RNA–Protein interactions for RNA: ENST00000425537.1

HMGB4-201, Transcript of high mobility group box 4, humanhuman

TSL 1 (best)

Gene HMGB4, Length 630 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-201ENST00000425537 SLC52A2Q9HAB3 445 aa11.86□□□□□ -0.51
HMGB4-201ENST00000425537 DBF4Q9UBU7 674 aaPredicted RBP11.86□□□□□ -0.51
HMGB4-201ENST00000425537 MRC1P22897 1456 aa11.85□□□□□ -0.51
HMGB4-201ENST00000425537 TTC5Q8N0Z6 440 aa11.85□□□□□ -0.51
HMGB4-201ENST00000425537 PDZRN3Q9UPQ7 1066 aa11.85□□□□□ -0.51
HMGB4-201ENST00000425537 N4BP2Q86UW6 1770 aaPredicted RBP11.84□□□□□ -0.51
HMGB4-201ENST00000425537 HYPKQ9NX55 129 aa11.84□□□□□ -0.51
HMGB4-201ENST00000425537 HEG1Q9ULI3 1381 aa11.83□□□□□ -0.52
HMGB4-201ENST00000425537 ERVV-2B6SEH9 535 aa11.83□□□□□ -0.52
HMGB4-201ENST00000425537 EIF5BO60841 1220 aaKnown RBP11.83□□□□□ -0.52
HMGB4-201ENST00000425537 DDX58O95786 925 aaKnown RBP11.83□□□□□ -0.52
HMGB4-201ENST00000425537 CABP4P57796 275 aa11.83□□□□□ -0.52
HMGB4-201ENST00000425537 SLC4A10Q6U841 1118 aa11.83□□□□□ -0.52
HMGB4-201ENST00000425537 GIGYF1O75420 1035 aaPredicted RBP11.82□□□□□ -0.52
HMGB4-201ENST00000425537 EIF2S2P20042 333 aaKnown RBP11.82□□□□□ -0.52
HMGB4-201ENST00000425537 ZNF790Q6PG37 636 aa11.82□□□□□ -0.52
HMGB4-201ENST00000425537 ANKRD44Q8N8A2 993 aa11.82□□□□□ -0.52
HMGB4-201ENST00000425537 FMNL2Q96PY5 1086 aa11.82□□□□□ -0.52
HMGB4-201ENST00000425537 DISP2A7MBM2 1401 aa11.82□□□□□ -0.52
HMGB4-201ENST00000425537 KDM6AO15550 1401 aaPredicted RBP11.82□□□□□ -0.52
HMGB4-201ENST00000425537 CYP27B1O15528 508 aa11.81□□□□□ -0.52
HMGB4-201ENST00000425537 GNAI2P04899 355 aa11.81□□□□□ -0.52
HMGB4-201ENST00000425537 NUCB1Q02818 461 aa11.81□□□□□ -0.52
HMGB4-201ENST00000425537 NKX1-1Q15270 411 aaPredicted RBP11.81□□□□□ -0.52
HMGB4-201ENST00000425537 G2E3Q7L622 706 aa11.81□□□□□ -0.52
HMGB4-201ENST00000425537 CDCA7Q9BWT1 371 aaPredicted RBP11.81□□□□□ -0.52
HMGB4-201ENST00000425537 SHANK3Q9BYB0 1731 aa11.8□□□□□ -0.52
HMGB4-201ENST00000425537 SNRPA1P09661 255 aaKnown RBP11.8□□□□□ -0.52
HMGB4-201ENST00000425537 KRT27Q7Z3Y8 459 aa11.8□□□□□ -0.52
HMGB4-201ENST00000425537 CHD1LQ86WJ1 897 aa11.8□□□□□ -0.52
HMGB4-201ENST00000425537 NFATC2IPQ8NCF5 419 aa11.8□□□□□ -0.52
HMGB4-201ENST00000425537 NECTIN2Q92692 538 aa11.8□□□□□ -0.52
HMGB4-201ENST00000425537 SRCIN1Q9C0H9 1055 aa11.8□□□□□ -0.52
HMGB4-201ENST00000425537 UPF2Q9HAU5 1272 aaKnown RBP11.8□□□□□ -0.52
HMGB4-201ENST00000425537 DDX21Q9NR30 783 aaKnown RBP eCLIP11.8□□□□□ -0.52
HMGB4-201ENST00000425537 ATP10DQ9P241 1426 aa11.79□□□□□ -0.52
HMGB4-201ENST00000425537 BARGINQ6ZT62 677 aa11.79□□□□□ -0.52
HMGB4-201ENST00000425537 DNAAF4Q8WXU2 420 aa11.79□□□□□ -0.52
HMGB4-201ENST00000425537 DDRGK1Q96HY6 314 aa11.79□□□□□ -0.52
HMGB4-201ENST00000425537 CHPF2Q9P2E5 772 aa11.79□□□□□ -0.52
HMGB4-201ENST00000425537 ERBB4Q15303 1308 aa11.79□□□□□ -0.52
HMGB4-201ENST00000425537 F6X3S4 739 aa11.78□□□□□ -0.52
HMGB4-201ENST00000425537 KCNQ3O43525 872 aa11.78□□□□□ -0.52
HMGB4-201ENST00000425537 ALDH1L1O75891 902 aa11.78□□□□□ -0.52
HMGB4-201ENST00000425537 UBTFL1P0CB47 393 aaPredicted RBP11.78□□□□□ -0.52
HMGB4-201ENST00000425537 DDB1Q16531 1140 aa11.78□□□□□ -0.52
HMGB4-201ENST00000425537 ANKRD45Q5TZF3 282 aa11.78□□□□□ -0.52
HMGB4-201ENST00000425537 DDX54Q8TDD1 881 aaKnown RBP11.78□□□□□ -0.52
HMGB4-201ENST00000425537 DCTPP1Q9H773 170 aa11.78□□□□□ -0.52
HMGB4-201ENST00000425537 IBTKQ9P2D0 1353 aaPredicted RBP11.78□□□□□ -0.52
HMGB4-201ENST00000425537 TNS2Q63HR2 1409 aa11.77□□□□□ -0.52
HMGB4-201ENST00000425537 CEP85Q6P2H3 762 aa11.77□□□□□ -0.53
HMGB4-201ENST00000425537 KSR2Q6VAB6 950 aa11.77□□□□□ -0.53
HMGB4-201ENST00000425537 MARCH10Q8NA82 808 aaPredicted RBP11.77□□□□□ -0.53
HMGB4-201ENST00000425537 CNKSR2Q8WXI2 1034 aa11.77□□□□□ -0.53
HMGB4-201ENST00000425537 MEIS3Q99687 375 aa11.77□□□□□ -0.53
HMGB4-201ENST00000425537 C1orf115Q9H7X2 142 aa11.77□□□□□ -0.53
HMGB4-201ENST00000425537 THRAP3Q9Y2W1 955 aaKnown RBP11.77□□□□□ -0.53
HMGB4-201ENST00000425537 ONECUT3O60422 494 aaPredicted RBP11.76□□□□□ -0.53
HMGB4-201ENST00000425537 NEXNQ0ZGT2 675 aa11.76□□□□□ -0.53
HMGB4-201ENST00000425537 C8orf34Q49A92 452 aa11.76□□□□□ -0.53
HMGB4-201ENST00000425537 ACSBG1Q96GR2 724 aa11.76□□□□□ -0.53
HMGB4-201ENST00000425537 TEX13AQ9BXU3 409 aaPredicted RBP11.76□□□□□ -0.53
HMGB4-201ENST00000425537 PHAXQ9H814 394 aaKnown RBP11.76□□□□□ -0.53
HMGB4-201ENST00000425537 LAMB4A4D0S4 1761 aa11.76□□□□□ -0.53
HMGB4-201ENST00000425537 EXOC5O00471 708 aa11.75□□□□□ -0.53
HMGB4-201ENST00000425537 ERICH6Q7L0X2 663 aa11.75□□□□□ -0.53
HMGB4-201ENST00000425537 PTF1AQ7RTS3 328 aa11.75□□□□□ -0.53
HMGB4-201ENST00000425537 DOT1LQ8TEK3 1739 aa11.74□□□□□ -0.53
HMGB4-201ENST00000425537 PI4KAP2A4QPH2 592 aa11.74□□□□□ -0.53
HMGB4-201ENST00000425537 ATP8B2P98198 1209 aa11.74□□□□□ -0.53
HMGB4-201ENST00000425537 SLC39A6Q13433 755 aa11.74□□□□□ -0.53
HMGB4-201ENST00000425537 HSP90AB4PQ58FF6 505 aa11.74□□□□□ -0.53
HMGB4-201ENST00000425537 BEND3Q5T5X7 828 aa11.74□□□□□ -0.53
HMGB4-201ENST00000425537 SKAP1Q86WV1 359 aa11.74□□□□□ -0.53
HMGB4-201ENST00000425537 SIRT2Q8IXJ6 389 aa11.74□□□□□ -0.53
HMGB4-201ENST00000425537 PI4KAP1Q8N8J0 262 aa11.74□□□□□ -0.53
HMGB4-201ENST00000425537 LINS1Q8NG48 757 aa11.74□□□□□ -0.53
HMGB4-201ENST00000425537 ZNF496Q96IT1 587 aaPredicted RBP11.74□□□□□ -0.53
HMGB4-201ENST00000425537 IPO9Q96P70 1041 aaKnown RBP11.74□□□□□ -0.53
HMGB4-201ENST00000425537 LNPKQ9C0E8 428 aa11.74□□□□□ -0.53
HMGB4-201ENST00000425537 TMOD3Q9NYL9 352 aa11.74□□□□□ -0.53
HMGB4-201ENST00000425537 TRIM37O94972 964 aa11.73□□□□□ -0.53
HMGB4-201ENST00000425537 C5P01031 1676 aa11.73□□□□□ -0.53
HMGB4-201ENST00000425537 PAPPAQ13219 1627 aa11.73□□□□□ -0.53
HMGB4-201ENST00000425537 BMP2KLQ5H9B9 411 aa11.73□□□□□ -0.53
HMGB4-201ENST00000425537 RIC3Q7Z5B4 369 aa11.73□□□□□ -0.53
HMGB4-201ENST00000425537 UBR2Q8IWV8 1755 aa11.73□□□□□ -0.53
HMGB4-201ENST00000425537 USP44Q9H0E7 712 aa11.73□□□□□ -0.53
HMGB4-201ENST00000425537 C9orf78Q9NZ63 289 aaPredicted RBP11.73□□□□□ -0.53
HMGB4-201ENST00000425537 MAP3K2Q9Y2U5 619 aa11.73□□□□□ -0.53
HMGB4-201ENST00000425537 TOGARAM1Q9Y4F4 1720 aa11.72□□□□□ -0.53
HMGB4-201ENST00000425537 ADCY9O60503 1353 aa11.72□□□□□ -0.53
HMGB4-201ENST00000425537 DCAF8L1A6NGE4 600 aa11.72□□□□□ -0.53
HMGB4-201ENST00000425537 RAB11FIP3O75154 756 aa11.72□□□□□ -0.53
HMGB4-201ENST00000425537 HOXD11P31277 338 aaPredicted RBP11.72□□□□□ -0.53
HMGB4-201ENST00000425537 NPM2Q86SE8 214 aaKnown RBP11.72□□□□□ -0.53
HMGB4-201ENST00000425537 DAXXQ9UER7 740 aaPredicted RBP11.72□□□□□ -0.53
HMGB4-201ENST00000425537 SBF2Q86WG5 1849 aa11.72□□□□□ -0.53
HMGB4-201ENST00000425537 TNS1Q9HBL0 1735 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms