233 aa17.33■□□□□ 0.36
RCC1-207ENST00000427469 TBC1D2BQ9UPU7 963 aa17.33■□□□□ 0.36
RCC1-207ENST00000427469 BCS1LQ9Y276 419 aa17.33■□□□□ 0.36
RCC1-207ENST00000427469 EIF4A1P60842 406 aaKnown RBP17.32■□□□□ 0.36
RCC1-207ENST00000427469 PNNQ9H307 717 aaKnown RBP17.32■□□□□ 0.36
RCC1-207ENST00000427469 GIGYF1O75420 1035 aaPredicted RBP17.31■□□□□ 0.36
RCC1-207ENST00000427469 NEFMP07197 916 aa17.31■□□□□ 0.36
RCC1-207ENST00000427469 PNISRQ8TF01 805 aaKnown RBP17.31■□□□□ 0.36
RCC1-207ENST00000427469 PIM2Q9P1W9 311 aa17.31■□□□□ 0.36
RCC1-207ENST00000427469 RGL2O15211 777 aa17.3■□□□□ 0.36
RCC1-207ENST00000427469 TMPOP42166 694 aaKnown RBP17.3■□□□□ 0.36
RCC1-207ENST00000427469 DZIP3Q86Y13 1208 aaKnown RBP17.3■□□□□ 0.36
RCC1-207ENST00000427469 PRR5LQ6MZQ0 368 aa17.29■□□□□ 0.36
RCC1-207ENST00000427469 ZNF330Q9Y3S2 320 aaPredicted RBP17.29■□□□□ 0.36
RCC1-207ENST00000427469 LAMB2P55268 1798 aa17.29■□□□□ 0.36
RCC1-207ENST00000427469 DALRD3Q5D0E6 543 aaKnown RBP17.28■□□□□ 0.36
RCC1-207ENST00000427469 BICDL1Q6ZP65 573 aa17.28■□□□□ 0.36
RCC1-207ENST00000427469 CLEC4GQ6UXB4 293 aa17.27■□□□□ 0.36
RCC1-207ENST00000427469 RIPK4P57078 832 aa17.26■□□□□ 0.35
RCC1-207ENST00000427469 C1QTNF8P60827 252 aa17.26■□□□□ 0.35
RCC1-207ENST00000427469 LRP10Q7Z4F1 713 aa17.26■□□□□ 0.35
RCC1-207ENST00000427469 CCDC146Q8IYE0 955 aa17.25■□□□□ 0.35
RCC1-207ENST00000427469 BABAM1Q9NWV8 329 aa17.25■□□□□ 0.35
RCC1-207ENST00000427469 ADAMTS8Q9UP79 889 aa17.25■□□□□ 0.35
RCC1-207ENST00000427469 TRIM35Q9UPQ4 493 aa17.25■□□□□ 0.35
RCC1-207ENST00000427469 LMOD3Q0VAK6 560 aa17.24■□□□□ 0.35
RCC1-207ENST00000427469 ARHGAP27Q6ZUM4 889 aa17.24■□□□□ 0.35
RCC1-207ENST00000427469 RUNDC1Q96C34 613 aa17.24■□□□□ 0.35
RCC1-207ENST00000427469 BRIP1Q9BX63 1249 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms