RNA–Protein interactions for RNA: ENST00000423615.6

VNN3-206, Transcript of vanin 3, humanhuman

TSL 1 (best) BASIC

Gene VNN3, Length 1,021 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-206ENST00000423615 CHPF2Q9P2E5 772 aa13.4□□□□□ -0.26
VNN3-206ENST00000423615 ANKRD36CQ5JPF3 1778 aa13.4□□□□□ -0.26
VNN3-206ENST00000423615 SEPT12Q8IYM1 358 aa13.39□□□□□ -0.27
VNN3-206ENST00000423615 DZIP1LQ8IYY4 767 aaKnown RBP13.39□□□□□ -0.27
VNN3-206ENST00000423615 ASAP1Q9ULH1 1129 aa13.39□□□□□ -0.27
VNN3-206ENST00000423615 COG6Q9Y2V7 657 aa13.39□□□□□ -0.27
VNN3-206ENST00000423615 BCORQ6W2J9 1755 aa13.38□□□□□ -0.27
VNN3-206ENST00000423615 ANXA1P04083 346 aa13.38□□□□□ -0.27
VNN3-206ENST00000423615 SLC4A2P04920 1241 aa13.38□□□□□ -0.27
VNN3-206ENST00000423615 PRIM1P49642 420 aaKnown RBP13.38□□□□□ -0.27
VNN3-206ENST00000423615 ZNF772Q68DY9 489 aaPredicted RBP13.38□□□□□ -0.27
VNN3-206ENST00000423615 ATG3Q9NT62 314 aa13.38□□□□□ -0.27
VNN3-206ENST00000423615 PTPRCP08575 1304 aa13.38□□□□□ -0.27
VNN3-206ENST00000423615 IPO8O15397 1037 aaKnown RBP13.37□□□□□ -0.27
VNN3-206ENST00000423615 ONECUT3O60422 494 aaPredicted RBP13.37□□□□□ -0.27
VNN3-206ENST00000423615 PTCD1O75127 700 aaKnown RBP13.37□□□□□ -0.27
VNN3-206ENST00000423615 SNRPA1P09661 255 aaKnown RBP13.37□□□□□ -0.27
VNN3-206ENST00000423615 FLIIQ13045 1269 aa13.37□□□□□ -0.27
VNN3-206ENST00000423615 PROSER3Q2NL68 480 aa13.37□□□□□ -0.27
VNN3-206ENST00000423615 FAM182BQ5T319 152 aa13.37□□□□□ -0.27
VNN3-206ENST00000423615 TMEM57Q8N5G2 664 aa13.37□□□□□ -0.27
VNN3-206ENST00000423615 API5Q9BZZ5 524 aaKnown RBP13.37□□□□□ -0.27
VNN3-206ENST00000423615 PALLDQ8WX93 1383 aa13.36□□□□□ -0.27
VNN3-206ENST00000423615 MVPQ14764 893 aaKnown RBP13.36□□□□□ -0.27
VNN3-206ENST00000423615 ARHGAP45Q92619 1136 aa13.36□□□□□ -0.27
VNN3-206ENST00000423615 PPP4R2Q9NY27 417 aa13.36□□□□□ -0.27
VNN3-206ENST00000423615 SCN7AQ01118 1682 aa13.36□□□□□ -0.27
VNN3-206ENST00000423615 KCNQ2O43526 872 aa13.35□□□□□ -0.27
VNN3-206ENST00000423615 MS4A1P11836 297 aa13.35□□□□□ -0.27
VNN3-206ENST00000423615 RBM6P78332 1123 aaKnown RBP13.35□□□□□ -0.27
VNN3-206ENST00000423615 ITPRIPQ8IWB1 547 aa13.35□□□□□ -0.27
VNN3-206ENST00000423615 PHAXQ9H814 394 aaKnown RBP13.35□□□□□ -0.27
VNN3-206ENST00000423615 RGPD3A6NKT7 1758 aaPredicted RBP13.35□□□□□ -0.27
VNN3-206ENST00000423615 RGPD4Q7Z3J3 1758 aa13.35□□□□□ -0.27
VNN3-206ENST00000423615 MYH14Q7Z406 1995 aaKnown RBP13.34□□□□□ -0.27
VNN3-206ENST00000423615 ADCY9O60503 1353 aa13.34□□□□□ -0.27
VNN3-206ENST00000423615 PIP4K2AP48426 406 aaPredicted RBP13.34□□□□□ -0.27
VNN3-206ENST00000423615 FKBP5Q13451 457 aaPredicted RBP13.34□□□□□ -0.27
VNN3-206ENST00000423615 SLC4A9Q96Q91 983 aa13.34□□□□□ -0.27
VNN3-206ENST00000423615 DBF4Q9UBU7 674 aaPredicted RBP13.34□□□□□ -0.27
VNN3-206ENST00000423615 C4AP0C0L4 1744 aa13.33□□□□□ -0.27
VNN3-206ENST00000423615 C4BP0C0L5 1744 aa13.33□□□□□ -0.27
VNN3-206ENST00000423615 F6X3S4 739 aa13.33□□□□□ -0.28
VNN3-206ENST00000423615 PDIA6Q15084 440 aa13.33□□□□□ -0.28
VNN3-206ENST00000423615 B4GALNT3Q6L9W6 998 aa13.33□□□□□ -0.28
VNN3-206ENST00000423615 PTF1AQ7RTS3 328 aa13.33□□□□□ -0.28
VNN3-206ENST00000423615 DNAJC10Q8IXB1 793 aa13.33□□□□□ -0.28
VNN3-206ENST00000423615 RBM42Q9BTD8 480 aaKnown RBP13.33□□□□□ -0.28
VNN3-206ENST00000423615 DDX21Q9NR30 783 aaKnown RBP eCLIP13.33□□□□□ -0.28
VNN3-206ENST00000423615 RGS17Q9UGC6 210 aaPredicted RBP13.33□□□□□ -0.28
VNN3-206ENST00000423615 USP16Q9Y5T5 823 aa13.33□□□□□ -0.28
VNN3-206ENST00000423615 ERBB4Q15303 1308 aa13.33□□□□□ -0.28
VNN3-206ENST00000423615 ATP10DQ9P241 1426 aa13.32□□□□□ -0.28
VNN3-206ENST00000423615 LRP10Q7Z4F1 713 aa13.32□□□□□ -0.28
VNN3-206ENST00000423615 CHMP4AQ9BY43 222 aa13.32□□□□□ -0.28
VNN3-206ENST00000423615 MYL6BP14649 208 aa13.31□□□□□ -0.28
VNN3-206ENST00000423615 VSIG10Q8N0Z9 540 aa13.31□□□□□ -0.28
VNN3-206ENST00000423615 DDX19BQ9UMR2 479 aa13.31□□□□□ -0.28
VNN3-206ENST00000423615 TUBGCP6Q96RT7 1819 aa13.31□□□□□ -0.28
VNN3-206ENST00000423615 NUP98P52948 1817 aa13.3□□□□□ -0.28
VNN3-206ENST00000423615 NBPF26B4DH59 902 aa13.3□□□□□ -0.28
VNN3-206ENST00000423615 NBPF14Q5TI25 921 aa13.3□□□□□ -0.28
VNN3-206ENST00000423615 NBPF10Q6P3W6 841 aaKnown RBP13.3□□□□□ -0.28
VNN3-206ENST00000423615 POTEAQ6S8J7 498 aa13.3□□□□□ -0.28
VNN3-206ENST00000423615 KRT27Q7Z3Y8 459 aa13.3□□□□□ -0.28
VNN3-206ENST00000423615 NBPF15Q8N660 670 aa13.3□□□□□ -0.28
VNN3-206ENST00000423615 HYPKQ9NX55 129 aa13.3□□□□□ -0.28
VNN3-206ENST00000423615 INTS3Q68E01 1043 aaKnown RBP13.29□□□□□ -0.28
VNN3-206ENST00000423615 SLC4A10Q6U841 1118 aa13.29□□□□□ -0.28
VNN3-206ENST00000423615 XAGE3Q8WTP9 111 aa13.29□□□□□ -0.28
VNN3-206ENST00000423615 CCDC136Q96JN2 1154 aa13.29□□□□□ -0.28
VNN3-206ENST00000423615 UBR3Q6ZT12 1888 aa13.29□□□□□ -0.28
VNN3-206ENST00000423615 CASZ1Q86V15 1759 aa13.28□□□□□ -0.28
VNN3-206ENST00000423615 EP400Q96L91 3159 aa13.28□□□□□ -0.28
VNN3-206ENST00000423615 LOC102724428A0A0B4J2F2 783 aa13.28□□□□□ -0.28
VNN3-206ENST00000423615 A1BGP04217 495 aa13.28□□□□□ -0.28
VNN3-206ENST00000423615 RXRBP28702 533 aa13.28□□□□□ -0.28
VNN3-206ENST00000423615 SIK1P57059 783 aa13.28□□□□□ -0.28
VNN3-206ENST00000423615 ITPK1Q13572 414 aa13.28□□□□□ -0.28
VNN3-206ENST00000423615 SMARCC1Q92922 1105 aaPredicted RBP13.28□□□□□ -0.28
VNN3-206ENST00000423615 PI4KAP2A4QPH2 592 aa13.27□□□□□ -0.29
VNN3-206ENST00000423615 CYP19A1P11511 503 aaPredicted RBP13.27□□□□□ -0.29
VNN3-206ENST00000423615 AIMP1Q12904 312 aaKnown RBP13.27□□□□□ -0.29
VNN3-206ENST00000423615 PI4KAP1Q8N8J0 262 aa13.27□□□□□ -0.29
VNN3-206ENST00000423615 DNAAF4Q8WXU2 420 aa13.27□□□□□ -0.29
VNN3-206ENST00000423615 ZBTB1Q9Y2K1 713 aa13.27□□□□□ -0.29
VNN3-206ENST00000423615 LAMB2P55268 1798 aa13.27□□□□□ -0.29
VNN3-206ENST00000423615 ATP6V1AP38606 617 aa13.26□□□□□ -0.29
VNN3-206ENST00000423615 CCT4P50991 539 aaKnown RBP13.26□□□□□ -0.29
VNN3-206ENST00000423615 COPS6Q7L5N1 327 aa13.26□□□□□ -0.29
VNN3-206ENST00000423615 MEIS3Q99687 375 aa13.26□□□□□ -0.29
VNN3-206ENST00000423615 TEX13AQ9BXU3 409 aaPredicted RBP13.26□□□□□ -0.29
VNN3-206ENST00000423615 C1orf115Q9H7X2 142 aa13.26□□□□□ -0.29
VNN3-206ENST00000423615 MAP3K2Q9Y2U5 619 aa13.26□□□□□ -0.29
VNN3-206ENST00000423615 COL24A1Q17RW2 1714 aa13.25□□□□□ -0.29
VNN3-206ENST00000423615 KDM2BQ8NHM5 1336 aa13.25□□□□□ -0.29
VNN3-206ENST00000423615 STARD3NLO95772 234 aa13.25□□□□□ -0.29
VNN3-206ENST00000423615 DDX58O95786 925 aaKnown RBP13.25□□□□□ -0.29
VNN3-206ENST00000423615 FAM196AQ6ZSG2 479 aa13.25□□□□□ -0.29
VNN3-206ENST00000423615 TTLL7Q6ZT98 887 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms