RNA–Protein interactions for RNA: ENST00000423335.2

SHISA9-201, Transcript of shisa family member 9, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHISA9, Length 4,043 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA9-201ENST00000423335 SDSP20132 328 aa17.98■□□□□ 0.47
SHISA9-201ENST00000423335 MX1P20591 662 aa17.98■□□□□ 0.47
SHISA9-201ENST00000423335 CCAR2Q8N163 923 aaKnown RBP17.98■□□□□ 0.47
SHISA9-201ENST00000423335 SETD1BQ9UPS6 1966 aaKnown RBP17.98■□□□□ 0.47
SHISA9-201ENST00000423335 ZMYM4Q5VZL5 1548 aa17.98■□□□□ 0.47
SHISA9-201ENST00000423335 KCNQ3O43525 872 aa17.98■□□□□ 0.47
SHISA9-201ENST00000423335 TPM4P67936 248 aa17.98■□□□□ 0.47
SHISA9-201ENST00000423335 PPP1R42Q7Z4L9 355 aa17.98■□□□□ 0.47
SHISA9-201ENST00000423335 KDM5DQ9BY66 1539 aa17.97■□□□□ 0.47
SHISA9-201ENST00000423335 RRP9O43818 475 aaKnown RBP17.97■□□□□ 0.47
SHISA9-201ENST00000423335 PKNOX2Q96KN3 472 aa17.97■□□□□ 0.47
SHISA9-201ENST00000423335 FAM182BQ5T319 152 aa17.97■□□□□ 0.47
SHISA9-201ENST00000423335 JAKMIP1Q96N16 626 aaKnown RBP17.97■□□□□ 0.47
SHISA9-201ENST00000423335 BLMP54132 1417 aaPredicted RBP17.96■□□□□ 0.47
SHISA9-201ENST00000423335 FAM98CQ17RN3 349 aaKnown RBP17.96■□□□□ 0.47
SHISA9-201ENST00000423335 RRP12Q5JTH9 1297 aaKnown RBP17.96■□□□□ 0.47
SHISA9-201ENST00000423335 ABCF2Q9UG63 623 aa17.96■□□□□ 0.47
SHISA9-201ENST00000423335 RIMBP3CA6NJZ7 1639 aa17.96■□□□□ 0.47
SHISA9-201ENST00000423335 RIMBP3BA6NNM3 1639 aa17.96■□□□□ 0.47
SHISA9-201ENST00000423335 RIMBP3Q9UFD9 1639 aa17.96■□□□□ 0.47
SHISA9-201ENST00000423335 CLCN1P35523 988 aa17.96■□□□□ 0.47
SHISA9-201ENST00000423335 SNRKQ9NRH2 765 aa17.96■□□□□ 0.47
SHISA9-201ENST00000423335 HYPKQ9NX55 129 aa17.96■□□□□ 0.47
SHISA9-201ENST00000423335 ZNF771Q7L3S4 317 aaPredicted RBP17.95■□□□□ 0.46
SHISA9-201ENST00000423335 ZGPATQ8N5A5 531 aaKnown RBP17.95■□□□□ 0.46
SHISA9-201ENST00000423335 TTC22Q5TAA0 569 aa17.95■□□□□ 0.46
SHISA9-201ENST00000423335 LARP1BQ659C4 914 aaKnown RBP17.95■□□□□ 0.46
SHISA9-201ENST00000423335 USP25Q9UHP3 1055 aa17.95■□□□□ 0.46
SHISA9-201ENST00000423335 ZPR1O75312 459 aa17.95■□□□□ 0.46
SHISA9-201ENST00000423335 KLHL40Q2TBA0 621 aa17.95■□□□□ 0.46
SHISA9-201ENST00000423335 TTC39AQ5SRH9 613 aa17.95■□□□□ 0.46
SHISA9-201ENST00000423335 MRPL50Q8N5N7 158 aaKnown RBP17.95■□□□□ 0.46
SHISA9-201ENST00000423335 ATP6V1AP38606 617 aa17.95■□□□□ 0.46
SHISA9-201ENST00000423335 METTL24Q5JXM2 366 aa17.95■□□□□ 0.46
SHISA9-201ENST00000423335 CCDC83Q8IWF9 413 aa17.95■□□□□ 0.46
SHISA9-201ENST00000423335 CPLX1O14810 134 aa17.94■□□□□ 0.46
SHISA9-201ENST00000423335 SDF4Q9BRK5 362 aa17.94■□□□□ 0.46
SHISA9-201ENST00000423335 CYP46A1Q9Y6A2 500 aa17.94■□□□□ 0.46
SHISA9-201ENST00000423335 CASTP20810 708 aaKnown RBP17.94■□□□□ 0.46
SHISA9-201ENST00000423335 TRDNQ13061 729 aa17.94■□□□□ 0.46
SHISA9-201ENST00000423335 CAMK4Q16566 473 aa17.94■□□□□ 0.46
SHISA9-201ENST00000423335 PA2G4Q9UQ80 394 aaKnown RBP17.94■□□□□ 0.46
SHISA9-201ENST00000423335 RNMTO43148 476 aaKnown RBP17.94■□□□□ 0.46
SHISA9-201ENST00000423335 IDH1O75874 414 aaKnown RBP17.94■□□□□ 0.46
SHISA9-201ENST00000423335 CCDC158Q5M9N0 1113 aa17.93■□□□□ 0.46
SHISA9-201ENST00000423335 HOMER1Q86YM7 354 aa17.93■□□□□ 0.46
SHISA9-201ENST00000423335 OTUD7AQ8TE49 926 aaPredicted RBP17.93■□□□□ 0.46
SHISA9-201ENST00000423335 CFAP74Q9C0B2 1584 aa17.93■□□□□ 0.46
SHISA9-201ENST00000423335 PLEKHG1Q9ULL1 1385 aa17.93■□□□□ 0.46
SHISA9-201ENST00000423335 ZSCAN23Q3MJ62 389 aa17.93■□□□□ 0.46
SHISA9-201ENST00000423335 CCDC73Q6ZRK6 1079 aa17.93■□□□□ 0.46
SHISA9-201ENST00000423335 NOL10Q9BSC4 688 aaKnown RBP17.93■□□□□ 0.46
SHISA9-201ENST00000423335 IL16Q14005 1332 aa17.92■□□□□ 0.46
SHISA9-201ENST00000423335 A1BGP04217 495 aa17.92■□□□□ 0.46
SHISA9-201ENST00000423335 LRRFIP1Q32MZ4 808 aaKnown RBP17.92■□□□□ 0.46
SHISA9-201ENST00000423335 NFXL1Q6ZNB6 911 aa17.92■□□□□ 0.46
SHISA9-201ENST00000423335 DTNBO60941 627 aa17.92■□□□□ 0.46
SHISA9-201ENST00000423335 DHX16O60231 1041 aaKnown RBP17.91■□□□□ 0.46
SHISA9-201ENST00000423335 PRIM1P49642 420 aaKnown RBP17.91■□□□□ 0.46
SHISA9-201ENST00000423335 IL17REQ8NFR9 667 aa17.91■□□□□ 0.46
SHISA9-201ENST00000423335 ERC1Q8IUD2 1116 aa17.91■□□□□ 0.46
SHISA9-201ENST00000423335 NPHP4O75161 1426 aaPredicted RBP17.91■□□□□ 0.46
SHISA9-201ENST00000423335 SBNO1A3KN83 1393 aa17.91■□□□□ 0.46
SHISA9-201ENST00000423335 RALYLQ86SE5 291 aaKnown RBP17.91■□□□□ 0.46
SHISA9-201ENST00000423335 ZNF830Q96NB3 372 aaPredicted RBP17.91■□□□□ 0.46
SHISA9-201ENST00000423335 PRDM10Q9NQV6 1147 aa17.91■□□□□ 0.46
SHISA9-201ENST00000423335 IQSEC3Q9UPP2 1182 aaPredicted RBP17.9■□□□□ 0.46
SHISA9-201ENST00000423335 TPD52L1Q16890 204 aaPredicted RBP17.9■□□□□ 0.46
SHISA9-201ENST00000423335 PRPF40BQ6NWY9 871 aaKnown RBP17.9■□□□□ 0.46
SHISA9-201ENST00000423335 CCDC24Q8N4L8 307 aa17.9■□□□□ 0.46
SHISA9-201ENST00000423335 KIF1BPQ96EK5 621 aa17.9■□□□□ 0.46
SHISA9-201ENST00000423335 TMX3Q96JJ7 454 aa17.9■□□□□ 0.46
SHISA9-201ENST00000423335 A2ML1A8K2U0 1454 aa17.9■□□□□ 0.46
SHISA9-201ENST00000423335 RAB3GAP1Q15042 981 aa17.9■□□□□ 0.46
SHISA9-201ENST00000423335 IFIT5Q13325 482 aaKnown RBP17.89■□□□□ 0.46
SHISA9-201ENST00000423335 SIRT1Q96EB6 747 aa17.89■□□□□ 0.46
SHISA9-201ENST00000423335 ZNF496Q96IT1 587 aaPredicted RBP17.89■□□□□ 0.46
SHISA9-201ENST00000423335 PDRG1Q9NUG6 133 aa17.89■□□□□ 0.46
SHISA9-201ENST00000423335 MAP3K5Q99683 1374 aa17.89■□□□□ 0.46
SHISA9-201ENST00000423335 DDX11Q96FC9 970 aa17.89■□□□□ 0.45
SHISA9-201ENST00000423335 CCDC192P0DO97 292 aa17.89■□□□□ 0.45
SHISA9-201ENST00000423335 PSMA5P28066 241 aa17.89■□□□□ 0.45
SHISA9-201ENST00000423335 ZNF790Q6PG37 636 aa17.89■□□□□ 0.45
SHISA9-201ENST00000423335 SNX21Q969T3 373 aa17.89■□□□□ 0.45
SHISA9-201ENST00000423335 MAP7D2Q96T17 732 aa17.89■□□□□ 0.45
SHISA9-201ENST00000423335 LDHAL6AQ6ZMR3 332 aa17.88■□□□□ 0.45
SHISA9-201ENST00000423335 TNMDQ9H2S6 317 aa17.88■□□□□ 0.45
SHISA9-201ENST00000423335 ZBTB7BO15156 539 aaPredicted RBP17.88■□□□□ 0.45
SHISA9-201ENST00000423335 KRT85P78386 507 aa17.88■□□□□ 0.45
SHISA9-201ENST00000423335 LMBR1LQ6UX01 489 aa17.88■□□□□ 0.45
SHISA9-201ENST00000423335 DCAF5Q96JK2 942 aa17.88■□□□□ 0.45
SHISA9-201ENST00000423335 PES1O00541 588 aaKnown RBP17.88■□□□□ 0.45
SHISA9-201ENST00000423335 KDM5CP41229 1560 aa17.88■□□□□ 0.45
SHISA9-201ENST00000423335 CLTCL1P53675 1640 aa17.88■□□□□ 0.45
SHISA9-201ENST00000423335 PTPRCP08575 1304 aa17.88■□□□□ 0.45
SHISA9-201ENST00000423335 PPFIA3O75145 1194 aa17.88■□□□□ 0.45
SHISA9-201ENST00000423335 PDCP20941 246 aa17.88■□□□□ 0.45
SHISA9-201ENST00000423335 ZNF521Q96K83 1311 aa17.87■□□□□ 0.45
SHISA9-201ENST00000423335 SBNO2Q9Y2G9 1366 aa17.87■□□□□ 0.45
SHISA9-201ENST00000423335 KCNQ4P56696 695 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms