RNA–Protein interactions for RNA: ENST00000426583.1

BRPF1-204, Transcript of bromodomain and PHD finger containing 1, humanhuman

TSL 4

Gene BRPF1, Length 534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1-204ENST00000426583 PHACTR3Q96KR7 559 aa13.2□□□□□ -0.3
BRPF1-204ENST00000426583 NARFQ9UHQ1 456 aa13.2□□□□□ -0.3
BRPF1-204ENST00000426583 ARFGEF1Q9Y6D6 1849 aa13.2□□□□□ -0.3
BRPF1-204ENST00000426583 COL15A1P39059 1388 aa13.2□□□□□ -0.3
BRPF1-204ENST00000426583 HEG1Q9ULI3 1381 aa13.2□□□□□ -0.3
BRPF1-204ENST00000426583 CEP350Q5VT06 3117 aa13.19□□□□□ -0.3
BRPF1-204ENST00000426583 HTATSF1O43719 755 aaKnown RBP13.19□□□□□ -0.3
BRPF1-204ENST00000426583 ZPR1O75312 459 aa13.19□□□□□ -0.3
BRPF1-204ENST00000426583 STARD3NLO95772 234 aa13.19□□□□□ -0.3
BRPF1-204ENST00000426583 FKBP8Q14318 412 aa13.19□□□□□ -0.3
BRPF1-204ENST00000426583 SRP68Q9UHB9 627 aaKnown RBP13.19□□□□□ -0.3
BRPF1-204ENST00000426583 POLRMTO00411 1230 aaKnown RBP13.18□□□□□ -0.3
BRPF1-204ENST00000426583 EIF5P55010 431 aaKnown RBP13.18□□□□□ -0.3
BRPF1-204ENST00000426583 ZNF496Q96IT1 587 aaPredicted RBP13.18□□□□□ -0.3
BRPF1-204ENST00000426583 ZBTB1Q9Y2K1 713 aa13.18□□□□□ -0.3
BRPF1-204ENST00000426583 A0A087WZG4 1122 aa13.17□□□□□ -0.3
BRPF1-204ENST00000426583 U2AF1L5P0DN76 240 aaPredicted RBP13.17□□□□□ -0.3
BRPF1-204ENST00000426583 KCNA3P22001 575 aa13.17□□□□□ -0.3
BRPF1-204ENST00000426583 C1QTNF8P60827 252 aa13.17□□□□□ -0.3
BRPF1-204ENST00000426583 U2AF1Q01081 240 aaKnown RBP eCLIP13.17□□□□□ -0.3
BRPF1-204ENST00000426583 DDR1Q08345 913 aa13.17□□□□□ -0.3
BRPF1-204ENST00000426583 FMNL2Q96PY5 1086 aa13.17□□□□□ -0.3
BRPF1-204ENST00000426583 AFDNP55196 1824 aaKnown RBP13.16□□□□□ -0.3
BRPF1-204ENST00000426583 ATP10DQ9P241 1426 aa13.16□□□□□ -0.3
BRPF1-204ENST00000426583 SCN7AQ01118 1682 aa13.16□□□□□ -0.3
BRPF1-204ENST00000426583 A0A0G2JLW4 131 aa13.16□□□□□ -0.3
BRPF1-204ENST00000426583 CNGB1Q14028 1251 aaPredicted RBP13.16□□□□□ -0.3
BRPF1-204ENST00000426583 USPL1Q5W0Q7 1092 aa13.16□□□□□ -0.3
BRPF1-204ENST00000426583 GIGYF1O75420 1035 aaPredicted RBP13.15□□□□□ -0.3
BRPF1-204ENST00000426583 DPEP1P16444 411 aa13.15□□□□□ -0.3
BRPF1-204ENST00000426583 IL6STP40189 918 aaPredicted RBP13.15□□□□□ -0.3
BRPF1-204ENST00000426583 RTF1Q92541 710 aaKnown RBP13.15□□□□□ -0.3
BRPF1-204ENST00000426583 BCL2L12Q9HB09 334 aa13.15□□□□□ -0.3
BRPF1-204ENST00000426583 FOXD4L1Q9NU39 408 aa13.15□□□□□ -0.3
BRPF1-204ENST00000426583 DLEC1Q9Y238 1755 aa13.15□□□□□ -0.31
BRPF1-204ENST00000426583 BTBD11A6QL63 1104 aa13.14□□□□□ -0.31
BRPF1-204ENST00000426583 NFIXQ14938 502 aa13.14□□□□□ -0.31
BRPF1-204ENST00000426583 PIM2Q9P1W9 311 aa13.14□□□□□ -0.31
BRPF1-204ENST00000426583 RGL2O15211 777 aa13.13□□□□□ -0.31
BRPF1-204ENST00000426583 BCS1LQ9Y276 419 aa13.13□□□□□ -0.31
BRPF1-204ENST00000426583 BCORQ6W2J9 1755 aa13.12□□□□□ -0.31
BRPF1-204ENST00000426583 DLG5Q8TDM6 1919 aa13.12□□□□□ -0.31
BRPF1-204ENST00000426583 CANXP27824 592 aaKnown RBP13.12□□□□□ -0.31
BRPF1-204ENST00000426583 PLEKHF1Q96S99 279 aa13.12□□□□□ -0.31
BRPF1-204ENST00000426583 PNNQ9H307 717 aaKnown RBP13.12□□□□□ -0.31
BRPF1-204ENST00000426583 WWC3Q9ULE0 1092 aa13.12□□□□□ -0.31
BRPF1-204ENST00000426583 RALBP1Q15311 655 aa13.11□□□□□ -0.31
BRPF1-204ENST00000426583 DALRD3Q5D0E6 543 aaKnown RBP13.11□□□□□ -0.31
BRPF1-204ENST00000426583 GPBP1L1Q9HC44 474 aaPredicted RBP13.11□□□□□ -0.31
BRPF1-204ENST00000426583 PDZRN3Q9UPQ7 1066 aa13.11□□□□□ -0.31
BRPF1-204ENST00000426583 SERPINB2P05120 415 aa13.1□□□□□ -0.31
BRPF1-204ENST00000426583 NEFMP07197 916 aa13.1□□□□□ -0.31
BRPF1-204ENST00000426583 SNRPA1P09661 255 aaKnown RBP13.1□□□□□ -0.31
BRPF1-204ENST00000426583 TAF7Q15545 349 aaPredicted RBP13.1□□□□□ -0.31
BRPF1-204ENST00000426583 MCM10Q7L590 875 aa13.1□□□□□ -0.31
BRPF1-204ENST00000426583 KDM3BQ7LBC6 1761 aa13.09□□□□□ -0.31
BRPF1-204ENST00000426583 CARMIL3Q8ND23 1372 aa13.09□□□□□ -0.31
BRPF1-204ENST00000426583 KCNQ3O43525 872 aa13.09□□□□□ -0.31
BRPF1-204ENST00000426583 SBF1O95248 1867 aa13.09□□□□□ -0.31
BRPF1-204ENST00000426583 CLEC4GQ6UXB4 293 aa13.09□□□□□ -0.31
BRPF1-204ENST00000426583 PNISRQ8TF01 805 aaKnown RBP13.09□□□□□ -0.31
BRPF1-204ENST00000426583 LAMB4A4D0S4 1761 aa13.09□□□□□ -0.31
BRPF1-204ENST00000426583 CAMTA2O94983 1202 aa13.08□□□□□ -0.32
BRPF1-204ENST00000426583 A1BGP04217 495 aa13.08□□□□□ -0.32
BRPF1-204ENST00000426583 NFE2L2Q16236 605 aa13.08□□□□□ -0.32
BRPF1-204ENST00000426583 ARHGAP27Q6ZUM4 889 aa13.08□□□□□ -0.32
BRPF1-204ENST00000426583 USP16Q9Y5T5 823 aa13.08□□□□□ -0.32
BRPF1-204ENST00000426583 ANKRD31Q8N7Z5 1873 aa13.08□□□□□ -0.32
BRPF1-204ENST00000426583 SENP3-EIF4A1A0A087X0R7 540 aa13.07□□□□□ -0.32
BRPF1-204ENST00000426583 CHRNA5P30532 468 aa13.07□□□□□ -0.32
BRPF1-204ENST00000426583 TBC1D9BQ66K14 1250 aa13.07□□□□□ -0.32
BRPF1-204ENST00000426583 NPM2Q86SE8 214 aaKnown RBP13.07□□□□□ -0.32
BRPF1-204ENST00000426583 BRIP1Q9BX63 1249 aa13.07□□□□□ -0.32
BRPF1-204ENST00000426583 ZC3H4Q9UPT8 1303 aaKnown RBP13.07□□□□□ -0.32
BRPF1-204ENST00000426583 DCTN1Q14203 1278 aa13.06□□□□□ -0.32
BRPF1-204ENST00000426583 TBC1D2BQ9UPU7 963 aa13.06□□□□□ -0.32
BRPF1-204ENST00000426583 H0YIN7 160 aa13.05□□□□□ -0.32
BRPF1-204ENST00000426583 KIF3CO14782 793 aa13.05□□□□□ -0.32
BRPF1-204ENST00000426583 PDE6BP35913 854 aa13.05□□□□□ -0.32
BRPF1-204ENST00000426583 DZIP3Q86Y13 1208 aaKnown RBP13.05□□□□□ -0.32
BRPF1-204ENST00000426583 TTLL6Q8N841 843 aa13.05□□□□□ -0.32
BRPF1-204ENST00000426583 SETDB2Q96T68 719 aa13.05□□□□□ -0.32
BRPF1-204ENST00000426583 BABAM1Q9NWV8 329 aa13.05□□□□□ -0.32
BRPF1-204ENST00000426583 ARFGEF2Q9Y6D5 1785 aa13.04□□□□□ -0.32
BRPF1-204ENST00000426583 PRAMEF22A3QJZ6 481 aa13.04□□□□□ -0.32
BRPF1-204ENST00000426583 C9orf131Q5VYM1 1079 aa13.04□□□□□ -0.32
BRPF1-204ENST00000426583 PRR5LQ6MZQ0 368 aa13.04□□□□□ -0.32
BRPF1-204ENST00000426583 RTN4Q9NQC3 1192 aaKnown RBP13.04□□□□□ -0.32
BRPF1-204ENST00000426583 ZNF652Q9Y2D9 606 aa13.04□□□□□ -0.32
BRPF1-204ENST00000426583 MYBBP1AQ9BQG0 1328 aaKnown RBP13.04□□□□□ -0.32
BRPF1-204ENST00000426583 MAPK8IP3Q9UPT6 1336 aa13.04□□□□□ -0.32
BRPF1-204ENST00000426583 COL11A2P13942 1736 aaPredicted RBP13.03□□□□□ -0.32
BRPF1-204ENST00000426583 NBPF26B4DH59 902 aa13.03□□□□□ -0.32
BRPF1-204ENST00000426583 NBPF10Q6P3W6 841 aaKnown RBP13.03□□□□□ -0.32
BRPF1-204ENST00000426583 C2CD5Q86YS7 1000 aa13.03□□□□□ -0.32
BRPF1-204ENST00000426583 NBPF15Q8N660 670 aa13.03□□□□□ -0.32
BRPF1-204ENST00000426583 KLRG2A4D1S0 409 aaPredicted RBP13.02□□□□□ -0.33
BRPF1-204ENST00000426583 EIF4A1P60842 406 aaKnown RBP13.02□□□□□ -0.33
BRPF1-204ENST00000426583 BICDL1Q6ZP65 573 aa13.02□□□□□ -0.33
BRPF1-204ENST00000426583 CNBD1Q8NA66 436 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms