RNA–Protein interactions for RNA: ENST00000427376.6

TCP11-208, Transcript of t-complex 11, human

TSL 5

Gene TCP11, Length 1,180 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCP11-208	ENST00000427376	POTEI	P0CG38	1075 aa		13.84	□□□□□ -0.19
TCP11-208	ENST00000427376	CFAP70	Q5T0N1	1121 aa		13.84	□□□□□ -0.19
TCP11-208	ENST00000427376	FCHSD2	O94868	740 aa		13.83	□□□□□ -0.2
TCP11-208	ENST00000427376	COL18A1	P39060	1754 aa		13.82	□□□□□ -0.2
TCP11-208	ENST00000427376		A0A0G2JLW4	131 aa		13.82	□□□□□ -0.2
TCP11-208	ENST00000427376	PLEKHG3	A1L390	1219 aa		13.82	□□□□□ -0.2
TCP11-208	ENST00000427376	GRXCR2	A6NFK2	248 aa		13.82	□□□□□ -0.2
TCP11-208	ENST00000427376	HMGB2	P26583	209 aa	Known RBP	13.81	□□□□□ -0.2
TCP11-208	ENST00000427376	MAP2K1	Q02750	393 aa	Predicted RBP	13.81	□□□□□ -0.2
TCP11-208	ENST00000427376	ZC3H4	Q9UPT8	1303 aa	Known RBP	13.81	□□□□□ -0.2
TCP11-208	ENST00000427376	GLTPD2	A6NH11	291 aa		13.8	□□□□□ -0.2
TCP11-208	ENST00000427376	TBC1D12	O60347	775 aa		13.8	□□□□□ -0.2
TCP11-208	ENST00000427376	SPATA31E1	Q6ZUB1	1445 aa		13.8	□□□□□ -0.2
TCP11-208	ENST00000427376	PIK3C2A	O00443	1686 aa		13.79	□□□□□ -0.2
TCP11-208	ENST00000427376	IL2RB	P14784	551 aa		13.79	□□□□□ -0.2
TCP11-208	ENST00000427376	PRIM1	P49642	420 aa	Known RBP	13.79	□□□□□ -0.2
TCP11-208	ENST00000427376	NEUROD2	Q15784	382 aa		13.79	□□□□□ -0.2
TCP11-208	ENST00000427376	ARHGEF25	Q86VW2	580 aa		13.79	□□□□□ -0.2
TCP11-208	ENST00000427376	SP7	Q8TDD2	431 aa	Predicted RBP	13.79	□□□□□ -0.2
TCP11-208	ENST00000427376	GCC1	Q96CN9	775 aa		13.79	□□□□□ -0.2
TCP11-208	ENST00000427376	DLL1	O00548	723 aa		13.78	□□□□□ -0.2
TCP11-208	ENST00000427376	KRI1	Q8N9T8	703 aa	Known RBP	13.78	□□□□□ -0.2
TCP11-208	ENST00000427376	MCOLN1	Q9GZU1	580 aa		13.78	□□□□□ -0.2
TCP11-208	ENST00000427376	TRAK1	Q9UPV9	953 aa		13.78	□□□□□ -0.2
TCP11-208	ENST00000427376	ERBB3	P21860	1342 aa		13.78	□□□□□ -0.2
TCP11-208	ENST00000427376	PKD1L3	Q7Z443	1732 aa		13.78	□□□□□ -0.2
TCP11-208	ENST00000427376	CPSF1	Q10570	1443 aa	Known RBP	13.77	□□□□□ -0.21
TCP11-208	ENST00000427376	SYTL4	Q96C24	671 aa	Predicted RBP	13.77	□□□□□ -0.21
TCP11-208	ENST00000427376	KAT6B	Q8WYB5	2073 aa		13.76	□□□□□ -0.21
TCP11-208	ENST00000427376	SLIT3	O75094	1523 aa		13.76	□□□□□ -0.21
TCP11-208	ENST00000427376	NSD2	O96028	1365 aa		13.76	□□□□□ -0.21
TCP11-208	ENST00000427376	DPEP1	P16444	411 aa		13.76	□□□□□ -0.21
TCP11-208	ENST00000427376	SMIM5	Q71RC9	77 aa		13.76	□□□□□ -0.21
TCP11-208	ENST00000427376	DCAF5	Q96JK2	942 aa		13.76	□□□□□ -0.21
TCP11-208	ENST00000427376	LY75	O60449	1722 aa		13.76	□□□□□ -0.21
TCP11-208	ENST00000427376	ANKRD36B	Q8N2N9	1353 aa		13.75	□□□□□ -0.21
TCP11-208	ENST00000427376	POTEC	B2RU33	542 aa		13.75	□□□□□ -0.21
TCP11-208	ENST00000427376	AK7	Q96M32	723 aa		13.75	□□□□□ -0.21
TCP11-208	ENST00000427376	ITSN1	Q15811	1721 aa		13.74	□□□□□ -0.21
TCP11-208	ENST00000427376	EVI5	O60447	810 aa		13.74	□□□□□ -0.21
TCP11-208	ENST00000427376	AMIGO3	Q86WK7	504 aa		13.74	□□□□□ -0.21
TCP11-208	ENST00000427376	PTCD2	Q8WV60	388 aa	Known RBP	13.74	□□□□□ -0.21
TCP11-208	ENST00000427376	QRICH2	Q9H0J4	1663 aa		13.73	□□□□□ -0.21
TCP11-208	ENST00000427376	ZNF316	A6NFI3	1004 aa	Predicted RBP	13.73	□□□□□ -0.21
TCP11-208	ENST00000427376	KCNA3	P22001	575 aa		13.73	□□□□□ -0.21
TCP11-208	ENST00000427376	HABP4	Q5JVS0	413 aa	Known RBP	13.73	□□□□□ -0.21
TCP11-208	ENST00000427376	DDX54	Q8TDD1	881 aa	Known RBP	13.73	□□□□□ -0.21
TCP11-208	ENST00000427376	DDX12P	Q92771	950 aa		13.73	□□□□□ -0.21
TCP11-208	ENST00000427376	PASK	Q96RG2	1323 aa		13.72	□□□□□ -0.21
TCP11-208	ENST00000427376	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	13.72	□□□□□ -0.21
TCP11-208	ENST00000427376	TMEM88B	A6NKF7	163 aa		13.72	□□□□□ -0.21
TCP11-208	ENST00000427376	MMP10	P09238	476 aa		13.72	□□□□□ -0.21
TCP11-208	ENST00000427376	OSBP	P22059	807 aa		13.72	□□□□□ -0.21
TCP11-208	ENST00000427376	CDK19	Q9BWU1	502 aa		13.72	□□□□□ -0.21
TCP11-208	ENST00000427376	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	13.72	□□□□□ -0.21
TCP11-208	ENST00000427376	GTF3C3	Q9Y5Q9	886 aa		13.72	□□□□□ -0.21
TCP11-208	ENST00000427376	KIAA1551	Q9HCM1	1747 aa		13.72	□□□□□ -0.21
TCP11-208	ENST00000427376	USP47	Q96K76	1375 aa		13.71	□□□□□ -0.21
TCP11-208	ENST00000427376	RASSF10	A6NK89	507 aa		13.71	□□□□□ -0.21
TCP11-208	ENST00000427376	PIM2	Q9P1W9	311 aa		13.71	□□□□□ -0.21
TCP11-208	ENST00000427376	USP54	Q70EL1	1684 aa		13.71	□□□□□ -0.21
TCP11-208	ENST00000427376	VIRMA	Q69YN4	1812 aa	Known RBP	13.71	□□□□□ -0.22
TCP11-208	ENST00000427376	GPR37	O15354	613 aa		13.7	□□□□□ -0.22
TCP11-208	ENST00000427376	NLRP2	Q9NX02	1062 aa		13.7	□□□□□ -0.22
TCP11-208	ENST00000427376	KIF13B	Q9NQT8	1826 aa		13.69	□□□□□ -0.22
TCP11-208	ENST00000427376	WDR33	Q9C0J8	1336 aa	Known RBP	13.69	□□□□□ -0.22
TCP11-208	ENST00000427376	PHF14	O94880	888 aa		13.69	□□□□□ -0.22
TCP11-208	ENST00000427376	SSFA2	P28290	1259 aa		13.69	□□□□□ -0.22
TCP11-208	ENST00000427376	ITGAE	P38570	1179 aa		13.69	□□□□□ -0.22
TCP11-208	ENST00000427376	DEFB115	Q30KQ5	88 aa		13.69	□□□□□ -0.22
TCP11-208	ENST00000427376	DALRD3	Q5D0E6	543 aa	Known RBP	13.69	□□□□□ -0.22
TCP11-208	ENST00000427376	KCNH5	Q8NCM2	988 aa		13.69	□□□□□ -0.22
TCP11-208	ENST00000427376	KDM6A	O15550	1401 aa	Predicted RBP	13.69	□□□□□ -0.22
TCP11-208	ENST00000427376	N4BP2	Q86UW6	1770 aa	Predicted RBP	13.68	□□□□□ -0.22
TCP11-208	ENST00000427376	NSD3	Q9BZ95	1437 aa		13.68	□□□□□ -0.22
TCP11-208	ENST00000427376	BEGAIN	Q9BUH8	593 aa		13.68	□□□□□ -0.22
TCP11-208	ENST00000427376	LMNB1	P20700	586 aa		13.67	□□□□□ -0.22
TCP11-208	ENST00000427376	ADGRB1	O14514	1584 aa		13.66	□□□□□ -0.22
TCP11-208	ENST00000427376	SOX10	P56693	466 aa		13.66	□□□□□ -0.22
TCP11-208	ENST00000427376	DGKZ	Q13574	1117 aa		13.66	□□□□□ -0.22
TCP11-208	ENST00000427376	CCDC87	Q9NVE4	849 aa		13.66	□□□□□ -0.22
TCP11-208	ENST00000427376	POTEJ	P0CG39	1038 aa		13.65	□□□□□ -0.22
TCP11-208	ENST00000427376	ARFGEF1	Q9Y6D6	1849 aa		13.64	□□□□□ -0.23
TCP11-208	ENST00000427376	C5	P01031	1676 aa		13.63	□□□□□ -0.23
TCP11-208	ENST00000427376	RAB3GAP2	Q9H2M9	1393 aa		13.63	□□□□□ -0.23
TCP11-208	ENST00000427376	TRIM66	O15016	1216 aa		13.63	□□□□□ -0.23
TCP11-208	ENST00000427376	ITGBL1	O95965	494 aa	Predicted RBP	13.63	□□□□□ -0.23
TCP11-208	ENST00000427376	FXR1	P51114	621 aa	Known RBP eCLIP	13.63	□□□□□ -0.23
TCP11-208	ENST00000427376	RASSF7	Q02833	373 aa		13.63	□□□□□ -0.23
TCP11-208	ENST00000427376	SBF1	O95248	1867 aa		13.63	□□□□□ -0.23
TCP11-208	ENST00000427376	RGPD5	Q99666	1765 aa		13.63	□□□□□ -0.23
TCP11-208	ENST00000427376	BRCA1	P38398	1863 aa	Known RBP	13.62	□□□□□ -0.23
TCP11-208	ENST00000427376	NBPF15	Q8N660	670 aa		13.62	□□□□□ -0.23
TCP11-208	ENST00000427376	PITPNM2	Q9BZ72	1349 aa		13.62	□□□□□ -0.23
TCP11-208	ENST00000427376	NLGN1	Q8N2Q7	840 aa		13.61	□□□□□ -0.23
TCP11-208	ENST00000427376	TSKS	Q9UJT2	592 aa		13.61	□□□□□ -0.23
TCP11-208	ENST00000427376	PALLD	Q8WX93	1383 aa		13.6	□□□□□ -0.23
TCP11-208	ENST00000427376	GNPAT	O15228	680 aa		13.6	□□□□□ -0.23
TCP11-208	ENST00000427376	ZEB1	P37275	1124 aa	Predicted RBP	13.6	□□□□□ -0.23
TCP11-208	ENST00000427376	HIC1	Q14526	733 aa		13.6	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms