RNA–Protein interactions for RNA: ENST00000425049.1

SHANK2-207, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 4

Gene SHANK2, Length 557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-207ENST00000425049 RALBP1Q15311 655 aa22.01■■□□□ 1.11
SHANK2-207ENST00000425049 CANXP27824 592 aaKnown RBP22■■□□□ 1.11
SHANK2-207ENST00000425049 DDX10Q13206 875 aaKnown RBP22■■□□□ 1.11
SHANK2-207ENST00000425049 PNNQ9H307 717 aaKnown RBP22■■□□□ 1.11
SHANK2-207ENST00000425049 TGFB2P61812 414 aa21.99■■□□□ 1.11
SHANK2-207ENST00000425049 USPL1Q5W0Q7 1092 aa21.99■■□□□ 1.11
SHANK2-207ENST00000425049 MCM10Q7L590 875 aa21.99■■□□□ 1.11
SHANK2-207ENST00000425049 NPM2Q86SE8 214 aaKnown RBP21.99■■□□□ 1.11
SHANK2-207ENST00000425049 SIPA1L3O60292 1781 aaPredicted RBP21.99■■□□□ 1.11
SHANK2-207ENST00000425049 HTATSF1O43719 755 aaKnown RBP21.98■■□□□ 1.11
SHANK2-207ENST00000425049 NARFQ9UHQ1 456 aa21.98■■□□□ 1.11
SHANK2-207ENST00000425049 MAPK8IP3Q9UPT6 1336 aa21.98■■□□□ 1.11
SHANK2-207ENST00000425049 PXDNLA1KZ92 1463 aa21.97■■□□□ 1.11
SHANK2-207ENST00000425049 A0A087WZG4 1122 aa21.97■■□□□ 1.11
SHANK2-207ENST00000425049 ZNF330Q9Y3S2 320 aaPredicted RBP21.97■■□□□ 1.11
SHANK2-207ENST00000425049 KIF13BQ9NQT8 1826 aa21.95■■□□□ 1.1
SHANK2-207ENST00000425049 DDR1Q08345 913 aa21.95■■□□□ 1.1
SHANK2-207ENST00000425049 DCTN1Q14203 1278 aa21.95■■□□□ 1.1
SHANK2-207ENST00000425049 A0A0G2JLW4 131 aa21.94■■□□□ 1.1
SHANK2-207ENST00000425049 KCNQ3O43525 872 aa21.93■■□□□ 1.1
SHANK2-207ENST00000425049 DPEP1P16444 411 aa21.93■■□□□ 1.1
SHANK2-207ENST00000425049 BCS1LQ9Y276 419 aa21.93■■□□□ 1.1
SHANK2-207ENST00000425049 MYBBP1AQ9BQG0 1328 aaKnown RBP21.92■■□□□ 1.1
SHANK2-207ENST00000425049 POLRMTO00411 1230 aaKnown RBP21.92■■□□□ 1.1
SHANK2-207ENST00000425049 EIF5P55010 431 aaKnown RBP21.92■■□□□ 1.1
SHANK2-207ENST00000425049 SNRPA1P09661 255 aaKnown RBP21.91■■□□□ 1.1
SHANK2-207ENST00000425049 TM4SF1P30408 202 aa21.91■■□□□ 1.1
SHANK2-207ENST00000425049 IL6STP40189 918 aaPredicted RBP21.91■■□□□ 1.1
SHANK2-207ENST00000425049 NFIXQ14938 502 aa21.91■■□□□ 1.1
SHANK2-207ENST00000425049 NFE2L2Q16236 605 aa21.91■■□□□ 1.1
SHANK2-207ENST00000425049 TAF7Q15545 349 aaPredicted RBP21.9■■□□□ 1.1
SHANK2-207ENST00000425049 PLEKHF1Q96S99 279 aa21.9■■□□□ 1.1
SHANK2-207ENST00000425049 N4BP2Q86UW6 1770 aaPredicted RBP21.89■■□□□ 1.1
SHANK2-207ENST00000425049 A1BGP04217 495 aa21.89■■□□□ 1.09
SHANK2-207ENST00000425049 PNISRQ8TF01 805 aaKnown RBP21.89■■□□□ 1.09
SHANK2-207ENST00000425049 PIM2Q9P1W9 311 aa21.88■■□□□ 1.09
SHANK2-207ENST00000425049 KIAA1551Q9HCM1 1747 aa21.88■■□□□ 1.09
SHANK2-207ENST00000425049 BICDL1Q6ZP65 573 aa21.87■■□□□ 1.09
SHANK2-207ENST00000425049 BCL2L12Q9HB09 334 aa21.87■■□□□ 1.09
SHANK2-207ENST00000425049 TBC1D2BQ9UPU7 963 aa21.87■■□□□ 1.09
SHANK2-207ENST00000425049 SERPINB2P05120 415 aa21.86■■□□□ 1.09
SHANK2-207ENST00000425049 ATP10DQ9P241 1426 aa21.86■■□□□ 1.09
SHANK2-207ENST00000425049 SCN7AQ01118 1682 aa21.85■■□□□ 1.09
SHANK2-207ENST00000425049 GIGYF1O75420 1035 aaPredicted RBP21.85■■□□□ 1.09
SHANK2-207ENST00000425049 ZEB1P37275 1124 aaPredicted RBP21.85■■□□□ 1.09
SHANK2-207ENST00000425049 WDR43Q15061 677 aaKnown RBP eCLIP21.85■■□□□ 1.09
SHANK2-207ENST00000425049 DALRD3Q5D0E6 543 aaKnown RBP21.85■■□□□ 1.09
SHANK2-207ENST00000425049 USP16Q9Y5T5 823 aa21.85■■□□□ 1.09
SHANK2-207ENST00000425049 NPHP1O15259 732 aa21.84■■□□□ 1.09
SHANK2-207ENST00000425049 ARHGAP27Q6ZUM4 889 aa21.84■■□□□ 1.09
SHANK2-207ENST00000425049 DZIP3Q86Y13 1208 aaKnown RBP21.84■■□□□ 1.09
SHANK2-207ENST00000425049 MIS18AQ9NYP9 233 aa21.84■■□□□ 1.09
SHANK2-207ENST00000425049 DLG5Q8TDM6 1919 aa21.83■■□□□ 1.09
SHANK2-207ENST00000425049 PRAMEF22A3QJZ6 481 aa21.83■■□□□ 1.09
SHANK2-207ENST00000425049 CHRNA5P30532 468 aa21.83■■□□□ 1.09
SHANK2-207ENST00000425049 LMOD3Q0VAK6 560 aa21.83■■□□□ 1.09
SHANK2-207ENST00000425049 CARMIL3Q8ND23 1372 aa21.83■■□□□ 1.08
SHANK2-207ENST00000425049 PIP4K2AP48426 406 aaPredicted RBP21.82■■□□□ 1.08
SHANK2-207ENST00000425049 TBC1D9BQ66K14 1250 aa21.82■■□□□ 1.08
SHANK2-207ENST00000425049 THUMPD2Q9BTF0 503 aaKnown RBP21.82■■□□□ 1.08
SHANK2-207ENST00000425049 KCNA3P22001 575 aa21.81■■□□□ 1.08
SHANK2-207ENST00000425049 RIPK4P57078 832 aa21.81■■□□□ 1.08
SHANK2-207ENST00000425049 SETDB2Q96T68 719 aa21.81■■□□□ 1.08
SHANK2-207ENST00000425049 GPBP1L1Q9HC44 474 aaPredicted RBP21.81■■□□□ 1.08
SHANK2-207ENST00000425049 ZNF652Q9Y2D9 606 aa21.81■■□□□ 1.08
SHANK2-207ENST00000425049 ADCY9O60503 1353 aa21.81■■□□□ 1.08
SHANK2-207ENST00000425049 CAMTA2O94983 1202 aa21.8■■□□□ 1.08
SHANK2-207ENST00000425049 ZNF526Q8TF50 670 aaPredicted RBP21.8■■□□□ 1.08
SHANK2-207ENST00000425049 NRXN2Q9P2S2 1712 aa21.8■■□□□ 1.08
SHANK2-207ENST00000425049 BRCA1P38398 1863 aaKnown RBP21.79■■□□□ 1.08
SHANK2-207ENST00000425049 AFDNP55196 1824 aaKnown RBP21.79■■□□□ 1.08
SHANK2-207ENST00000425049 H0YIN7 160 aa21.78■■□□□ 1.08
SHANK2-207ENST00000425049 C2CD5Q86YS7 1000 aa21.78■■□□□ 1.08
SHANK2-207ENST00000425049 CNBD1Q8NA66 436 aa21.78■■□□□ 1.08
SHANK2-207ENST00000425049 TSPYL4Q9UJ04 414 aa21.78■■□□□ 1.08
SHANK2-207ENST00000425049 LAMB4A4D0S4 1761 aa21.77■■□□□ 1.08
SHANK2-207ENST00000425049 KDM3BQ7LBC6 1761 aa21.77■■□□□ 1.08
SHANK2-207ENST00000425049 TMPOP42166 694 aaKnown RBP21.77■■□□□ 1.08
SHANK2-207ENST00000425049 C1QTNF8P60827 252 aa21.77■■□□□ 1.08
SHANK2-207ENST00000425049 CCDC146Q8IYE0 955 aa21.77■■□□□ 1.08
SHANK2-207ENST00000425049 PRKRIP1Q9H875 184 aaPredicted RBP21.77■■□□□ 1.08
SHANK2-207ENST00000425049 EIF4A1P60842 406 aaKnown RBP21.76■■□□□ 1.07
SHANK2-207ENST00000425049 ST5P78524 1137 aa21.76■■□□□ 1.07
SHANK2-207ENST00000425049 CLEC4GQ6UXB4 293 aa21.76■■□□□ 1.07
SHANK2-207ENST00000425049 PDZRN3Q9UPQ7 1066 aa21.76■■□□□ 1.07
SHANK2-207ENST00000425049 BCORQ6W2J9 1755 aa21.76■■□□□ 1.07
SHANK2-207ENST00000425049 ARFGEF1Q9Y6D6 1849 aa21.76■■□□□ 1.07
SHANK2-207ENST00000425049 NBPF26B4DH59 902 aa21.75■■□□□ 1.07
SHANK2-207ENST00000425049 PDE6BP35913 854 aa21.75■■□□□ 1.07
SHANK2-207ENST00000425049 NBPF10Q6P3W6 841 aaKnown RBP21.75■■□□□ 1.07
SHANK2-207ENST00000425049 NBPF15Q8N660 670 aa21.75■■□□□ 1.07
SHANK2-207ENST00000425049 NEUROD2Q15784 382 aa21.74■■□□□ 1.07
SHANK2-207ENST00000425049 PRR5LQ6MZQ0 368 aa21.74■■□□□ 1.07
SHANK2-207ENST00000425049 TTLL6Q8N841 843 aa21.74■■□□□ 1.07
SHANK2-207ENST00000425049 RUNDC1Q96C34 613 aa21.74■■□□□ 1.07
SHANK2-207ENST00000425049 BRIP1Q9BX63 1249 aa21.74■■□□□ 1.07
SHANK2-207ENST00000425049 RRP7AQ9Y3A4 280 aaKnown RBP21.74■■□□□ 1.07
SHANK2-207ENST00000425049 NBPF5PQ86XG9 351 aaPredicted RBP21.73■■□□□ 1.07
SHANK2-207ENST00000425049 RGL2O15211 777 aa21.72■■□□□ 1.07
SHANK2-207ENST00000425049 KIF6Q6ZMV9 814 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms