RNA–Protein interactions for RNA: ENST00000427099.1

TRO-209, Transcript of trophinin, humanhuman

TSL 3

Gene TRO, Length 562 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-209ENST00000427099 KIF13BQ9NQT8 1826 aa18.84■□□□□ 0.61
TRO-209ENST00000427099 FCHSD2O94868 740 aa18.83■□□□□ 0.6
TRO-209ENST00000427099 TM4SF1P30408 202 aa18.83■□□□□ 0.6
TRO-209ENST00000427099 ZNF496Q96IT1 587 aaPredicted RBP18.83■□□□□ 0.6
TRO-209ENST00000427099 NARFQ9UHQ1 456 aa18.83■□□□□ 0.6
TRO-209ENST00000427099 ATP10DQ9P241 1426 aa18.83■□□□□ 0.6
TRO-209ENST00000427099 COL15A1P39059 1388 aa18.82■□□□□ 0.6
TRO-209ENST00000427099 BTBD11A6QL63 1104 aa18.82■□□□□ 0.6
TRO-209ENST00000427099 ZNF526Q8TF50 670 aaPredicted RBP18.82■□□□□ 0.6
TRO-209ENST00000427099 RTF1Q92541 710 aaKnown RBP18.82■□□□□ 0.6
TRO-209ENST00000427099 POLRMTO00411 1230 aaKnown RBP18.81■□□□□ 0.6
TRO-209ENST00000427099 ARHGAP27Q6ZUM4 889 aa18.81■□□□□ 0.6
TRO-209ENST00000427099 FMNL2Q96PY5 1086 aa18.81■□□□□ 0.6
TRO-209ENST00000427099 TEX13AQ9BXU3 409 aaPredicted RBP18.81■□□□□ 0.6
TRO-209ENST00000427099 HEG1Q9ULI3 1381 aa18.81■□□□□ 0.6
TRO-209ENST00000427099 KIAA1551Q9HCM1 1747 aa18.8■□□□□ 0.6
TRO-209ENST00000427099 KCNQ3O43525 872 aa18.8■□□□□ 0.6
TRO-209ENST00000427099 GPBP1L1Q9HC44 474 aaPredicted RBP18.8■□□□□ 0.6
TRO-209ENST00000427099 ZNF330Q9Y3S2 320 aaPredicted RBP18.8■□□□□ 0.6
TRO-209ENST00000427099 UBR2Q8IWV8 1755 aa18.8■□□□□ 0.6
TRO-209ENST00000427099 SENP3-EIF4A1A0A087X0R7 540 aa18.79■□□□□ 0.6
TRO-209ENST00000427099 KCNA3P22001 575 aa18.79■□□□□ 0.6
TRO-209ENST00000427099 NFIXQ14938 502 aa18.79■□□□□ 0.6
TRO-209ENST00000427099 MCM10Q7L590 875 aa18.79■□□□□ 0.6
TRO-209ENST00000427099 PIM2Q9P1W9 311 aa18.79■□□□□ 0.6
TRO-209ENST00000427099 CEMIPQ8WUJ3 1361 aa18.79■□□□□ 0.6
TRO-209ENST00000427099 A0A087WZG4 1122 aa18.78■□□□□ 0.6
TRO-209ENST00000427099 EIF5P55010 431 aaKnown RBP18.78■□□□□ 0.6
TRO-209ENST00000427099 BICDL1Q6ZP65 573 aa18.78■□□□□ 0.6
TRO-209ENST00000427099 BCL2L12Q9HB09 334 aa18.78■□□□□ 0.6
TRO-209ENST00000427099 SIPA1L3O60292 1781 aaPredicted RBP18.78■□□□□ 0.6
TRO-209ENST00000427099 CHRNA5P30532 468 aa18.77■□□□□ 0.6
TRO-209ENST00000427099 DCTN1Q14203 1278 aa18.77■□□□□ 0.6
TRO-209ENST00000427099 A1BGP04217 495 aa18.76■□□□□ 0.59
TRO-209ENST00000427099 SERPINB2P05120 415 aa18.76■□□□□ 0.59
TRO-209ENST00000427099 NEFMP07197 916 aa18.76■□□□□ 0.59
TRO-209ENST00000427099 DALRD3Q5D0E6 543 aaKnown RBP18.76■□□□□ 0.59
TRO-209ENST00000427099 NPM2Q86SE8 214 aaKnown RBP18.76■□□□□ 0.59
TRO-209ENST00000427099 TBC1D2BQ9UPU7 963 aa18.75■□□□□ 0.59
TRO-209ENST00000427099 ADCY9O60503 1353 aa18.75■□□□□ 0.59
TRO-209ENST00000427099 HTATSF1O43719 755 aaKnown RBP18.73■□□□□ 0.59
TRO-209ENST00000427099 IL6STP40189 918 aaPredicted RBP18.73■□□□□ 0.59
TRO-209ENST00000427099 USP16Q9Y5T5 823 aa18.73■□□□□ 0.59
TRO-209ENST00000427099 PRAMEF22A3QJZ6 481 aa18.72■□□□□ 0.59
TRO-209ENST00000427099 TBC1D9BQ66K14 1250 aa18.72■□□□□ 0.59
TRO-209ENST00000427099 AFDNP55196 1824 aaKnown RBP18.72■□□□□ 0.59
TRO-209ENST00000427099 BRCA1P38398 1863 aaKnown RBP18.71■□□□□ 0.59
TRO-209ENST00000427099 PIP4K2AP48426 406 aaPredicted RBP18.71■□□□□ 0.59
TRO-209ENST00000427099 SNRPA1P09661 255 aaKnown RBP18.7■□□□□ 0.58
TRO-209ENST00000427099 TAF7Q15545 349 aaPredicted RBP18.7■□□□□ 0.58
TRO-209ENST00000427099 MIS18AQ9NYP9 233 aa18.7■□□□□ 0.58
TRO-209ENST00000427099 C9orf131Q5VYM1 1079 aa18.69■□□□□ 0.58
TRO-209ENST00000427099 DZIP3Q86Y13 1208 aaKnown RBP18.69■□□□□ 0.58
TRO-209ENST00000427099 C2CD5Q86YS7 1000 aa18.69■□□□□ 0.58
TRO-209ENST00000427099 ARFGEF1Q9Y6D6 1849 aa18.68■□□□□ 0.58
TRO-209ENST00000427099 DDX10Q13206 875 aaKnown RBP18.68■□□□□ 0.58
TRO-209ENST00000427099 CCDC24Q8N4L8 307 aa18.68■□□□□ 0.58
TRO-209ENST00000427099 PNNQ9H307 717 aaKnown RBP18.68■□□□□ 0.58
TRO-209ENST00000427099 NRXN2Q9P2S2 1712 aa18.67■□□□□ 0.58
TRO-209ENST00000427099 H0YIN7 160 aa18.67■□□□□ 0.58
TRO-209ENST00000427099 NPHP1O15259 732 aa18.67■□□□□ 0.58
TRO-209ENST00000427099 CAMTA2O94983 1202 aa18.67■□□□□ 0.58
TRO-209ENST00000427099 PLEKHF1Q96S99 279 aa18.67■□□□□ 0.58
TRO-209ENST00000427099 SETDB2Q96T68 719 aa18.67■□□□□ 0.58
TRO-209ENST00000427099 MAPK8IP3Q9UPT6 1336 aa18.67■□□□□ 0.58
TRO-209ENST00000427099 RALBP1Q15311 655 aa18.66■□□□□ 0.58
TRO-209ENST00000427099 NFE2L2Q16236 605 aa18.66■□□□□ 0.58
TRO-209ENST00000427099 TTLL6Q8N841 843 aa18.66■□□□□ 0.58
TRO-209ENST00000427099 RNF181Q9P0P0 153 aa18.66■□□□□ 0.58
TRO-209ENST00000427099 CARMIL3Q8ND23 1372 aa18.66■□□□□ 0.58
TRO-209ENST00000427099 ZNF622Q969S3 477 aaKnown RBP eCLIP18.65■□□□□ 0.58
TRO-209ENST00000427099 KIF3CO14782 793 aa18.64■□□□□ 0.57
TRO-209ENST00000427099 PRR5LQ6MZQ0 368 aa18.64■□□□□ 0.57
TRO-209ENST00000427099 PNISRQ8TF01 805 aaKnown RBP18.64■□□□□ 0.57
TRO-209ENST00000427099 THUMPD2Q9BTF0 503 aaKnown RBP18.64■□□□□ 0.57
TRO-209ENST00000427099 DLG5Q8TDM6 1919 aa18.64■□□□□ 0.57
TRO-209ENST00000427099 SCN7AQ01118 1682 aa18.63■□□□□ 0.57
TRO-209ENST00000427099 PDE6BP35913 854 aa18.63■□□□□ 0.57
TRO-209ENST00000427099 BRIP1Q9BX63 1249 aa18.63■□□□□ 0.57
TRO-209ENST00000427099 NBPF26B4DH59 902 aa18.62■□□□□ 0.57
TRO-209ENST00000427099 RASSF7Q02833 373 aa18.62■□□□□ 0.57
TRO-209ENST00000427099 NBPF10Q6P3W6 841 aaKnown RBP18.62■□□□□ 0.57
TRO-209ENST00000427099 NBPF15Q8N660 670 aa18.62■□□□□ 0.57
TRO-209ENST00000427099 CNBD1Q8NA66 436 aa18.62■□□□□ 0.57
TRO-209ENST00000427099 ST5P78524 1137 aa18.61■□□□□ 0.57
TRO-209ENST00000427099 NGEFQ8N5V2 710 aa18.61■□□□□ 0.57
TRO-209ENST00000427099 NMRK2Q9NPI5 230 aa18.61■□□□□ 0.57
TRO-209ENST00000427099 ZNF219Q9P2Y4 722 aaPredicted RBP18.61■□□□□ 0.57
TRO-209ENST00000427099 PDZRN3Q9UPQ7 1066 aa18.61■□□□□ 0.57
TRO-209ENST00000427099 ZNF652Q9Y2D9 606 aa18.61■□□□□ 0.57
TRO-209ENST00000427099 CLEC4GQ6UXB4 293 aa18.6■□□□□ 0.57
TRO-209ENST00000427099 RIPK4P57078 832 aa18.59■□□□□ 0.57
TRO-209ENST00000427099 EIF4A1P60842 406 aaKnown RBP18.59■□□□□ 0.57
TRO-209ENST00000427099 NBPF5PQ86XG9 351 aaPredicted RBP18.59■□□□□ 0.57
TRO-209ENST00000427099 RRP7AQ9Y3A4 280 aaKnown RBP18.59■□□□□ 0.57
TRO-209ENST00000427099 ANKRD31Q8N7Z5 1873 aa18.58■□□□□ 0.57
TRO-209ENST00000427099 DLEC1Q9Y238 1755 aa18.58■□□□□ 0.57
TRO-209ENST00000427099 FAM177BA6PVY3 158 aa18.58■□□□□ 0.56
TRO-209ENST00000427099 HSPA6P17066 643 aa18.58■□□□□ 0.56
TRO-209ENST00000427099 NIP7Q9Y221 180 aaKnown RBP eCLIP18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms