RNA–Protein interactions for RNA: ENST00000427417.1

COMMD1-202, Transcript of copper metabolism domain containing 1, humanhuman

TSL 5

Gene COMMD1, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-202ENST00000427417 A0A0G2JLW4 131 aa13.53□□□□□ -0.24
COMMD1-202ENST00000427417 BTBD11A6QL63 1104 aa13.53□□□□□ -0.24
COMMD1-202ENST00000427417 HTATSF1O43719 755 aaKnown RBP13.53□□□□□ -0.24
COMMD1-202ENST00000427417 RALBP1Q15311 655 aa13.53□□□□□ -0.24
COMMD1-202ENST00000427417 FMNL2Q96PY5 1086 aa13.53□□□□□ -0.24
COMMD1-202ENST00000427417 ZBTB1Q9Y2K1 713 aa13.53□□□□□ -0.24
COMMD1-202ENST00000427417 HEG1Q9ULI3 1381 aa13.53□□□□□ -0.24
COMMD1-202ENST00000427417 SIPA1L3O60292 1781 aaPredicted RBP13.53□□□□□ -0.24
COMMD1-202ENST00000427417 DDR1Q08345 913 aa13.52□□□□□ -0.25
COMMD1-202ENST00000427417 ZNF496Q96IT1 587 aaPredicted RBP13.52□□□□□ -0.25
COMMD1-202ENST00000427417 COL15A1P39059 1388 aa13.52□□□□□ -0.25
COMMD1-202ENST00000427417 ATP10DQ9P241 1426 aa13.51□□□□□ -0.25
COMMD1-202ENST00000427417 DPEP1P16444 411 aa13.51□□□□□ -0.25
COMMD1-202ENST00000427417 USPL1Q5W0Q7 1092 aa13.51□□□□□ -0.25
COMMD1-202ENST00000427417 NPM2Q86SE8 214 aaKnown RBP13.51□□□□□ -0.25
COMMD1-202ENST00000427417 NARFQ9UHQ1 456 aa13.51□□□□□ -0.25
COMMD1-202ENST00000427417 A0A087WZG4 1122 aa13.5□□□□□ -0.25
COMMD1-202ENST00000427417 KCNQ3O43525 872 aa13.5□□□□□ -0.25
COMMD1-202ENST00000427417 CANXP27824 592 aaKnown RBP13.5□□□□□ -0.25
COMMD1-202ENST00000427417 MCM10Q7L590 875 aa13.5□□□□□ -0.25
COMMD1-202ENST00000427417 ZNF526Q8TF50 670 aaPredicted RBP13.5□□□□□ -0.25
COMMD1-202ENST00000427417 BCS1LQ9Y276 419 aa13.5□□□□□ -0.25
COMMD1-202ENST00000427417 BRCA1P38398 1863 aaKnown RBP13.49□□□□□ -0.25
COMMD1-202ENST00000427417 MAPK8IP3Q9UPT6 1336 aa13.49□□□□□ -0.25
COMMD1-202ENST00000427417 DDX10Q13206 875 aaKnown RBP13.49□□□□□ -0.25
COMMD1-202ENST00000427417 ADCY9O60503 1353 aa13.48□□□□□ -0.25
COMMD1-202ENST00000427417 GIGYF1O75420 1035 aaPredicted RBP13.48□□□□□ -0.25
COMMD1-202ENST00000427417 TM4SF1P30408 202 aa13.48□□□□□ -0.25
COMMD1-202ENST00000427417 EIF5P55010 431 aaKnown RBP13.48□□□□□ -0.25
COMMD1-202ENST00000427417 C1QTNF8P60827 252 aa13.48□□□□□ -0.25
COMMD1-202ENST00000427417 BCL2L12Q9HB09 334 aa13.48□□□□□ -0.25
COMMD1-202ENST00000427417 POLRMTO00411 1230 aaKnown RBP13.47□□□□□ -0.25
COMMD1-202ENST00000427417 CHRNA5P30532 468 aa13.47□□□□□ -0.25
COMMD1-202ENST00000427417 IL6STP40189 918 aaPredicted RBP13.47□□□□□ -0.25
COMMD1-202ENST00000427417 DCTN1Q14203 1278 aa13.47□□□□□ -0.25
COMMD1-202ENST00000427417 TAF7Q15545 349 aaPredicted RBP13.47□□□□□ -0.25
COMMD1-202ENST00000427417 ZNF330Q9Y3S2 320 aaPredicted RBP13.47□□□□□ -0.25
COMMD1-202ENST00000427417 AFDNP55196 1824 aaKnown RBP13.47□□□□□ -0.25
COMMD1-202ENST00000427417 MYBBP1AQ9BQG0 1328 aaKnown RBP13.46□□□□□ -0.25
COMMD1-202ENST00000427417 SNRPA1P09661 255 aaKnown RBP13.46□□□□□ -0.25
COMMD1-202ENST00000427417 KCNA3P22001 575 aa13.46□□□□□ -0.25
COMMD1-202ENST00000427417 NFIXQ14938 502 aa13.46□□□□□ -0.25
COMMD1-202ENST00000427417 NFE2L2Q16236 605 aa13.46□□□□□ -0.25
COMMD1-202ENST00000427417 PNISRQ8TF01 805 aaKnown RBP13.46□□□□□ -0.25
COMMD1-202ENST00000427417 PLEKHF1Q96S99 279 aa13.46□□□□□ -0.25
COMMD1-202ENST00000427417 SENP3-EIF4A1A0A087X0R7 540 aa13.45□□□□□ -0.26
COMMD1-202ENST00000427417 PIP4K2AP48426 406 aaPredicted RBP13.45□□□□□ -0.26
COMMD1-202ENST00000427417 PIM2Q9P1W9 311 aa13.45□□□□□ -0.26
COMMD1-202ENST00000427417 PRAMEF22A3QJZ6 481 aa13.44□□□□□ -0.26
COMMD1-202ENST00000427417 A1BGP04217 495 aa13.44□□□□□ -0.26
COMMD1-202ENST00000427417 BICDL1Q6ZP65 573 aa13.44□□□□□ -0.26
COMMD1-202ENST00000427417 ARHGAP27Q6ZUM4 889 aa13.44□□□□□ -0.26
COMMD1-202ENST00000427417 CARMIL3Q8ND23 1372 aa13.44□□□□□ -0.26
COMMD1-202ENST00000427417 SERPINB2P05120 415 aa13.43□□□□□ -0.26
COMMD1-202ENST00000427417 GPBP1L1Q9HC44 474 aaPredicted RBP13.43□□□□□ -0.26
COMMD1-202ENST00000427417 NRXN2Q9P2S2 1712 aa13.43□□□□□ -0.26
COMMD1-202ENST00000427417 TBC1D2BQ9UPU7 963 aa13.43□□□□□ -0.26
COMMD1-202ENST00000427417 USP16Q9Y5T5 823 aa13.43□□□□□ -0.26
COMMD1-202ENST00000427417 ARFGEF1Q9Y6D6 1849 aa13.43□□□□□ -0.26
COMMD1-202ENST00000427417 SCN7AQ01118 1682 aa13.43□□□□□ -0.26
COMMD1-202ENST00000427417 DLG5Q8TDM6 1919 aa13.43□□□□□ -0.26
COMMD1-202ENST00000427417 ZEB1P37275 1124 aaPredicted RBP13.42□□□□□ -0.26
COMMD1-202ENST00000427417 DALRD3Q5D0E6 543 aaKnown RBP13.42□□□□□ -0.26
COMMD1-202ENST00000427417 LMOD3Q0VAK6 560 aa13.41□□□□□ -0.26
COMMD1-202ENST00000427417 TBC1D9BQ66K14 1250 aa13.41□□□□□ -0.26
COMMD1-202ENST00000427417 DZIP3Q86Y13 1208 aaKnown RBP13.41□□□□□ -0.26
COMMD1-202ENST00000427417 CCDC24Q8N4L8 307 aa13.41□□□□□ -0.26
COMMD1-202ENST00000427417 MIS18AQ9NYP9 233 aa13.41□□□□□ -0.26
COMMD1-202ENST00000427417 ZNF652Q9Y2D9 606 aa13.41□□□□□ -0.26
COMMD1-202ENST00000427417 CAMTA2O94983 1202 aa13.4□□□□□ -0.26
COMMD1-202ENST00000427417 WDR43Q15061 677 aaKnown RBP eCLIP13.4□□□□□ -0.26
COMMD1-202ENST00000427417 SETDB2Q96T68 719 aa13.4□□□□□ -0.26
COMMD1-202ENST00000427417 PDZRN3Q9UPQ7 1066 aa13.4□□□□□ -0.26
COMMD1-202ENST00000427417 NPHP1O15259 732 aa13.39□□□□□ -0.27
COMMD1-202ENST00000427417 RIPK4P57078 832 aa13.39□□□□□ -0.27
COMMD1-202ENST00000427417 CLEC4GQ6UXB4 293 aa13.39□□□□□ -0.27
COMMD1-202ENST00000427417 THUMPD2Q9BTF0 503 aaKnown RBP13.39□□□□□ -0.27
COMMD1-202ENST00000427417 BCORQ6W2J9 1755 aa13.39□□□□□ -0.27
COMMD1-202ENST00000427417 ANKRD31Q8N7Z5 1873 aa13.39□□□□□ -0.27
COMMD1-202ENST00000427417 DLEC1Q9Y238 1755 aa13.38□□□□□ -0.27
COMMD1-202ENST00000427417 H0YIN7 160 aa13.38□□□□□ -0.27
COMMD1-202ENST00000427417 RGL2O15211 777 aa13.38□□□□□ -0.27
COMMD1-202ENST00000427417 C9orf131Q5VYM1 1079 aa13.38□□□□□ -0.27
COMMD1-202ENST00000427417 BRIP1Q9BX63 1249 aa13.38□□□□□ -0.27
COMMD1-202ENST00000427417 PRKRIP1Q9H875 184 aaPredicted RBP13.38□□□□□ -0.27
COMMD1-202ENST00000427417 COL11A2P13942 1736 aaPredicted RBP13.37□□□□□ -0.27
COMMD1-202ENST00000427417 KIF3CO14782 793 aa13.37□□□□□ -0.27
COMMD1-202ENST00000427417 PDE6BP35913 854 aa13.37□□□□□ -0.27
COMMD1-202ENST00000427417 TMPOP42166 694 aaKnown RBP13.37□□□□□ -0.27
COMMD1-202ENST00000427417 EIF4A1P60842 406 aaKnown RBP13.37□□□□□ -0.27
COMMD1-202ENST00000427417 ST5P78524 1137 aa13.37□□□□□ -0.27
COMMD1-202ENST00000427417 RASSF7Q02833 373 aa13.37□□□□□ -0.27
COMMD1-202ENST00000427417 C2CD5Q86YS7 1000 aa13.37□□□□□ -0.27
COMMD1-202ENST00000427417 CNBD1Q8NA66 436 aa13.37□□□□□ -0.27
COMMD1-202ENST00000427417 BABAM1Q9NWV8 329 aa13.37□□□□□ -0.27
COMMD1-202ENST00000427417 TSPYL4Q9UJ04 414 aa13.37□□□□□ -0.27
COMMD1-202ENST00000427417 KDM3BQ7LBC6 1761 aa13.36□□□□□ -0.27
COMMD1-202ENST00000427417 PRR5LQ6MZQ0 368 aa13.36□□□□□ -0.27
COMMD1-202ENST00000427417 TTLL6Q8N841 843 aa13.36□□□□□ -0.27
COMMD1-202ENST00000427417 RUNDC1Q96C34 613 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms