RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 MRPL50Q8N5N7 158 aaKnown RBP17.25■□□□□ 0.35
PRPF39-202ENST00000424478 APBA3O96018 575 aa17.25■□□□□ 0.35
PRPF39-202ENST00000424478 SRCAPQ6ZRS2 3230 aa17.24■□□□□ 0.35
PRPF39-202ENST00000424478 RRP1P56182 461 aaKnown RBP17.24■□□□□ 0.35
PRPF39-202ENST00000424478 ARXQ96QS3 562 aa17.24■□□□□ 0.35
PRPF39-202ENST00000424478 NBPF26B4DH59 902 aa17.23■□□□□ 0.35
PRPF39-202ENST00000424478 NBPF14Q5TI25 921 aa17.23■□□□□ 0.35
PRPF39-202ENST00000424478 NBPF10Q6P3W6 841 aaKnown RBP17.23■□□□□ 0.35
PRPF39-202ENST00000424478 NBPF15Q8N660 670 aa17.23■□□□□ 0.35
PRPF39-202ENST00000424478 PANK1Q8TE04 598 aa17.23■□□□□ 0.35
PRPF39-202ENST00000424478 LRRC4BQ9NT99 713 aa17.23■□□□□ 0.35
PRPF39-202ENST00000424478 F6X3S4 739 aa17.23■□□□□ 0.35
PRPF39-202ENST00000424478 PDIA6Q15084 440 aa17.22■□□□□ 0.35
PRPF39-202ENST00000424478 CCDC30Q5VVM6 783 aa17.22■□□□□ 0.35
PRPF39-202ENST00000424478 CCNL1Q9UK58 526 aaPredicted RBP17.22■□□□□ 0.35
PRPF39-202ENST00000424478 RLBP1P12271 317 aa17.22■□□□□ 0.35
PRPF39-202ENST00000424478 LINC00116Q8NCU8 138 aa17.22■□□□□ 0.35
PRPF39-202ENST00000424478 STK31Q9BXU1 1019 aa17.22■□□□□ 0.35
PRPF39-202ENST00000424478 DEFB132Q7Z7B7 95 aa17.22■□□□□ 0.35
PRPF39-202ENST00000424478 ZBTB1Q9Y2K1 713 aa17.22■□□□□ 0.35
PRPF39-202ENST00000424478 TJP1Q07157 1748 aa17.21■□□□□ 0.35
PRPF39-202ENST00000424478 PROM2Q8N271 834 aa17.21■□□□□ 0.35
PRPF39-202ENST00000424478 AMIGO3Q86WK7 504 aa17.2■□□□□ 0.34
PRPF39-202ENST00000424478 CYP19A1P11511 503 aaPredicted RBP17.2■□□□□ 0.34
PRPF39-202ENST00000424478 EN1Q05925 392 aaPredicted RBP17.2■□□□□ 0.34
PRPF39-202ENST00000424478 MYH14Q7Z406 1995 aaKnown RBP17.2■□□□□ 0.34
PRPF39-202ENST00000424478 CT47B1P0C2W7 299 aaPredicted RBP17.19■□□□□ 0.34
PRPF39-202ENST00000424478 TRIM27P14373 513 aa17.19■□□□□ 0.34
PRPF39-202ENST00000424478 FKBP8Q14318 412 aa17.19■□□□□ 0.34
PRPF39-202ENST00000424478 SMARCC1Q92922 1105 aaPredicted RBP17.19■□□□□ 0.34
PRPF39-202ENST00000424478 FKBP5Q13451 457 aaPredicted RBP17.19■□□□□ 0.34
PRPF39-202ENST00000424478 ALDH1L2Q3SY69 923 aa17.19■□□□□ 0.34
PRPF39-202ENST00000424478 GOLGB1Q14789 3259 aaKnown RBP17.19■□□□□ 0.34
PRPF39-202ENST00000424478 CRKLP46109 303 aaKnown RBP17.18■□□□□ 0.34
PRPF39-202ENST00000424478 FLIIQ13045 1269 aa17.18■□□□□ 0.34
PRPF39-202ENST00000424478 DBF4Q9UBU7 674 aaPredicted RBP17.18■□□□□ 0.34
PRPF39-202ENST00000424478 SLC4A10Q6U841 1118 aa17.18■□□□□ 0.34
PRPF39-202ENST00000424478 TTLL7Q6ZT98 887 aa17.18■□□□□ 0.34
PRPF39-202ENST00000424478 XAGE3Q8WTP9 111 aa17.18■□□□□ 0.34
PRPF39-202ENST00000424478 LAMB4A4D0S4 1761 aa17.17■□□□□ 0.34
PRPF39-202ENST00000424478 ILDR2Q71H61 639 aa17.17■□□□□ 0.34
PRPF39-202ENST00000424478 COPS6Q7L5N1 327 aa17.17■□□□□ 0.34
PRPF39-202ENST00000424478 HOXB7P09629 217 aa17.17■□□□□ 0.34
PRPF39-202ENST00000424478 EZH2Q15910 746 aaKnown RBP17.17■□□□□ 0.34
PRPF39-202ENST00000424478 TXNRD1Q16881 649 aa17.17■□□□□ 0.34
PRPF39-202ENST00000424478 COG6Q9Y2V7 657 aa17.17■□□□□ 0.34
PRPF39-202ENST00000424478 TNS1Q9HBL0 1735 aaKnown RBP17.16■□□□□ 0.34
PRPF39-202ENST00000424478 STARD3NLO95772 234 aa17.16■□□□□ 0.34
PRPF39-202ENST00000424478 INTS5Q6P9B9 1019 aaKnown RBP17.16■□□□□ 0.34
PRPF39-202ENST00000424478 DDX21Q9NR30 783 aaKnown RBP eCLIP17.16■□□□□ 0.342e-13■□□□□ 9.6
PRPF39-202ENST00000424478 PHF14O94880 888 aa17.16■□□□□ 0.34
PRPF39-202ENST00000424478 ZKSCAN2Q63HK3 967 aa17.16■□□□□ 0.34
PRPF39-202ENST00000424478 LRP10Q7Z4F1 713 aa17.16■□□□□ 0.34
PRPF39-202ENST00000424478 VSIG10Q8N0Z9 540 aa17.16■□□□□ 0.34
PRPF39-202ENST00000424478 CRBNQ96SW2 442 aa17.16■□□□□ 0.34
PRPF39-202ENST00000424478 ZBTB3Q9H5J0 574 aa17.15■□□□□ 0.34
PRPF39-202ENST00000424478 TBC1D2BQ9UPU7 963 aa17.15■□□□□ 0.34
PRPF39-202ENST00000424478 GTF3C3Q9Y5Q9 886 aa17.15■□□□□ 0.34
PRPF39-202ENST00000424478 LY75O60449 1722 aa17.15■□□□□ 0.34
PRPF39-202ENST00000424478 RNF123Q5XPI4 1314 aa17.15■□□□□ 0.34
PRPF39-202ENST00000424478 ATF7IPQ6VMQ6 1270 aa17.15■□□□□ 0.34
PRPF39-202ENST00000424478 PI4KAP2A4QPH2 592 aa17.14■□□□□ 0.33
PRPF39-202ENST00000424478 PI4KAP1Q8N8J0 262 aa17.14■□□□□ 0.33
PRPF39-202ENST00000424478 EXOC6Q8TAG9 804 aa17.14■□□□□ 0.33
PRPF39-202ENST00000424478 FTSJ3Q8IY81 847 aaKnown RBP17.14■□□□□ 0.33
PRPF39-202ENST00000424478 TMEM57Q8N5G2 664 aa17.14■□□□□ 0.33
PRPF39-202ENST00000424478 CCDC87Q9NVE4 849 aa17.14■□□□□ 0.33
PRPF39-202ENST00000424478 KIF16BQ96L93 1317 aa17.13■□□□□ 0.33
PRPF39-202ENST00000424478 GNPATO15228 680 aa17.13■□□□□ 0.33
PRPF39-202ENST00000424478 COL5A3P25940 1745 aaPredicted RBP17.12■□□□□ 0.33
PRPF39-202ENST00000424478 TAF1LQ8IZX4 1826 aa17.12■□□□□ 0.33
PRPF39-202ENST00000424478 MAP3K2Q9Y2U5 619 aa17.12■□□□□ 0.33
PRPF39-202ENST00000424478 ITPRIPQ8IWB1 547 aa17.11■□□□□ 0.33
PRPF39-202ENST00000424478 DZIP1LQ8IYY4 767 aaKnown RBP17.11■□□□□ 0.33
PRPF39-202ENST00000424478 TEX13AQ9BXU3 409 aaPredicted RBP17.11■□□□□ 0.33
PRPF39-202ENST00000424478 HYPKQ9NX55 129 aa17.11■□□□□ 0.33
PRPF39-202ENST00000424478 ADCY9O60503 1353 aa17.11■□□□□ 0.33
PRPF39-202ENST00000424478 NEFLP07196 543 aa17.1■□□□□ 0.33
PRPF39-202ENST00000424478 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.1■□□□□ 0.33
PRPF39-202ENST00000424478 JARID2Q92833 1246 aaPredicted RBP17.1■□□□□ 0.33
PRPF39-202ENST00000424478 SOS1Q07889 1333 aaPredicted RBP17.1■□□□□ 0.33
PRPF39-202ENST00000424478 ATP5J2-PTCD1G3V325 749 aa17.1■□□□□ 0.33
PRPF39-202ENST00000424478 ZNF827Q17R98 1081 aa17.1■□□□□ 0.33
PRPF39-202ENST00000424478 SF3B2Q13435 895 aaKnown RBP17.1■□□□□ 0.33
PRPF39-202ENST00000424478 CWF19L2Q2TBE0 894 aaKnown RBP17.1■□□□□ 0.33
PRPF39-202ENST00000424478 RIC3Q7Z5B4 369 aa17.1■□□□□ 0.33
PRPF39-202ENST00000424478 HLFQ16534 295 aa17.09■□□□□ 0.33
PRPF39-202ENST00000424478 IPO8O15397 1037 aaKnown RBP17.09■□□□□ 0.33
PRPF39-202ENST00000424478 SRP68Q9UHB9 627 aaKnown RBP17.09■□□□□ 0.33
PRPF39-202ENST00000424478 PLSCR1O15162 318 aa17.08■□□□□ 0.33
PRPF39-202ENST00000424478 RTL5Q5HYW3 569 aaPredicted RBP17.08■□□□□ 0.33
PRPF39-202ENST00000424478 C4BP0C0L5 1744 aa17.08■□□□□ 0.33
PRPF39-202ENST00000424478 BRPF1P55201 1214 aaPredicted RBP17.08■□□□□ 0.32
PRPF39-202ENST00000424478 ANKRD13DQ6ZTN6 518 aa17.08■□□□□ 0.32
PRPF39-202ENST00000424478 AK7Q96M32 723 aa17.08■□□□□ 0.32
PRPF39-202ENST00000424478 CAMKK2Q96RR4 588 aa17.08■□□□□ 0.32
PRPF39-202ENST00000424478 ANO8Q9HCE9 1232 aaPredicted RBP17.08■□□□□ 0.32
PRPF39-202ENST00000424478 CACNA1FO60840 1977 aa17.08■□□□□ 0.32
PRPF39-202ENST00000424478 C1orf115Q9H7X2 142 aa17.08■□□□□ 0.32
PRPF39-202ENST00000424478 EIF5P55010 431 aaKnown RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms