RNA–Protein interactions for RNA: ENST00000426304.5

NHEJ1-204, Transcript of non-homologous end joining factor 1, human

TSL 3

Gene NHEJ1, Length 753 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NHEJ1-204	ENST00000426304	KIAA1551	Q9HCM1	1747 aa		10.92	□□□□□ -0.66
NHEJ1-204	ENST00000426304	KIF3C	O14782	793 aa		10.91	□□□□□ -0.66
NHEJ1-204	ENST00000426304	APLP1	P51693	650 aa		10.91	□□□□□ -0.66
NHEJ1-204	ENST00000426304	TGFB2	P61812	414 aa		10.91	□□□□□ -0.66
NHEJ1-204	ENST00000426304	CHADL	Q6NUI6	762 aa		10.91	□□□□□ -0.66
NHEJ1-204	ENST00000426304	AMIGO3	Q86WK7	504 aa		10.91	□□□□□ -0.66
NHEJ1-204	ENST00000426304	LINC00116	Q8NCU8	138 aa		10.91	□□□□□ -0.66
NHEJ1-204	ENST00000426304	PXDNL	A1KZ92	1463 aa		10.91	□□□□□ -0.66
NHEJ1-204	ENST00000426304	C10orf71	Q711Q0	1435 aa		10.91	□□□□□ -0.66
NHEJ1-204	ENST00000426304	WASHC2A	Q641Q2	1341 aa		10.9	□□□□□ -0.66
NHEJ1-204	ENST00000426304	GNPAT	O15228	680 aa		10.9	□□□□□ -0.66
NHEJ1-204	ENST00000426304	IFNL2	Q8IZJ0	200 aa		10.9	□□□□□ -0.66
NHEJ1-204	ENST00000426304	ZNF526	Q8TF50	670 aa	Predicted RBP	10.9	□□□□□ -0.66
NHEJ1-204	ENST00000426304	LARP6	Q9BRS8	491 aa	Known RBP	10.9	□□□□□ -0.66
NHEJ1-204	ENST00000426304	FARP1	Q9Y4F1	1045 aa	Predicted RBP	10.9	□□□□□ -0.66
NHEJ1-204	ENST00000426304	KDR	P35968	1356 aa		10.9	□□□□□ -0.67
NHEJ1-204	ENST00000426304	NLGN1	Q8N2Q7	840 aa		10.89	□□□□□ -0.67
NHEJ1-204	ENST00000426304	ARIH1	Q9Y4X5	557 aa	Predicted RBP	10.89	□□□□□ -0.67
NHEJ1-204	ENST00000426304	EMILIN1	Q9Y6C2	1016 aa		10.89	□□□□□ -0.67
NHEJ1-204	ENST00000426304	C4A	P0C0L4	1744 aa		10.89	□□□□□ -0.67
NHEJ1-204	ENST00000426304	COL5A3	P25940	1745 aa	Predicted RBP	10.89	□□□□□ -0.67
NHEJ1-204	ENST00000426304	BRCA1	P38398	1863 aa	Known RBP	10.89	□□□□□ -0.67
NHEJ1-204	ENST00000426304	TOMM70	O94826	608 aa		10.88	□□□□□ -0.67
NHEJ1-204	ENST00000426304	MMP10	P09238	476 aa		10.88	□□□□□ -0.67
NHEJ1-204	ENST00000426304	PHKG2	P15735	406 aa		10.88	□□□□□ -0.67
NHEJ1-204	ENST00000426304	ATP6V1A	P38606	617 aa		10.88	□□□□□ -0.67
NHEJ1-204	ENST00000426304	MFSD10	Q14728	455 aa		10.88	□□□□□ -0.67
NHEJ1-204	ENST00000426304	ARFGEF1	Q9Y6D6	1849 aa		10.88	□□□□□ -0.67
NHEJ1-204	ENST00000426304	CNTNAP4	Q9C0A0	1308 aa		10.87	□□□□□ -0.67
NHEJ1-204	ENST00000426304	HSP90AB1	P08238	724 aa	Known RBP	10.87	□□□□□ -0.67
NHEJ1-204	ENST00000426304	PDE4A	P27815	886 aa		10.87	□□□□□ -0.67
NHEJ1-204	ENST00000426304	ITPK1	Q13572	414 aa		10.87	□□□□□ -0.67
NHEJ1-204	ENST00000426304	RC3H1	Q5TC82	1133 aa	Known RBP	10.87	□□□□□ -0.67
NHEJ1-204	ENST00000426304	EYA1	Q99502	592 aa		10.87	□□□□□ -0.67
NHEJ1-204	ENST00000426304	CCDC87	Q9NVE4	849 aa		10.87	□□□□□ -0.67
NHEJ1-204	ENST00000426304	RTCB	Q9Y3I0	505 aa	Known RBP	10.87	□□□□□ -0.67
NHEJ1-204	ENST00000426304	N4BP2	Q86UW6	1770 aa	Predicted RBP	10.87	□□□□□ -0.67
NHEJ1-204	ENST00000426304	ERVV-2	B6SEH9	535 aa		10.86	□□□□□ -0.67
NHEJ1-204	ENST00000426304	TRAPPC3L	Q5T215	181 aa		10.86	□□□□□ -0.67
NHEJ1-204	ENST00000426304	IFNL1	Q8IU54	200 aa		10.86	□□□□□ -0.67
NHEJ1-204	ENST00000426304	ATG3	Q9NT62	314 aa		10.86	□□□□□ -0.67
NHEJ1-204	ENST00000426304	ASAP1	Q9ULH1	1129 aa		10.86	□□□□□ -0.67
NHEJ1-204	ENST00000426304	WDR90	Q96KV7	1748 aa		10.86	□□□□□ -0.67
NHEJ1-204	ENST00000426304	RBM46	Q8TBY0	533 aa	Known RBP	10.85	□□□□□ -0.67
NHEJ1-204	ENST00000426304	CARD14	Q9BXL6	1004 aa		10.85	□□□□□ -0.67
NHEJ1-204	ENST00000426304	PPM1G	O15355	546 aa	Predicted RBP	10.84	□□□□□ -0.67
NHEJ1-204	ENST00000426304	DCAF5	Q96JK2	942 aa		10.84	□□□□□ -0.67
NHEJ1-204	ENST00000426304	CRISPLD2	Q9H0B8	497 aa		10.84	□□□□□ -0.67
NHEJ1-204	ENST00000426304	WWC3	Q9ULE0	1092 aa		10.84	□□□□□ -0.67
NHEJ1-204	ENST00000426304	BCS1L	Q9Y276	419 aa		10.84	□□□□□ -0.67
NHEJ1-204	ENST00000426304	TNRC6C	Q9HCJ0	1690 aa	Known RBP	10.83	□□□□□ -0.68
NHEJ1-204	ENST00000426304	RPS6KA4	O75676	772 aa		10.83	□□□□□ -0.68
NHEJ1-204	ENST00000426304	GYS1	P13807	737 aa		10.83	□□□□□ -0.68
NHEJ1-204	ENST00000426304	RFC4	P35249	363 aa		10.83	□□□□□ -0.68
NHEJ1-204	ENST00000426304	FSTL1	Q12841	308 aa		10.83	□□□□□ -0.68
NHEJ1-204	ENST00000426304	SMIM5	Q71RC9	77 aa		10.83	□□□□□ -0.68
NHEJ1-204	ENST00000426304	POLK	Q9UBT6	870 aa		10.83	□□□□□ -0.68
NHEJ1-204	ENST00000426304	PARP3	Q9Y6F1	533 aa		10.83	□□□□□ -0.68
NHEJ1-204	ENST00000426304	FCHSD2	O94868	740 aa		10.82	□□□□□ -0.68
NHEJ1-204	ENST00000426304	EIF4A2	Q14240	407 aa	Known RBP	10.82	□□□□□ -0.68
NHEJ1-204	ENST00000426304	AMOT	Q4VCS5	1084 aa		10.82	□□□□□ -0.68
NHEJ1-204	ENST00000426304	ARHGAP27	Q6ZUM4	889 aa		10.82	□□□□□ -0.68
NHEJ1-204	ENST00000426304	DNAJC5G	Q8N7S2	189 aa		10.82	□□□□□ -0.68
NHEJ1-204	ENST00000426304	DDX27	Q96GQ7	796 aa	Known RBP	10.82	□□□□□ -0.68
NHEJ1-204	ENST00000426304	KDM2B	Q8NHM5	1336 aa		10.82	□□□□□ -0.68
NHEJ1-204	ENST00000426304	ZC3H4	Q9UPT8	1303 aa	Known RBP	10.82	□□□□□ -0.68
NHEJ1-204	ENST00000426304		A0A0G2JLW4	131 aa		10.81	□□□□□ -0.68
NHEJ1-204	ENST00000426304	DPEP1	P16444	411 aa		10.81	□□□□□ -0.68
NHEJ1-204	ENST00000426304	CAMK2B	Q13554	666 aa		10.81	□□□□□ -0.68
NHEJ1-204	ENST00000426304	PLEKHO1	Q53GL0	409 aa	Predicted RBP	10.81	□□□□□ -0.68
NHEJ1-204	ENST00000426304	C16orf71	Q8IYS4	520 aa	Predicted RBP	10.81	□□□□□ -0.68
NHEJ1-204	ENST00000426304	KDM6A	O15550	1401 aa	Predicted RBP	10.81	□□□□□ -0.68
NHEJ1-204	ENST00000426304	MYH14	Q7Z406	1995 aa	Known RBP	10.81	□□□□□ -0.68
NHEJ1-204	ENST00000426304	SLC4A9	Q96Q91	983 aa		10.8	□□□□□ -0.68
NHEJ1-204	ENST00000426304	NMRK2	Q9NPI5	230 aa		10.8	□□□□□ -0.68
NHEJ1-204	ENST00000426304	PIM2	Q9P1W9	311 aa		10.8	□□□□□ -0.68
NHEJ1-204	ENST00000426304	TJP1	Q07157	1748 aa		10.79	□□□□□ -0.68
NHEJ1-204	ENST00000426304	MAP3K13	O43283	966 aa		10.79	□□□□□ -0.68
NHEJ1-204	ENST00000426304	TRIM26	Q12899	539 aa	Predicted RBP	10.79	□□□□□ -0.68
NHEJ1-204	ENST00000426304	DALRD3	Q5D0E6	543 aa	Known RBP	10.79	□□□□□ -0.68
NHEJ1-204	ENST00000426304	C9orf131	Q5VYM1	1079 aa		10.79	□□□□□ -0.68
NHEJ1-204	ENST00000426304	GPIHBP1	Q8IV16	184 aa		10.79	□□□□□ -0.68
NHEJ1-204	ENST00000426304	JMY	Q8N9B5	988 aa		10.79	□□□□□ -0.68
NHEJ1-204	ENST00000426304	KLRG1	Q96E93	195 aa		10.79	□□□□□ -0.68
NHEJ1-204	ENST00000426304	USP42	Q9H9J4	1324 aa	Known RBP	10.79	□□□□□ -0.68
NHEJ1-204	ENST00000426304	KCNA3	P22001	575 aa		10.78	□□□□□ -0.68
NHEJ1-204	ENST00000426304	CABP4	P57796	275 aa		10.78	□□□□□ -0.68
NHEJ1-204	ENST00000426304	RBM26	Q5T8P6	1007 aa	Known RBP	10.78	□□□□□ -0.68
NHEJ1-204	ENST00000426304	ZNF530	Q6P9A1	599 aa	Predicted RBP	10.78	□□□□□ -0.68
NHEJ1-204	ENST00000426304	KRI1	Q8N9T8	703 aa	Known RBP	10.78	□□□□□ -0.68
NHEJ1-204	ENST00000426304	IL27	Q8NEV9	243 aa		10.78	□□□□□ -0.68
NHEJ1-204	ENST00000426304	MS4A4A	Q96JQ5	239 aa		10.78	□□□□□ -0.68
NHEJ1-204	ENST00000426304	ZMYND15	Q9H091	742 aa		10.78	□□□□□ -0.68
NHEJ1-204	ENST00000426304	SBF1	O95248	1867 aa		10.78	□□□□□ -0.68
NHEJ1-204	ENST00000426304	KCP	Q6ZWJ8	1503 aa		10.78	□□□□□ -0.68
NHEJ1-204	ENST00000426304	SCN11A	Q9UI33	1791 aa		10.77	□□□□□ -0.68
NHEJ1-204	ENST00000426304	ADAMTS7	Q9UKP4	1686 aa		10.77	□□□□□ -0.69
NHEJ1-204	ENST00000426304	CRKL	P46109	303 aa	Known RBP	10.77	□□□□□ -0.69
NHEJ1-204	ENST00000426304	C1orf141	Q5JVX7	400 aa		10.77	□□□□□ -0.69
NHEJ1-204	ENST00000426304	KIF12	Q96FN5	646 aa		10.77	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms